EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPSIG00000011608 (Gene tree)
Gene ID
102458927
Gene Symbol
-
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Plus strand
Length
64948 bases
Position
chrJH210444.1:98686-163633
Accession
102458927
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000012904RRM_1PF00076.221.6e-3412
ENSPSIP00000012904RRM_1PF00076.221.6e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000012966-2132XM_006129066ENSPSIP00000012904348 (aa)-K7FXZ4
Gene Model
Click here to download ENSPSIG00000011608's gene model file
Pathways
Pathway IDPathway NameSource
pss03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011608's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPSIG00000011608-9279.487ENSPSIG00000008618MSI29759.645
ENSPSIG00000011608-5142.135ENSPSIG00000003011HNRNPA39136.782
ENSPSIG00000011608-5548.214ENSPSIG00000010617HNRNPAB8446.409
ENSPSIG00000011608-5942.512ENSPSIG00000002760DAZAP15242.512
ENSPSIG00000011608-5141.899ENSPSIG00000004486-7037.433
ENSPSIG00000011608-6534.146ENSPSIG00000011649RBM385834.146
ENSPSIG00000011608-5342.162ENSPSIG00000002659HNRNPA2B16941.573
ENSPSIG00000011608-7787.719ENSPSIG00000009621-10087.281
ENSPSIG00000011608-5042.938ENSPSIG00000000035-6942.077
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000011608-9392.105ENSG00000135097MSI19892.105Homo_sapiens
ENSPSIG00000011608-9386.544ENSAPOG00000003191MSI19486.544Acanthochromis_polyacanthus
ENSPSIG00000011608-9386.018ENSAPOG00000023458-9486.018Acanthochromis_polyacanthus
ENSPSIG00000011608-93100.000ENSAMEG00000013302MSI179100.000Ailuropoda_melanoleuca
ENSPSIG00000011608-9084.068ENSACIG00000017754-8077.448Amphilophus_citrinellus
ENSPSIG00000011608-9382.609ENSAOCG00000009031-9682.919Amphiprion_ocellaris
ENSPSIG00000011608-9386.544ENSAOCG00000003804MSI19486.544Amphiprion_ocellaris
ENSPSIG00000011608-9386.544ENSAPEG00000003245MSI19486.544Amphiprion_percula
ENSPSIG00000011608-9386.018ENSAPEG00000006857-7986.018Amphiprion_percula
ENSPSIG00000011608-9385.127ENSATEG00000017059MSI19584.858Anabas_testudineus
ENSPSIG00000011608-9380.547ENSATEG00000023779-9380.547Anabas_testudineus
ENSPSIG00000011608-9392.353ENSACAG00000002762MSI19492.353Anolis_carolinensis
ENSPSIG00000011608-9392.105ENSANAG00000027151MSI19892.105Aotus_nancymaae
ENSPSIG00000011608-7690.406ENSANAG00000027901-9188.129Aotus_nancymaae
ENSPSIG00000011608-9385.976ENSACLG00000000117-10085.933Astatotilapia_calliptera
ENSPSIG00000011608-9385.410ENSACLG00000011230MSI19485.410Astatotilapia_calliptera
ENSPSIG00000011608-9383.699ENSAMXG00000038960msi17683.699Astyanax_mexicanus
ENSPSIG00000011608-9392.105ENSBTAG00000009800MSI110092.082Bos_taurus
ENSPSIG00000011608-9392.105ENSCJAG00000008578MSI19892.105Callithrix_jacchus
ENSPSIG00000011608-9391.813ENSCAFG00000010283MSI19891.813Canis_familiaris
ENSPSIG00000011608-9391.640ENSCAFG00020020585MSI110091.640Canis_lupus_dingo
ENSPSIG00000011608-9387.106ENSCHIG00000024304MSI19886.533Capra_hircus
