EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000011219 (Gene tree)
Gene ID: 102447906
Gene Symbol: BRIX1
Alias: -
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 14514 bases
Position: chrJH206968.1:614314-628827
Accession: 102447906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000012435	Brix	PF04427.18	1e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000012496	BRIX1-201	6259	XM_006116600	ENSPSIP00000012435	274 (aa)	XP_014425674	K7FWM5

Gene Model

Click here to download ENSPSIG00000011219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011219's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011219	BRIX1	99	81.181	ENSG00000113460	BRIX1	77	81.181	Homo_sapiens
ENSPSIG00000011219	BRIX1	96	78.327	ENSAPOG00000020334	bxdc2	77	78.327	Acanthochromis_polyacanthus
ENSPSIG00000011219	BRIX1	99	80.812	ENSAMEG00000003295	BRIX1	77	80.812	Ailuropoda_melanoleuca
ENSPSIG00000011219	BRIX1	96	77.186	ENSACIG00000017003	bxdc2	78	77.186	Amphilophus_citrinellus
ENSPSIG00000011219	BRIX1	96	78.327	ENSAOCG00000000941	bxdc2	77	78.327	Amphiprion_ocellaris
ENSPSIG00000011219	BRIX1	96	78.327	ENSAPEG00000017124	bxdc2	77	78.327	Amphiprion_percula
ENSPSIG00000011219	BRIX1	96	77.567	ENSATEG00000016635	bxdc2	77	77.567	Anabas_testudineus
ENSPSIG00000011219	BRIX1	95	81.081	ENSAPLG00000006647	BRIX1	87	81.081	Anas_platyrhynchos
ENSPSIG00000011219	BRIX1	99	84.615	ENSACAG00000008586	BRIX1	77	84.615	Anolis_carolinensis
ENSPSIG00000011219	BRIX1	99	77.660	ENSANAG00000022329	-	78	77.660	Aotus_nancymaae
ENSPSIG00000011219	BRIX1	99	71.691	ENSANAG00000010505	-	76	71.691	Aotus_nancymaae
ENSPSIG00000011219	BRIX1	96	77.186	ENSACLG00000005213	bxdc2	77	77.186	Astatotilapia_calliptera
ENSPSIG00000011219	BRIX1	97	73.962	ENSAMXG00000043121	bxdc2	77	73.962	Astyanax_mexicanus
ENSPSIG00000011219	BRIX1	99	81.919	ENSBTAG00000019211	BRIX1	77	81.919	Bos_taurus
ENSPSIG00000011219	BRIX1	70	54.639	WBGene00019678	K12H4.3	55	54.639	Caenorhabditis_elegans
ENSPSIG00000011219	BRIX1	99	78.676	ENSCJAG00000007390	-	77	78.676	Callithrix_jacchus
ENSPSIG00000011219	BRIX1	99	80.515	ENSCJAG00000018506	-	77	80.515	Callithrix_jacchus
ENSPSIG00000011219	BRIX1	99	76.753	ENSCAFG00000018797	BRIX1	76	76.753	Canis_familiaris
ENSPSIG00000011219	BRIX1	99	70.111	ENSCAFG00020016783	BRIX1	76	70.111	Canis_lupus_dingo
ENSPSIG00000011219	BRIX1	99	77.122	ENSCHIG00000015024	BRIX1	76	77.122	Capra_hircus
ENSPSIG00000011219	BRIX1	99	81.919	ENSTSYG00000002898	BRIX1	77	81.919	Carlito_syrichta
ENSPSIG00000011219	BRIX1	82	76.000	ENSCAPG00000009776	BRIX1	88	76.000	Cavia_aperea
