EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000011408 (Gene tree)
Gene ID: 102463803
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 17460 bases
Position: chrJH207900.1:4580164-4597623
Accession: 102463803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000012830	RTC	PF01137.21	2.3e-86	1	1
ENSPSIP00000012830	RTC_insert	PF05189.13	5.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000012891	RTCA-201	3962	XM_006119813	ENSPSIP00000012830	365 (aa)	XP_006119875	K7FXS0

Gene Model

Click here to download ENSPSIG00000011408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011408	RTCA	100	84.426	ENSG00000137996	RTCA	100	84.426	Homo_sapiens
ENSPSIG00000011408	RTCA	100	68.219	ENSAPOG00000001345	rtca	99	68.219	Acanthochromis_polyacanthus
ENSPSIG00000011408	RTCA	73	82.528	ENSAMEG00000008855	RTCA	100	82.528	Ailuropoda_melanoleuca
ENSPSIG00000011408	RTCA	100	67.123	ENSACIG00000019643	rtca	100	67.123	Amphilophus_citrinellus
ENSPSIG00000011408	RTCA	100	68.493	ENSAOCG00000014979	rtca	99	68.493	Amphiprion_ocellaris
ENSPSIG00000011408	RTCA	100	68.493	ENSAPEG00000006945	rtca	99	68.493	Amphiprion_percula
ENSPSIG00000011408	RTCA	100	65.753	ENSATEG00000006315	rtca	100	65.753	Anabas_testudineus
ENSPSIG00000011408	RTCA	96	85.836	ENSAPLG00000015430	RTCA	100	85.836	Anas_platyrhynchos
ENSPSIG00000011408	RTCA	100	82.787	ENSANAG00000025446	RTCA	100	82.787	Aotus_nancymaae
ENSPSIG00000011408	RTCA	100	66.575	ENSACLG00000020770	rtca	99	66.575	Astatotilapia_calliptera
ENSPSIG00000011408	RTCA	98	70.195	ENSAMXG00000043271	rtca	98	70.195	Astyanax_mexicanus
ENSPSIG00000011408	RTCA	100	85.246	ENSBTAG00000006321	RTCA	100	85.246	Bos_taurus
ENSPSIG00000011408	RTCA	100	83.060	ENSCJAG00000003398	RTCA	100	83.060	Callithrix_jacchus
ENSPSIG00000011408	RTCA	100	84.153	ENSCAFG00000020010	RTCA	68	84.153	Canis_familiaris
ENSPSIG00000011408	RTCA	100	84.153	ENSCAFG00020011528	RTCA	57	84.153	Canis_lupus_dingo
ENSPSIG00000011408	RTCA	100	84.973	ENSCHIG00000018937	RTCA	100	84.973	Capra_hircus
ENSPSIG00000011408	RTCA	100	82.787	ENSTSYG00000011305	RTCA	100	82.787	Carlito_syrichta
ENSPSIG00000011408	RTCA	100	83.060	ENSCCAG00000021844	RTCA	99	84.084	Cebus_capucinus
ENSPSIG00000011408	RTCA	100	80.739	ENSCATG00000019364	RTCA	100	83.172	Cercocebus_atys
ENSPSIG00000011408	RTCA	87	83.861	ENSCLAG00000006125	RTCA	100	83.861	Chinchilla_lanigera
ENSPSIG00000011408	RTCA	100	83.880	ENSCSAG00000001509	RTCA	100	83.880	Chlorocebus_sabaeus
ENSPSIG00000011408	RTCA	100	84.699	ENSCHOG00000005211	RTCA	100	84.699	Choloepus_hoffmanni
ENSPSIG00000011408	RTCA	100	96.438	ENSCPBG00000026658	RTCA	100	96.438	Chrysemys_picta_bellii