ENSPSIG00000011608-9391.743ENSTSYG00000033949MSI19591.743Carlito_syrichta
ENSPSIG00000011608-9390.476ENSCAPG00000003919MSI17890.476Cavia_aperea
ENSPSIG00000011608-9392.105ENSCPOG00000012361MSI110092.105Cavia_porcellus
ENSPSIG00000011608-9392.105ENSCCAG00000035567MSI19892.105Cebus_capucinus
ENSPSIG00000011608-9392.105ENSCATG00000030019MSI19892.105Cercocebus_atys
ENSPSIG00000011608-9392.105ENSCLAG00000011329MSI110092.105Chinchilla_lanigera
ENSPSIG00000011608-7394.574ENSCSAG00000002265MSI18994.574Chlorocebus_sabaeus
ENSPSIG00000011608-9396.375ENSCPBG00000011349MSI19896.375Chrysemys_picta_bellii
ENSPSIG00000011608-9391.768ENSCANG00000040651MSI110091.768Colobus_angolensis_palliatus
ENSPSIG00000011608-9392.105ENSCGRG00001018883Msi19892.105Cricetulus_griseus_chok1gshd
ENSPSIG00000011608-9391.793ENSCGRG00000002191Msi17291.793Cricetulus_griseus_crigri
ENSPSIG00000011608-9385.671ENSCSEG00000005834-9485.671Cynoglossus_semilaevis
ENSPSIG00000011608-9379.141ENSCSEG00000011032MSI110079.141Cynoglossus_semilaevis
ENSPSIG00000011608-9385.671ENSCSEG00000008352-9485.671Cynoglossus_semilaevis
ENSPSIG00000011608-6068.519ENSCVAG00000017463-8968.519Cyprinodon_variegatus
ENSPSIG00000011608-9386.585ENSCVAG00000009100MSI19486.585Cyprinodon_variegatus
ENSPSIG00000011608-7782.791ENSDARG00000102015CABZ01037298.18982.791Danio_rerio
ENSPSIG00000011608-9380.635ENSDARG00000010710msi110084.112Danio_rerio
ENSPSIG00000011608-9388.608ENSDNOG00000005713MSI19188.608Dasypus_novemcinctus
ENSPSIG00000011608-9391.018ENSDORG00000005610Msi19491.018Dipodomys_ordii
ENSPSIG00000011608-9391.463ENSETEG00000004756MSI110091.463Echinops_telfairi
ENSPSIG00000011608-9392.105ENSEASG00005004736MSI19892.105Equus_asinus_asinus
ENSPSIG00000011608-9392.128ENSECAG00000017526MSI19892.105Equus_caballus
ENSPSIG00000011608-9876.694ENSELUG00000023219MSI19776.694Esox_lucius
ENSPSIG00000011608-9383.129ENSELUG00000023280-10083.129Esox_lucius
ENSPSIG00000011608-9392.105ENSFCAG00000011007MSI19892.105Felis_catus
ENSPSIG00000011608-9395.667ENSFALG00000007574MSI110095.667Ficedula_albicollis
ENSPSIG00000011608-9391.463ENSFDAG00000019586MSI110091.463Fukomys_damarensis
ENSPSIG00000011608-9386.322ENSFHEG00000022446MSI19486.322Fundulus_heteroclitus
ENSPSIG00000011608-9385.976ENSFHEG00000003560-9485.976Fundulus_heteroclitus
ENSPSIG00000011608-9376.506ENSGMOG00000017838-9476.506Gadus_morhua
ENSPSIG00000011608-9385.890ENSGMOG00000001006MSI19485.890Gadus_morhua
ENSPSIG00000011608-9395.038ENSGALG00000007227MSI19681.989Gallus_gallus
ENSPSIG00000011608-8967.712ENSGAFG00000005860-9067.712Gambusia_affinis
ENSPSIG00000011608-9585.075ENSGAFG00000021522MSI19685.075Gambusia_affinis
ENSPSIG00000011608-9377.778ENSGACG00000008674-9478.006Gasterosteus_aculeatus
ENSPSIG00000011608-9384.802ENSGACG00000012679MSI19484.802Gasterosteus_aculeatus
ENSPSIG00000011608-9396.375ENSGAGG00000016037MSI19496.375Gopherus_agassizii
ENSPSIG00000011608-9391.720ENSGGOG00000010328MSI110091.720Gorilla_gorilla