ENSPSIG00000011219	BRIX1	99	80.074	ENSCPOG00000022064	BRIX1	78	80.074	Cavia_porcellus
ENSPSIG00000011219	BRIX1	99	80.882	ENSCCAG00000033405	BRIX1	77	80.882	Cebus_capucinus
ENSPSIG00000011219	BRIX1	99	80.812	ENSCATG00000037721	BRIX1	77	80.812	Cercocebus_atys
ENSPSIG00000011219	BRIX1	99	80.074	ENSCLAG00000008124	BRIX1	77	80.074	Chinchilla_lanigera
ENSPSIG00000011219	BRIX1	99	81.550	ENSCSAG00000017117	BRIX1	77	81.550	Chlorocebus_sabaeus
ENSPSIG00000011219	BRIX1	99	80.882	ENSCHOG00000001790	-	77	80.882	Choloepus_hoffmanni
ENSPSIG00000011219	BRIX1	99	64.706	ENSCHOG00000012227	-	77	64.706	Choloepus_hoffmanni
ENSPSIG00000011219	BRIX1	99	93.358	ENSCPBG00000021309	BRIX1	77	93.358	Chrysemys_picta_bellii
ENSPSIG00000011219	BRIX1	85	56.897	ENSCING00000001695	-	87	56.897	Ciona_intestinalis
ENSPSIG00000011219	BRIX1	85	55.794	ENSCSAVG00000008644	-	75	55.794	Ciona_savignyi
ENSPSIG00000011219	BRIX1	99	81.181	ENSCANG00000022969	BRIX1	76	81.181	Colobus_angolensis_palliatus
ENSPSIG00000011219	BRIX1	99	80.147	ENSCGRG00001007932	Brix1	77	80.147	Cricetulus_griseus_chok1gshd
ENSPSIG00000011219	BRIX1	99	80.147	ENSCGRG00000016743	Brix1	77	80.147	Cricetulus_griseus_crigri
ENSPSIG00000011219	BRIX1	97	73.606	ENSCSEG00000019821	bxdc2	78	73.606	Cynoglossus_semilaevis
ENSPSIG00000011219	BRIX1	96	75.665	ENSCVAG00000016942	bxdc2	77	75.665	Cyprinodon_variegatus
ENSPSIG00000011219	BRIX1	94	73.256	ENSDARG00000098935	bxdc2	68	71.970	Danio_rerio
ENSPSIG00000011219	BRIX1	99	80.147	ENSDNOG00000002878	BRIX1	77	80.147	Dasypus_novemcinctus
ENSPSIG00000011219	BRIX1	99	81.985	ENSDORG00000009369	Brix1	77	81.985	Dipodomys_ordii
ENSPSIG00000011219	BRIX1	76	58.491	FBgn0035524	CG11583	60	58.491	Drosophila_melanogaster
ENSPSIG00000011219	BRIX1	100	73.723	ENSETEG00000017329	-	77	73.723	Echinops_telfairi
ENSPSIG00000011219	BRIX1	99	74.170	ENSETEG00000017842	-	78	74.170	Echinops_telfairi
ENSPSIG00000011219	BRIX1	85	70.259	ENSEBUG00000007717	BRIX1	74	68.908	Eptatretus_burgeri
ENSPSIG00000011219	BRIX1	99	81.550	ENSEASG00005014968	BRIX1	77	81.550	Equus_asinus_asinus
ENSPSIG00000011219	BRIX1	99	81.550	ENSECAG00000000377	BRIX1	70	81.550	Equus_caballus
ENSPSIG00000011219	BRIX1	99	70.111	ENSEEUG00000008350	BRIX1	76	70.111	Erinaceus_europaeus
ENSPSIG00000011219	BRIX1	97	76.404	ENSELUG00000009050	bxdc2	75	76.404	Esox_lucius
ENSPSIG00000011219	BRIX1	99	80.443	ENSFCAG00000042465	BRIX1	77	80.443	Felis_catus
ENSPSIG00000011219	BRIX1	94	84.496	ENSFALG00000002106	BRIX1	75	83.088	Ficedula_albicollis