ENSPSIG00000011408	RTCA	99	54.121	ENSCING00000007875	-	99	54.121	Ciona_intestinalis
ENSPSIG00000011408	RTCA	99	53.297	ENSCSAVG00000007269	-	99	53.297	Ciona_savignyi
ENSPSIG00000011408	RTCA	100	83.607	ENSCANG00000040106	RTCA	100	83.607	Colobus_angolensis_palliatus
ENSPSIG00000011408	RTCA	73	82.900	ENSCGRG00001013163	Rtca	85	82.900	Cricetulus_griseus_chok1gshd
ENSPSIG00000011408	RTCA	98	66.017	ENSCSEG00000000530	rtca	96	66.017	Cynoglossus_semilaevis
ENSPSIG00000011408	RTCA	100	55.978	ENSCVAG00000021809	rtca	100	55.978	Cyprinodon_variegatus
ENSPSIG00000011408	RTCA	100	70.137	ENSDARG00000002215	rtca	100	70.137	Danio_rerio
ENSPSIG00000011408	RTCA	100	84.153	ENSDNOG00000000456	RTCA	100	84.153	Dasypus_novemcinctus
ENSPSIG00000011408	RTCA	100	83.060	ENSDORG00000005448	Rtca	100	83.060	Dipodomys_ordii
ENSPSIG00000011408	RTCA	99	39.945	FBgn0025630	Rtca	99	39.945	Drosophila_melanogaster
ENSPSIG00000011408	RTCA	93	56.268	ENSEBUG00000008556	rtca	94	56.268	Eptatretus_burgeri
ENSPSIG00000011408	RTCA	100	84.699	ENSEASG00005015926	RTCA	100	84.699	Equus_asinus_asinus
ENSPSIG00000011408	RTCA	100	84.699	ENSECAG00000019831	RTCA	100	84.699	Equus_caballus
ENSPSIG00000011408	RTCA	91	74.855	ENSEEUG00000001165	RTCA	100	74.855	Erinaceus_europaeus
ENSPSIG00000011408	RTCA	99	66.944	ENSELUG00000003741	rtca	99	66.944	Esox_lucius
ENSPSIG00000011408	RTCA	100	84.426	ENSFCAG00000024460	RTCA	100	84.426	Felis_catus
ENSPSIG00000011408	RTCA	91	90.390	ENSFALG00000002443	RTCA	90	90.390	Ficedula_albicollis
ENSPSIG00000011408	RTCA	100	83.333	ENSFDAG00000012070	-	100	83.333	Fukomys_damarensis
ENSPSIG00000011408	RTCA	98	66.298	ENSFDAG00000016084	-	100	66.298	Fukomys_damarensis
ENSPSIG00000011408	RTCA	55	68.159	ENSFHEG00000002868	rtca	92	64.977	Fundulus_heteroclitus
ENSPSIG00000011408	RTCA	100	66.301	ENSGMOG00000013264	rtca	100	66.301	Gadus_morhua
ENSPSIG00000011408	RTCA	100	89.589	ENSGALG00000005277	RTCA	100	89.589	Gallus_gallus
ENSPSIG00000011408	RTCA	100	67.671	ENSGAFG00000011853	rtca	99	67.671	Gambusia_affinis
ENSPSIG00000011408	RTCA	100	66.301	ENSGACG00000013497	rtca	100	66.301	Gasterosteus_aculeatus
ENSPSIG00000011408	RTCA	80	95.904	ENSGAGG00000023306	RTCA	100	95.904	Gopherus_agassizii
ENSPSIG00000011408	RTCA	100	83.880	ENSGGOG00000009546	-	100	83.880	Gorilla_gorilla
ENSPSIG00000011408	RTCA	100	83.333	ENSGGOG00000044018	-	100	83.333	Gorilla_gorilla
ENSPSIG00000011408	RTCA	100	66.575	ENSHBUG00000002114	rtca	99	66.575	Haplochromis_burtoni
ENSPSIG00000011408	RTCA	100	82.240	ENSHGLG00000002617	RTCA	100	82.240	Heterocephalus_glaber_female