ENSPSIG00000011608-9385.976ENSHBUG00000011841-9485.976Haplochromis_burtoni
ENSPSIG00000011608-9385.410ENSHBUG00000021921MSI19485.410Haplochromis_burtoni
ENSPSIG00000011608-9391.813ENSHGLG00000012782MSI19891.813Heterocephalus_glaber_female
ENSPSIG00000011608-9391.463ENSHGLG00100016848MSI110091.463Heterocephalus_glaber_male
ENSPSIG00000011608-9384.444ENSHCOG00000012067-8984.444Hippocampus_comes
ENSPSIG00000011608-9381.288ENSHCOG00000012019MSI110081.288Hippocampus_comes
ENSPSIG00000011608-9383.891ENSIPUG00000001976msi19583.891Ictalurus_punctatus
ENSPSIG00000011608-9391.640ENSSTOG00000009799MSI110091.640Ictidomys_tridecemlineatus
ENSPSIG00000011608-9392.105ENSJJAG00000010463Msi19892.105Jaculus_jaculus
ENSPSIG00000011608-9382.154ENSJJAG00000010643-9482.154Jaculus_jaculus
ENSPSIG00000011608-9383.742ENSKMAG00000019877-10083.742Kryptolebias_marmoratus
ENSPSIG00000011608-9386.239ENSKMAG00000011251MSI19486.239Kryptolebias_marmoratus
ENSPSIG00000011608-9385.976ENSLBEG00000001375-9485.976Labrus_bergylta
ENSPSIG00000011608-9385.152ENSLBEG00000008789MSI19485.410Labrus_bergylta
ENSPSIG00000011608-9383.721ENSLACG00000018287MSI110083.041Latimeria_chalumnae
ENSPSIG00000011608-8981.873ENSLAFG00000009412MSI110081.269Loxodonta_africana
ENSPSIG00000011608-9392.105ENSMFAG00000001798MSI110092.105Macaca_fascicularis
ENSPSIG00000011608-9391.837ENSMMUG00000031527MSI19791.837Macaca_mulatta
ENSPSIG00000011608-9392.105ENSMNEG00000040034MSI19892.105Macaca_nemestrina
ENSPSIG00000011608-9391.768ENSMLEG00000003921MSI110091.768Mandrillus_leucophaeus
ENSPSIG00000011608-9386.239ENSMAMG00000002279MSI19486.239Mastacembelus_armatus
ENSPSIG00000011608-9386.810ENSMAMG00000018426-9486.810Mastacembelus_armatus
ENSPSIG00000011608-9385.976ENSMZEG00005000340-9485.976Maylandia_zebra
ENSPSIG00000011608-9385.410ENSMZEG00005026892MSI19485.410Maylandia_zebra
ENSPSIG00000011608-6498.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSPSIG00000011608-7198.765ENSMAUG00000016820Msi110098.765Mesocricetus_auratus
ENSPSIG00000011608-9393.598ENSMICG00000033181MSI19893.598Microcebus_murinus
ENSPSIG00000011608-9391.813ENSMOCG00000002286Msi19891.813Microtus_ochrogaster
ENSPSIG00000011608-9478.635ENSMMOG00000010492MSI19978.635Mola_mola
ENSPSIG00000011608-9381.962ENSMMOG00000012265-9781.962Mola_mola
ENSPSIG00000011608-8964.458ENSMODG00000003189-10064.458Monodelphis_domestica
ENSPSIG00000011608-9385.976ENSMALG00000017889MSI19485.976Monopterus_albus
ENSPSIG00000011608-9386.728ENSMALG00000001426-10086.728Monopterus_albus
ENSPSIG00000011608-9391.520MGP_CAROLIEiJ_G0027626Msi19891.520Mus_caroli
ENSPSIG00000011608-9395.062ENSMUSG00000054256Msi19995.062Mus_musculus
ENSPSIG00000011608-9395.455MGP_PahariEiJ_G0024206Msi19895.455Mus_pahari
ENSPSIG00000011608-9391.520MGP_SPRETEiJ_G0028624Msi19891.520Mus_spretus
ENSPSIG00000011608-9391.640ENSMPUG00000003168MSI110091.640Mustela_putorius_furo
ENSPSIG00000011608-9382.738ENSMLUG00000010313MSI110082.143Myotis_lucifugus
