EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000011649 (Gene tree)
Gene ID: 102463249
Gene Symbol: RBM38
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 21593 bases
Position: chrJH209331.1:1680381-1701973
Accession: 102463249
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000012977	RRM_1	PF00076.22	1.8e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013039	RBM38-201	2777	XM_006125343	ENSPSIP00000012977	233 (aa)	XP_006125405	K7FY67

Gene Model

Click here to download ENSPSIG00000011649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000011649	RBM38	58	34.146	ENSPSIG00000011608	-	65	34.146
ENSPSIG00000011649	RBM38	92	67.241	ENSPSIG00000006920	RBM24	100	73.077
ENSPSIG00000011649	RBM38	58	39.474	ENSPSIG00000008618	MSI2	54	39.474
ENSPSIG00000011649	RBM38	50	42.105	ENSPSIG00000000035	-	70	36.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011649	RBM38	97	78.017	ENSG00000132819	RBM38	94	92.241	Homo_sapiens
ENSPSIG00000011649	RBM38	94	67.857	ENSAPOG00000009939	-	96	69.333	Acanthochromis_polyacanthus
ENSPSIG00000011649	RBM38	92	57.806	ENSAPOG00000003301	rbm38	93	57.806	Acanthochromis_polyacanthus
ENSPSIG00000011649	RBM38	92	57.806	ENSACIG00000000010	rbm38	93	57.806	Amphilophus_citrinellus
ENSPSIG00000011649	RBM38	94	67.982	ENSACIG00000012502	-	100	86.325	Amphilophus_citrinellus
ENSPSIG00000011649	RBM38	92	57.806	ENSAOCG00000013497	-	93	57.806	Amphiprion_ocellaris
ENSPSIG00000011649	RBM38	95	65.639	ENSAOCG00000012559	RBM38	93	67.982	Amphiprion_ocellaris
ENSPSIG00000011649	RBM38	92	60.360	ENSAPEG00000013137	rbm38	93	57.806	Amphiprion_percula
ENSPSIG00000011649	RBM38	94	62.185	ENSAPEG00000023581	-	96	64.876	Amphiprion_percula
ENSPSIG00000011649	RBM38	92	57.563	ENSATEG00000016366	rbm38	93	57.563	Anabas_testudineus
ENSPSIG00000011649	RBM38	94	64.435	ENSATEG00000016710	-	96	66.529	Anabas_testudineus
ENSPSIG00000011649	RBM38	93	85.714	ENSACAG00000016238	RBM38	99	80.169	Anolis_carolinensis
ENSPSIG00000011649	RBM38	92	80.275	ENSANAG00000031959	RBM38	100	80.275	Aotus_nancymaae
ENSPSIG00000011649	RBM38	94	65.546	ENSACLG00000019514	-	96	67.364	Astatotilapia_calliptera
ENSPSIG00000011649	RBM38	93	67.241	ENSAMXG00000015601	-	95	69.298	Astyanax_mexicanus
ENSPSIG00000011649	RBM38	90	59.091	ENSAMXG00000038120	rbm38	92	59.545	Astyanax_mexicanus
ENSPSIG00000011649	RBM38	95	78.571	ENSBTAG00000008105	RBM38	93	78.571	Bos_taurus
ENSPSIG00000011649	RBM38	56	65.385	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSPSIG00000011649	RBM38	95	80.357	ENSCJAG00000019139	RBM38	86	92.308	Callithrix_jacchus
ENSPSIG00000011649	RBM38	95	82.143	ENSCAFG00020021943	RBM38	93	82.143	Canis_lupus_dingo