ENSPSIG00000011219	BRIX1	99	80.812	ENSFDAG00000018960	BRIX1	77	80.812	Fukomys_damarensis
ENSPSIG00000011219	BRIX1	96	77.947	ENSFHEG00000004488	bxdc2	77	77.947	Fundulus_heteroclitus
ENSPSIG00000011219	BRIX1	90	78.455	ENSGMOG00000002425	bxdc2	86	78.455	Gadus_morhua
ENSPSIG00000011219	BRIX1	94	85.603	ENSGALG00000003373	BRIX1	78	83.824	Gallus_gallus
ENSPSIG00000011219	BRIX1	90	77.642	ENSGAFG00000011947	bxdc2	77	75.665	Gambusia_affinis
ENSPSIG00000011219	BRIX1	97	73.308	ENSGACG00000016491	bxdc2	78	73.034	Gasterosteus_aculeatus
ENSPSIG00000011219	BRIX1	100	92.336	ENSGAGG00000011959	BRIX1	79	92.336	Gopherus_agassizii
ENSPSIG00000011219	BRIX1	99	81.181	ENSGGOG00000004225	BRIX1	77	81.181	Gorilla_gorilla
ENSPSIG00000011219	BRIX1	96	77.186	ENSHBUG00000017923	bxdc2	77	77.186	Haplochromis_burtoni
ENSPSIG00000011219	BRIX1	99	60.517	ENSHGLG00000002055	-	73	60.517	Heterocephalus_glaber_female
ENSPSIG00000011219	BRIX1	92	67.460	ENSHGLG00000000296	-	70	67.704	Heterocephalus_glaber_female
ENSPSIG00000011219	BRIX1	94	62.646	ENSHGLG00000010349	-	74	62.646	Heterocephalus_glaber_female
ENSPSIG00000011219	BRIX1	99	62.362	ENSHGLG00000017782	-	76	62.362	Heterocephalus_glaber_female
ENSPSIG00000011219	BRIX1	99	81.181	ENSHGLG00000004566	BRIX1	77	81.181	Heterocephalus_glaber_female
ENSPSIG00000011219	BRIX1	92	68.127	ENSHGLG00100000909	-	58	68.482	Heterocephalus_glaber_male
ENSPSIG00000011219	BRIX1	99	59.630	ENSHGLG00100001527	-	73	59.630	Heterocephalus_glaber_male
ENSPSIG00000011219	BRIX1	99	81.181	ENSHGLG00100002204	-	77	81.181	Heterocephalus_glaber_male
ENSPSIG00000011219	BRIX1	99	74.265	ENSHGLG00100000068	-	77	74.265	Heterocephalus_glaber_male
ENSPSIG00000011219	BRIX1	88	79.752	ENSHCOG00000011674	bxdc2	77	77.273	Hippocampus_comes
ENSPSIG00000011219	BRIX1	94	74.419	ENSIPUG00000015099	brix1	75	74.419	Ictalurus_punctatus
ENSPSIG00000011219	BRIX1	99	80.074	ENSSTOG00000009600	BRIX1	77	80.074	Ictidomys_tridecemlineatus
ENSPSIG00000011219	BRIX1	89	76.639	ENSJJAG00000004662	-	73	76.639	Jaculus_jaculus
ENSPSIG00000011219	BRIX1	99	75.277	ENSJJAG00000001423	-	77	75.277	Jaculus_jaculus
ENSPSIG00000011219	BRIX1	68	90.323	ENSJJAG00000001806	-	71	90.323	Jaculus_jaculus
ENSPSIG00000011219	BRIX1	99	70.956	ENSJJAG00000009708	-	79	70.956	Jaculus_jaculus
ENSPSIG00000011219	BRIX1	91	77.823	ENSKMAG00000014487	bxdc2	77	76.894	Kryptolebias_marmoratus
ENSPSIG00000011219	BRIX1	97	72.285	ENSLBEG00000018123	bxdc2	78	72.285	Labrus_bergylta
ENSPSIG00000011219	BRIX1	98	79.926	ENSLACG00000005971	BRIX1	78	80.669	Latimeria_chalumnae