ENSPSIG00000011608-9391.793ENSNGAG00000014508Msi19191.793Nannospalax_galili
ENSPSIG00000011608-8777.049ENSNBRG00000018012MSI19977.049Neolamprologus_brichardi
ENSPSIG00000011608-9385.976ENSNBRG00000000841-9485.976Neolamprologus_brichardi
ENSPSIG00000011608-8881.402ENSNLEG00000015636MSI110081.402Nomascus_leucogenys
ENSPSIG00000011608-9371.037ENSMEUG00000015759MSI110071.037Notamacropus_eugenii
ENSPSIG00000011608-9084.127ENSOPRG00000016879MSI110083.492Ochotona_princeps
ENSPSIG00000011608-9391.768ENSODEG00000006328MSI110091.768Octodon_degus
ENSPSIG00000011608-9385.976ENSONIG00000011182MSI19485.976Oreochromis_niloticus
ENSPSIG00000011608-9381.871ENSONIG00000019452-9481.871Oreochromis_niloticus
ENSPSIG00000011608-9391.318ENSOCUG00000027716MSI110091.318Oryctolagus_cuniculus
ENSPSIG00000011608-9386.280ENSORLG00000029593MSI19981.846Oryzias_latipes
ENSPSIG00000011608-9386.018ENSORLG00000019978-9486.018Oryzias_latipes
ENSPSIG00000011608-9386.018ENSORLG00020001208-6786.018Oryzias_latipes_hni
ENSPSIG00000011608-9386.280ENSORLG00020008266MSI19982.979Oryzias_latipes_hni
ENSPSIG00000011608-9386.018ENSORLG00015013672-7182.371Oryzias_latipes_hsok
ENSPSIG00000011608-9386.280ENSORLG00015003916MSI19982.979Oryzias_latipes_hsok
ENSPSIG00000011608-9387.156ENSOMEG00000002272-9787.156Oryzias_melastigma
ENSPSIG00000011608-9386.018ENSOMEG00000017536MSI110082.927Oryzias_melastigma
ENSPSIG00000011608-9391.304ENSOGAG00000003847MSI19891.304Otolemur_garnettii
ENSPSIG00000011608-9390.000ENSOARG00000012097MSI110090.000Ovis_aries
ENSPSIG00000011608-9391.768ENSPPAG00000043073MSI110091.768Pan_paniscus
ENSPSIG00000011608-9392.105ENSPPRG00000000370MSI19892.105Panthera_pardus
ENSPSIG00000011608-9391.640ENSPTIG00000008913MSI110091.640Panthera_tigris_altaica
ENSPSIG00000011608-9392.105ENSPTRG00000005531MSI19892.105Pan_troglodytes
ENSPSIG00000011608-9391.813ENSPANG00000006335MSI19891.813Papio_anubis
ENSPSIG00000011608-9387.195ENSPKIG00000016497MSI19487.195Paramormyrops_kingsleyae
ENSPSIG00000011608-9386.585ENSPKIG00000023575-9486.585Paramormyrops_kingsleyae
ENSPSIG00000011608-9082.222ENSPMGG00000000514MSI19782.222Periophthalmus_magnuspinnatus
ENSPSIG00000011608-9373.684ENSPMGG00000007743-9271.519Periophthalmus_magnuspinnatus
ENSPSIG00000011608-9390.208ENSPEMG00000010491Msi19590.208Peromyscus_maniculatus_bairdii
ENSPSIG00000011608-9386.018ENSPFOG00000013113MSI19486.018Poecilia_formosa
ENSPSIG00000011608-9385.714ENSPFOG00000008319-8185.714Poecilia_formosa
ENSPSIG00000011608-9385.976ENSPLAG00000012431-9681.627Poecilia_latipinna
ENSPSIG00000011608-9386.018ENSPLAG00000014025-9486.018Poecilia_latipinna
ENSPSIG00000011608-9386.239ENSPMEG00000007025-9681.081Poecilia_mexicana
ENSPSIG00000011608-9386.018ENSPMEG00000012796MSI19486.018Poecilia_mexicana
ENSPSIG00000011608-9379.758ENSPREG00000021416-9579.758Poecilia_reticulata
ENSPSIG00000011608-5874.661ENSPREG00000014574-10073.756Poecilia_reticulata
ENSPSIG00000011608-9391.228ENSPPYG00000005027MSI19891.228Pongo_abelii