ENSPSIG00000011649	RBM38	95	78.125	ENSCHIG00000002609	RBM38	93	78.125	Capra_hircus
ENSPSIG00000011649	RBM38	95	80.804	ENSCPOG00000012781	RBM38	93	80.804	Cavia_porcellus
ENSPSIG00000011649	RBM38	95	80.357	ENSCCAG00000036872	RBM38	86	92.308	Cebus_capucinus
ENSPSIG00000011649	RBM38	95	79.464	ENSCATG00000032133	RBM38	86	92.308	Cercocebus_atys
ENSPSIG00000011649	RBM38	95	79.911	ENSCLAG00000005906	RBM38	97	79.911	Chinchilla_lanigera
ENSPSIG00000011649	RBM38	95	79.464	ENSCSAG00000015503	RBM38	93	79.464	Chlorocebus_sabaeus
ENSPSIG00000011649	RBM38	92	97.209	ENSCPBG00000024059	RBM38	100	97.209	Chrysemys_picta_bellii
ENSPSIG00000011649	RBM38	64	62.420	ENSCING00000025102	-	68	62.420	Ciona_intestinalis
ENSPSIG00000011649	RBM38	66	62.500	ENSCSAVG00000001132	-	63	61.538	Ciona_savignyi
ENSPSIG00000011649	RBM38	97	59.052	ENSCANG00000030105	-	86	59.052	Colobus_angolensis_palliatus
ENSPSIG00000011649	RBM38	97	75.325	ENSCGRG00001012928	Rbm38	97	75.758	Cricetulus_griseus_chok1gshd
ENSPSIG00000011649	RBM38	65	64.516	ENSCSEG00000020943	rbm38	64	57.436	Cynoglossus_semilaevis
ENSPSIG00000011649	RBM38	98	66.953	ENSCSEG00000004701	-	100	68.803	Cynoglossus_semilaevis
ENSPSIG00000011649	RBM38	77	62.903	ENSCVAG00000015952	rbm38	92	55.983	Cyprinodon_variegatus
ENSPSIG00000011649	RBM38	91	67.826	ENSCVAG00000005472	-	93	68.240	Cyprinodon_variegatus
ENSPSIG00000011649	RBM38	91	64.126	ENSDARG00000058818	rbm38	93	64.126	Danio_rerio
ENSPSIG00000011649	RBM38	92	79.630	ENSDNOG00000032004	RBM38	100	79.630	Dasypus_novemcinctus
ENSPSIG00000011649	RBM38	95	79.911	ENSECAG00000007700	RBM38	93	79.911	Equus_caballus
ENSPSIG00000011649	RBM38	95	78.222	ENSEEUG00000013489	RBM38	93	79.556	Erinaceus_europaeus
ENSPSIG00000011649	RBM38	93	66.525	ENSELUG00000005849	-	95	66.525	Esox_lucius
ENSPSIG00000011649	RBM38	86	61.463	ENSELUG00000000585	-	89	61.463	Esox_lucius
ENSPSIG00000011649	RBM38	95	80.357	ENSFCAG00000042916	RBM38	86	91.346	Felis_catus
ENSPSIG00000011649	RBM38	74	92.442	ENSFALG00000010805	RBM38	95	87.701	Ficedula_albicollis
ENSPSIG00000011649	RBM38	91	55.508	ENSFHEG00000017748	rbm38	92	55.508	Fundulus_heteroclitus
ENSPSIG00000011649	RBM38	91	71.296	ENSFHEG00000006160	-	92	71.296	Fundulus_heteroclitus
ENSPSIG00000011649	RBM38	78	70.109	ENSGMOG00000016655	-	98	74.054	Gadus_morhua
ENSPSIG00000011649	RBM38	92	93.023	ENSGALG00000026081	RBM38	100	93.023	Gallus_gallus
ENSPSIG00000011649	RBM38	92	60.829	ENSGACG00000015224	rbm38	100	60.829	Gasterosteus_aculeatus
ENSPSIG00000011649	RBM38	91	68.056	ENSGACG00000009873	-	98	69.585	Gasterosteus_aculeatus