ENSPSIG00000011219	BRIX1	90	80.972	ENSLOCG00000011774	bxdc2	76	79.468	Lepisosteus_oculatus
ENSPSIG00000011219	BRIX1	99	80.443	ENSLAFG00000007249	BRIX1	77	80.443	Loxodonta_africana
ENSPSIG00000011219	BRIX1	99	81.181	ENSMFAG00000033107	BRIX1	77	81.181	Macaca_fascicularis
ENSPSIG00000011219	BRIX1	99	81.181	ENSMMUG00000038794	BRIX1	77	81.181	Macaca_mulatta
ENSPSIG00000011219	BRIX1	99	81.181	ENSMNEG00000039324	BRIX1	77	81.181	Macaca_nemestrina
ENSPSIG00000011219	BRIX1	99	81.181	ENSMLEG00000041564	BRIX1	77	81.181	Mandrillus_leucophaeus
ENSPSIG00000011219	BRIX1	97	77.903	ENSMAMG00000015004	bxdc2	78	77.903	Mastacembelus_armatus
ENSPSIG00000011219	BRIX1	96	77.186	ENSMZEG00005019808	bxdc2	77	77.186	Maylandia_zebra
ENSPSIG00000011219	BRIX1	69	81.481	ENSMGAG00000003156	BRIX1	99	79.412	Meleagris_gallopavo
ENSPSIG00000011219	BRIX1	99	80.147	ENSMAUG00000014172	Brix1	91	80.147	Mesocricetus_auratus
ENSPSIG00000011219	BRIX1	99	80.812	ENSMICG00000005672	BRIX1	77	80.812	Microcebus_murinus
ENSPSIG00000011219	BRIX1	99	80.147	ENSMOCG00000018798	Brix1	77	80.147	Microtus_ochrogaster
ENSPSIG00000011219	BRIX1	97	76.779	ENSMMOG00000000861	bxdc2	79	76.779	Mola_mola
ENSPSIG00000011219	BRIX1	98	82.156	ENSMODG00000020386	BRIX1	76	82.528	Monodelphis_domestica
ENSPSIG00000011219	BRIX1	89	77.049	ENSMALG00000020437	bxdc2	78	77.049	Monopterus_albus
ENSPSIG00000011219	BRIX1	99	80.882	MGP_CAROLIEiJ_G0019665	Brix1	77	80.882	Mus_caroli
ENSPSIG00000011219	BRIX1	99	80.515	ENSMUSG00000022247	Brix1	77	80.515	Mus_musculus
ENSPSIG00000011219	BRIX1	99	80.515	MGP_SPRETEiJ_G0020562	Brix1	77	80.515	Mus_spretus
ENSPSIG00000011219	BRIX1	99	80.074	ENSMPUG00000015137	BRIX1	77	80.074	Mustela_putorius_furo
ENSPSIG00000011219	BRIX1	68	90.374	ENSMLUG00000029255	BRIX1	71	90.374	Myotis_lucifugus
ENSPSIG00000011219	BRIX1	98	81.041	ENSNGAG00000002585	-	78	81.041	Nannospalax_galili
ENSPSIG00000011219	BRIX1	99	81.919	ENSNGAG00000021812	-	77	81.919	Nannospalax_galili
ENSPSIG00000011219	BRIX1	96	77.186	ENSNBRG00000008850	bxdc2	73	77.186	Neolamprologus_brichardi
ENSPSIG00000011219	BRIX1	98	75.926	ENSNLEG00000032149	BRIX1	76	75.646	Nomascus_leucogenys
ENSPSIG00000011219	BRIX1	88	80.083	ENSMEUG00000016482	BRIX1	68	80.083	Notamacropus_eugenii
ENSPSIG00000011219	BRIX1	73	85.572	ENSOPRG00000012886	BRIX1	100	85.572	Ochotona_princeps
ENSPSIG00000011219	BRIX1	78	85.581	ENSODEG00000019171	-	74	85.581	Octodon_degus
ENSPSIG00000011219	BRIX1	89	61.633	ENSODEG00000002389	-	78	61.633	Octodon_degus
ENSPSIG00000011219	BRIX1	92	67.857	ENSODEG00000010997	-	75	66.176	Octodon_degus