ENSPSIG00000011408	RTCA	100	82.240	ENSHGLG00100006056	RTCA	100	82.240	Heterocephalus_glaber_male
ENSPSIG00000011408	RTCA	100	61.644	ENSHCOG00000020628	rtca	89	61.644	Hippocampus_comes
ENSPSIG00000011408	RTCA	100	69.589	ENSIPUG00000024803	rtca	100	69.589	Ictalurus_punctatus
ENSPSIG00000011408	RTCA	100	77.596	ENSSTOG00000013528	-	100	77.596	Ictidomys_tridecemlineatus
ENSPSIG00000011408	RTCA	100	73.224	ENSSTOG00000033099	-	100	73.224	Ictidomys_tridecemlineatus
ENSPSIG00000011408	RTCA	100	60.656	ENSJJAG00000016178	Rtca	100	60.656	Jaculus_jaculus
ENSPSIG00000011408	RTCA	100	68.219	ENSKMAG00000006651	rtca	99	68.219	Kryptolebias_marmoratus
ENSPSIG00000011408	RTCA	88	65.000	ENSLBEG00000002448	-	99	65.000	Labrus_bergylta
ENSPSIG00000011408	RTCA	99	65.833	ENSLBEG00000028971	rtca	99	65.833	Labrus_bergylta
ENSPSIG00000011408	RTCA	100	74.247	ENSLACG00000013666	RTCA	100	74.247	Latimeria_chalumnae
ENSPSIG00000011408	RTCA	100	69.315	ENSLOCG00000000093	rtca	99	69.315	Lepisosteus_oculatus
ENSPSIG00000011408	RTCA	100	85.246	ENSLAFG00000001473	RTCA	100	85.246	Loxodonta_africana
ENSPSIG00000011408	RTCA	100	83.880	ENSMFAG00000034132	RTCA	100	83.880	Macaca_fascicularis
ENSPSIG00000011408	RTCA	100	83.333	ENSMMUG00000019105	RTCA	100	83.333	Macaca_mulatta
ENSPSIG00000011408	RTCA	84	83.495	ENSMNEG00000037163	RTCA	100	83.495	Macaca_nemestrina
ENSPSIG00000011408	RTCA	100	68.852	ENSMLEG00000042151	RTCA	100	68.852	Mandrillus_leucophaeus
ENSPSIG00000011408	RTCA	100	69.041	ENSMAMG00000016536	rtca	100	69.041	Mastacembelus_armatus
ENSPSIG00000011408	RTCA	100	66.575	ENSMZEG00005017945	rtca	99	66.575	Maylandia_zebra
ENSPSIG00000011408	RTCA	87	86.792	ENSMGAG00000006892	RTCA	99	86.792	Meleagris_gallopavo
ENSPSIG00000011408	RTCA	100	82.787	ENSMAUG00000008488	Rtca	100	82.787	Mesocricetus_auratus
ENSPSIG00000011408	RTCA	84	84.466	ENSMICG00000008643	RTCA	100	84.466	Microcebus_murinus
ENSPSIG00000011408	RTCA	100	82.514	ENSMOCG00000016660	Rtca	100	82.514	Microtus_ochrogaster
ENSPSIG00000011408	RTCA	84	67.208	ENSMMOG00000007750	rtca	100	67.208	Mola_mola
ENSPSIG00000011408	RTCA	100	84.973	ENSMODG00000003557	RTCA	100	84.973	Monodelphis_domestica
ENSPSIG00000011408	RTCA	100	68.493	ENSMALG00000020844	rtca	100	68.493	Monopterus_albus
ENSPSIG00000011408	RTCA	100	83.607	MGP_CAROLIEiJ_G0025565	Rtca	100	83.803	Mus_caroli
ENSPSIG00000011408	RTCA	100	83.333	ENSMUSG00000000339	Rtca	100	83.803	Mus_musculus
ENSPSIG00000011408	RTCA	100	83.333	MGP_PahariEiJ_G0027011	Rtca	100	83.333	Mus_pahari
ENSPSIG00000011408	RTCA	100	83.333	MGP_SPRETEiJ_G0026515	Rtca	100	83.333	Mus_spretus