ENSPSIG00000011608-7498.913ENSPCAG00000002300MSI17293.367Procavia_capensis
ENSPSIG00000011608-9393.902ENSPCOG00000017341MSI19893.902Propithecus_coquereli
ENSPSIG00000011608-9375.000ENSPVAG00000002225MSI110075.000Pteropus_vampyrus
ENSPSIG00000011608-9385.410ENSPNYG00000004379MSI19485.410Pundamilia_nyererei
ENSPSIG00000011608-9385.976ENSPNYG00000002529-9485.976Pundamilia_nyererei
ENSPSIG00000011608-9384.195ENSPNAG00000019337msi19484.195Pygocentrus_nattereri
ENSPSIG00000011608-9391.318ENSRNOG00000001156Msi110091.318Rattus_norvegicus
ENSPSIG00000011608-9391.793ENSRBIG00000036889MSI110091.640Rhinopithecus_bieti
ENSPSIG00000011608-9391.515ENSRROG00000041076MSI19391.515Rhinopithecus_roxellana
ENSPSIG00000011608-9392.128ENSSBOG00000030259MSI19892.128Saimiri_boliviensis_boliviensis
ENSPSIG00000011608-9381.046ENSSHAG00000006834MSI110080.392Sarcophilus_harrisii
ENSPSIG00000011608-9387.500ENSSFOG00015014964-9587.273Scleropages_formosus
ENSPSIG00000011608-9486.982ENSSFOG00015005350MSI19886.982Scleropages_formosus
ENSPSIG00000011608-9385.824ENSSMAG00000009156-7185.824Scophthalmus_maximus
ENSPSIG00000011608-9381.646ENSSMAG00000018824MSI19781.646Scophthalmus_maximus
ENSPSIG00000011608-9386.280ENSSDUG00000022697-9486.280Seriola_dumerili
ENSPSIG00000011608-9385.714ENSSDUG00000001027MSI19485.714Seriola_dumerili
ENSPSIG00000011608-9385.714ENSSLDG00000016832MSI19485.714Seriola_lalandi_dorsalis
ENSPSIG00000011608-9378.550ENSSLDG00000018706-9778.550Seriola_lalandi_dorsalis
ENSPSIG00000011608-9395.770ENSSPUG00000015741MSI110095.770Sphenodon_punctatus
ENSPSIG00000011608-5875.862ENSSPAG00000014085-10075.862Stegastes_partitus
ENSPSIG00000011608-9385.671ENSSPAG00000013098-10085.671Stegastes_partitus
ENSPSIG00000011608-5090.598ENSSPAG00000015573zgc:1107966090.598Stegastes_partitus
ENSPSIG00000011608-9391.813ENSSSCG00000029365MSI110091.318Sus_scrofa
ENSPSIG00000011608-9393.235ENSTGUG00000009534MSI110093.235Taeniopygia_guttata
ENSPSIG00000011608-9380.844ENSTRUG00000015636-7980.844Takifugu_rubripes
ENSPSIG00000011608-7881.567ENSTRUG00000016249MSI110074.308Takifugu_rubripes
ENSPSIG00000011608-9360.308ENSTNIG00000019814-9460.308Tetraodon_nigroviridis
ENSPSIG00000011608-9385.494ENSTNIG00000011469MSI19485.494Tetraodon_nigroviridis
ENSPSIG00000011608-9385.145ENSTBEG00000007182MSI110085.145Tupaia_belangeri
ENSPSIG00000011608-7498.419ENSTTRG00000005663MSI17794.340Tursiops_truncatus
ENSPSIG00000011608-7487.554ENSUAMG00000015514MSI110087.554Ursus_americanus
ENSPSIG00000011608-9384.810ENSUMAG00000006176MSI19083.544Ursus_maritimus
ENSPSIG00000011608-9391.793ENSVVUG00000020993MSI110090.991Vulpes_vulpes
ENSPSIG00000011608-9393.458ENSXETG00000012216msi19493.458Xenopus_tropicalis
ENSPSIG00000011608-9571.343ENSXCOG00000017605MSI19271.343Xiphophorus_couchianus
ENSPSIG00000011608-9386.810ENSXMAG00000018237-9486.810Xiphophorus_maculatus
ENSPSIG00000011608-9386.585ENSXMAG00000027103MSI19078.370Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us