ENSPSIG00000011219	BRIX1	96	77.186	ENSONIG00000007725	bxdc2	75	77.186	Oreochromis_niloticus
ENSPSIG00000011219	BRIX1	98	83.643	ENSOANG00000014525	-	90	83.643	Ornithorhynchus_anatinus
ENSPSIG00000011219	BRIX1	99	81.618	ENSOCUG00000014478	BRIX1	77	81.618	Oryctolagus_cuniculus
ENSPSIG00000011219	BRIX1	96	76.515	ENSORLG00000005895	bxdc2	78	76.515	Oryzias_latipes
ENSPSIG00000011219	BRIX1	96	76.515	ENSORLG00020005201	bxdc2	78	76.515	Oryzias_latipes_hni
ENSPSIG00000011219	BRIX1	96	76.136	ENSORLG00015011685	bxdc2	78	76.136	Oryzias_latipes_hsok
ENSPSIG00000011219	BRIX1	96	76.515	ENSOMEG00000007680	bxdc2	78	76.515	Oryzias_melastigma
ENSPSIG00000011219	BRIX1	99	81.181	ENSOGAG00000014827	BRIX1	77	81.181	Otolemur_garnettii
ENSPSIG00000011219	BRIX1	99	82.288	ENSOARG00000011539	BRIX1	77	82.288	Ovis_aries
ENSPSIG00000011219	BRIX1	99	81.181	ENSPPAG00000038183	BRIX1	77	81.181	Pan_paniscus
ENSPSIG00000011219	BRIX1	99	80.443	ENSPPRG00000023961	BRIX1	77	80.443	Panthera_pardus
ENSPSIG00000011219	BRIX1	99	80.443	ENSPTIG00000006466	BRIX1	77	80.443	Panthera_tigris_altaica
ENSPSIG00000011219	BRIX1	99	81.181	ENSPTRG00000016784	BRIX1	77	81.181	Pan_troglodytes
ENSPSIG00000011219	BRIX1	98	81.784	ENSPANG00000016504	BRIX1	75	81.784	Papio_anubis
ENSPSIG00000011219	BRIX1	89	83.128	ENSPKIG00000005920	bxdc2	65	79.468	Paramormyrops_kingsleyae
ENSPSIG00000011219	BRIX1	96	68.441	ENSPMGG00000022988	bxdc2	75	68.441	Periophthalmus_magnuspinnatus
ENSPSIG00000011219	BRIX1	99	79.779	ENSPEMG00000016920	Brix1	77	79.779	Peromyscus_maniculatus_bairdii
ENSPSIG00000011219	BRIX1	50	77.941	ENSPMAG00000004076	-	96	77.941	Petromyzon_marinus
ENSPSIG00000011219	BRIX1	98	82.528	ENSPCIG00000022778	BRIX1	76	82.528	Phascolarctos_cinereus
ENSPSIG00000011219	BRIX1	96	75.665	ENSPFOG00000008577	bxdc2	63	75.665	Poecilia_formosa
ENSPSIG00000011219	BRIX1	96	76.046	ENSPLAG00000006772	bxdc2	70	76.046	Poecilia_latipinna
ENSPSIG00000011219	BRIX1	96	75.665	ENSPMEG00000020229	bxdc2	70	75.665	Poecilia_mexicana
ENSPSIG00000011219	BRIX1	96	76.046	ENSPREG00000017461	bxdc2	70	76.046	Poecilia_reticulata
ENSPSIG00000011219	BRIX1	98	76.296	ENSPPYG00000015390	BRIX1	76	76.296	Pongo_abelii
ENSPSIG00000011219	BRIX1	99	80.443	ENSPCOG00000018281	-	77	80.443	Propithecus_coquereli
ENSPSIG00000011219	BRIX1	96	60.606	ENSPCOG00000016748	-	75	60.606	Propithecus_coquereli
ENSPSIG00000011219	BRIX1	99	75.646	ENSPVAG00000016925	BRIX1	90	75.646	Pteropus_vampyrus
ENSPSIG00000011219	BRIX1	96	77.186	ENSPNYG00000007707	bxdc2	77	77.186	Pundamilia_nyererei