ENSPSIG00000011408	RTCA	100	84.153	ENSMPUG00000012119	RTCA	100	84.153	Mustela_putorius_furo
ENSPSIG00000011408	RTCA	100	79.564	ENSMLUG00000009922	RTCA	100	79.564	Myotis_lucifugus
ENSPSIG00000011408	RTCA	100	82.787	ENSNGAG00000011540	Rtca	99	82.787	Nannospalax_galili
ENSPSIG00000011408	RTCA	100	66.575	ENSNBRG00000003062	rtca	99	66.575	Neolamprologus_brichardi
ENSPSIG00000011408	RTCA	100	84.153	ENSNLEG00000031426	RTCA	100	84.153	Nomascus_leucogenys
ENSPSIG00000011408	RTCA	73	79.554	ENSOPRG00000012092	RTCA	71	79.554	Ochotona_princeps
ENSPSIG00000011408	RTCA	95	84.483	ENSODEG00000006990	RTCA	96	84.615	Octodon_degus
ENSPSIG00000011408	RTCA	100	66.575	ENSONIG00000007753	rtca	99	66.575	Oreochromis_niloticus
ENSPSIG00000011408	RTCA	87	82.650	ENSOANG00000012055	RTCA	98	82.650	Ornithorhynchus_anatinus
ENSPSIG00000011408	RTCA	100	84.973	ENSOCUG00000014247	RTCA	100	84.973	Oryctolagus_cuniculus
ENSPSIG00000011408	RTCA	100	67.945	ENSORLG00000013605	rtca	100	67.945	Oryzias_latipes
ENSPSIG00000011408	RTCA	100	67.945	ENSORLG00020001904	rtca	100	67.945	Oryzias_latipes_hni
ENSPSIG00000011408	RTCA	100	67.671	ENSORLG00015021064	rtca	100	67.671	Oryzias_latipes_hsok
ENSPSIG00000011408	RTCA	100	69.315	ENSOMEG00000000756	rtca	100	69.315	Oryzias_melastigma
ENSPSIG00000011408	RTCA	100	75.410	ENSOGAG00000005627	RTCA	100	75.410	Otolemur_garnettii
ENSPSIG00000011408	RTCA	87	84.277	ENSOARG00000018122	RTCA	100	84.277	Ovis_aries
ENSPSIG00000011408	RTCA	100	81.266	ENSPPAG00000035119	RTCA	100	83.819	Pan_paniscus
ENSPSIG00000011408	RTCA	100	84.153	ENSPPRG00000000350	RTCA	100	84.153	Panthera_pardus
ENSPSIG00000011408	RTCA	100	84.153	ENSPTIG00000012816	RTCA	100	84.153	Panthera_tigris_altaica
ENSPSIG00000011408	RTCA	100	80.739	ENSPTRG00000001004	RTCA	100	83.172	Pan_troglodytes
ENSPSIG00000011408	RTCA	100	84.153	ENSPANG00000000346	RTCA	100	84.153	Papio_anubis
ENSPSIG00000011408	RTCA	100	69.863	ENSPKIG00000001653	rtca	100	69.863	Paramormyrops_kingsleyae
ENSPSIG00000011408	RTCA	100	83.060	ENSPEMG00000018582	Rtca	100	83.060	Peromyscus_maniculatus_bairdii
ENSPSIG00000011408	RTCA	99	55.402	ENSPMAG00000009110	rtca	99	54.945	Petromyzon_marinus
ENSPSIG00000011408	RTCA	100	85.519	ENSPCIG00000007684	RTCA	100	85.519	Phascolarctos_cinereus
ENSPSIG00000011408	RTCA	100	68.033	ENSPFOG00000004824	rtca	100	68.033	Poecilia_formosa
ENSPSIG00000011408	RTCA	100	68.219	ENSPLAG00000011753	rtca	99	68.219	Poecilia_latipinna
ENSPSIG00000011408	RTCA	100	68.219	ENSPMEG00000020469	rtca	99	68.219	Poecilia_mexicana
ENSPSIG00000011408	RTCA	100	69.041	ENSPREG00000001365	rtca	99	69.041	Poecilia_reticulata