ENSPSIG00000011219	BRIX1	90	78.455	ENSPNAG00000010431	bxdc2	78	73.723	Pygocentrus_nattereri
ENSPSIG00000011219	BRIX1	100	80.364	ENSRNOG00000018021	Brix1	78	80.364	Rattus_norvegicus
ENSPSIG00000011219	BRIX1	99	80.812	ENSRBIG00000042083	BRIX1	76	80.812	Rhinopithecus_bieti
ENSPSIG00000011219	BRIX1	99	81.181	ENSRROG00000031228	BRIX1	76	81.181	Rhinopithecus_roxellana
ENSPSIG00000011219	BRIX1	83	47.500	YOL077C	-	82	47.500	Saccharomyces_cerevisiae
ENSPSIG00000011219	BRIX1	99	81.250	ENSSBOG00000033290	-	77	81.250	Saimiri_boliviensis_boliviensis
ENSPSIG00000011219	BRIX1	99	79.412	ENSSBOG00000017845	-	77	79.412	Saimiri_boliviensis_boliviensis
ENSPSIG00000011219	BRIX1	92	83.794	ENSSHAG00000010794	BRIX1	76	82.222	Sarcophilus_harrisii
ENSPSIG00000011219	BRIX1	90	80.488	ENSSFOG00015022435	brix1	78	77.239	Scleropages_formosus
ENSPSIG00000011219	BRIX1	96	75.000	ENSSMAG00000005909	bxdc2	78	75.000	Scophthalmus_maximus
ENSPSIG00000011219	BRIX1	96	78.707	ENSSDUG00000016234	bxdc2	77	78.707	Seriola_dumerili
ENSPSIG00000011219	BRIX1	96	78.707	ENSSLDG00000007044	bxdc2	77	78.707	Seriola_lalandi_dorsalis
ENSPSIG00000011219	BRIX1	99	77.491	ENSSARG00000009879	BRIX1	75	77.491	Sorex_araneus
ENSPSIG00000011219	BRIX1	100	84.672	ENSSPUG00000019166	-	92	84.672	Sphenodon_punctatus
ENSPSIG00000011219	BRIX1	100	83.942	ENSSPUG00000000011	-	80	83.942	Sphenodon_punctatus
ENSPSIG00000011219	BRIX1	96	78.327	ENSSPAG00000006309	bxdc2	77	78.327	Stegastes_partitus
ENSPSIG00000011219	BRIX1	99	81.550	ENSSSCG00000016827	BRIX1	76	81.550	Sus_scrofa
ENSPSIG00000011219	BRIX1	94	84.496	ENSTGUG00000001961	BRIX1	78	83.088	Taeniopygia_guttata
ENSPSIG00000011219	BRIX1	97	76.779	ENSTRUG00000011403	bxdc2	78	76.779	Takifugu_rubripes
ENSPSIG00000011219	BRIX1	96	77.947	ENSTNIG00000007517	bxdc2	77	76.296	Tetraodon_nigroviridis
ENSPSIG00000011219	BRIX1	99	77.491	ENSTBEG00000011652	BRIX1	90	77.491	Tupaia_belangeri
ENSPSIG00000011219	BRIX1	99	80.812	ENSTTRG00000003262	BRIX1	77	80.812	Tursiops_truncatus
ENSPSIG00000011219	BRIX1	99	67.883	ENSUAMG00000022481	BRIX1	76	67.883	Ursus_americanus
ENSPSIG00000011219	BRIX1	99	80.812	ENSUMAG00000012900	BRIX1	77	80.812	Ursus_maritimus
ENSPSIG00000011219	BRIX1	99	71.587	ENSVVUG00000022099	BRIX1	76	71.587	Vulpes_vulpes
ENSPSIG00000011219	BRIX1	98	77.695	ENSXETG00000000703	brix1	79	77.695	Xenopus_tropicalis
ENSPSIG00000011219	BRIX1	96	76.426	ENSXCOG00000002461	bxdc2	77	76.426	Xiphophorus_couchianus
ENSPSIG00000011219	BRIX1	96	76.426	ENSXMAG00000004284	bxdc2	66	76.426	Xiphophorus_maculatus