ENSPSIG00000011408	RTCA	100	83.880	ENSPPYG00000001115	RTCA	100	83.880	Pongo_abelii
ENSPSIG00000011408	RTCA	99	81.994	ENSPCAG00000005076	RTCA	99	81.994	Procavia_capensis
ENSPSIG00000011408	RTCA	100	84.699	ENSPCOG00000005603	RTCA	100	84.699	Propithecus_coquereli
ENSPSIG00000011408	RTCA	100	80.475	ENSPVAG00000009478	RTCA	100	80.475	Pteropus_vampyrus
ENSPSIG00000011408	RTCA	100	66.575	ENSPNYG00000004722	rtca	99	66.575	Pundamilia_nyererei
ENSPSIG00000011408	RTCA	100	70.411	ENSPNAG00000022270	rtca	100	70.411	Pygocentrus_nattereri
ENSPSIG00000011408	RTCA	100	83.333	ENSRNOG00000014575	Rtca	100	83.333	Rattus_norvegicus
ENSPSIG00000011408	RTCA	100	80.475	ENSRBIG00000041180	RTCA	100	82.848	Rhinopithecus_bieti
ENSPSIG00000011408	RTCA	100	83.333	ENSRROG00000024929	RTCA	100	83.333	Rhinopithecus_roxellana
ENSPSIG00000011408	RTCA	100	83.060	ENSSBOG00000028626	RTCA	100	83.060	Saimiri_boliviensis_boliviensis
ENSPSIG00000011408	RTCA	100	86.066	ENSSHAG00000001758	RTCA	100	86.066	Sarcophilus_harrisii
ENSPSIG00000011408	RTCA	98	66.574	ENSSMAG00000014680	rtca	97	66.574	Scophthalmus_maximus
ENSPSIG00000011408	RTCA	98	67.967	ENSSDUG00000015585	rtca	97	67.967	Seriola_dumerili
ENSPSIG00000011408	RTCA	96	67.714	ENSSLDG00000018985	rtca	95	67.714	Seriola_lalandi_dorsalis
ENSPSIG00000011408	RTCA	87	79.811	ENSSARG00000013993	RTCA	100	79.811	Sorex_araneus
ENSPSIG00000011408	RTCA	100	67.397	ENSSPAG00000011938	rtca	99	67.397	Stegastes_partitus
ENSPSIG00000011408	RTCA	100	84.973	ENSSSCG00000006865	RTCA	100	84.973	Sus_scrofa
ENSPSIG00000011408	RTCA	100	89.863	ENSTGUG00000005154	RTCA	100	89.863	Taeniopygia_guttata
ENSPSIG00000011408	RTCA	100	67.123	ENSTRUG00000008799	rtca	100	67.123	Takifugu_rubripes
ENSPSIG00000011408	RTCA	100	66.301	ENSTNIG00000004725	rtca	100	66.301	Tetraodon_nigroviridis
ENSPSIG00000011408	RTCA	59	74.545	ENSTBEG00000000943	RTCA	82	57.143	Tupaia_belangeri
ENSPSIG00000011408	RTCA	100	80.211	ENSTTRG00000015327	RTCA	100	80.211	Tursiops_truncatus
ENSPSIG00000011408	RTCA	94	82.799	ENSUAMG00000017265	RTCA	96	82.799	Ursus_americanus
ENSPSIG00000011408	RTCA	100	83.607	ENSUMAG00000007881	RTCA	100	83.607	Ursus_maritimus
ENSPSIG00000011408	RTCA	87	74.763	ENSVPAG00000001039	RTCA	84	74.763	Vicugna_pacos
ENSPSIG00000011408	RTCA	100	83.880	ENSVVUG00000022041	RTCA	68	83.880	Vulpes_vulpes
ENSPSIG00000011408	RTCA	99	62.670	ENSXETG00000031661	RTCA	99	62.670	Xenopus_tropicalis
ENSPSIG00000011408	RTCA	100	59.726	ENSXCOG00000008002	rtca	100	59.726	Xiphophorus_couchianus
ENSPSIG00000011408	RTCA	100	67.945	ENSXMAG00000005482	rtca	99	67.945	Xiphophorus_maculatus