ENSPSIG00000011649	RBM38	92	97.209	ENSGAGG00000001187	RBM38	100	97.209	Gopherus_agassizii
ENSPSIG00000011649	RBM38	100	57.143	ENSHBUG00000012058	rbm38	99	57.143	Haplochromis_burtoni
ENSPSIG00000011649	RBM38	94	69.027	ENSHBUG00000011778	-	96	70.925	Haplochromis_burtoni
ENSPSIG00000011649	RBM38	95	76.233	ENSHGLG00000015077	RBM38	93	79.372	Heterocephalus_glaber_female
ENSPSIG00000011649	RBM38	55	72.093	ENSHCOG00000019040	rbm38	55	72.093	Hippocampus_comes
ENSPSIG00000011649	RBM38	86	71.220	ENSHCOG00000005622	-	57	72.195	Hippocampus_comes
ENSPSIG00000011649	RBM38	93	68.534	ENSIPUG00000019349	-	95	68.534	Ictalurus_punctatus
ENSPSIG00000011649	RBM38	90	52.137	ENSKMAG00000012402	rbm38	99	51.915	Kryptolebias_marmoratus
ENSPSIG00000011649	RBM38	94	66.667	ENSLBEG00000016163	RBM38	96	68.996	Labrus_bergylta
ENSPSIG00000011649	RBM38	92	55.932	ENSLBEG00000018878	rbm38	93	55.932	Labrus_bergylta
ENSPSIG00000011649	RBM38	93	72.889	ENSLOCG00000003456	rbm38	95	72.889	Lepisosteus_oculatus
ENSPSIG00000011649	RBM38	95	79.464	ENSMFAG00000043808	RBM38	86	92.308	Macaca_fascicularis
ENSPSIG00000011649	RBM38	95	79.464	ENSMMUG00000031391	RBM38	86	92.308	Macaca_mulatta
ENSPSIG00000011649	RBM38	95	79.464	ENSMNEG00000034683	RBM38	86	92.308	Macaca_nemestrina
ENSPSIG00000011649	RBM38	92	55.462	ENSMAMG00000024135	rbm38	93	55.462	Mastacembelus_armatus
ENSPSIG00000011649	RBM38	94	63.291	ENSMAMG00000020499	RBM38	96	65.975	Mastacembelus_armatus
ENSPSIG00000011649	RBM38	94	69.027	ENSMZEG00005000849	-	96	70.925	Maylandia_zebra
ENSPSIG00000011649	RBM38	92	59.244	ENSMZEG00005026036	rbm38	93	59.244	Maylandia_zebra
ENSPSIG00000011649	RBM38	97	75.758	ENSMAUG00000021211	Rbm38	97	76.190	Mesocricetus_auratus
ENSPSIG00000011649	RBM38	92	82.110	ENSMICG00000038011	RBM38	100	82.110	Microcebus_murinus
ENSPSIG00000011649	RBM38	97	76.190	ENSMOCG00000008715	Rbm38	97	76.623	Microtus_ochrogaster
ENSPSIG00000011649	RBM38	93	68.610	ENSMMOG00000020051	-	94	70.536	Mola_mola
ENSPSIG00000011649	RBM38	92	91.163	ENSMODG00000016458	RBM38	92	91.163	Monodelphis_domestica
ENSPSIG00000011649	RBM38	65	67.742	ENSMALG00000022327	rbm38	67	67.742	Monopterus_albus
ENSPSIG00000011649	RBM38	79	76.316	ENSMALG00000004680	RBM38	71	76.316	Monopterus_albus
ENSPSIG00000011649	RBM38	97	74.892	MGP_CAROLIEiJ_G0024745	Rbm38	97	77.922	Mus_caroli
ENSPSIG00000011649	RBM38	97	74.892	ENSMUSG00000027510	Rbm38	97	77.922	Mus_musculus
ENSPSIG00000011649	RBM38	97	75.325	MGP_PahariEiJ_G0026186	Rbm38	97	78.355	Mus_pahari
ENSPSIG00000011649	RBM38	97	74.459	MGP_SPRETEiJ_G0025665	Rbm38	97	77.489	Mus_spretus
ENSPSIG00000011649	RBM38	78	85.870	ENSMPUG00000006518	RBM38	91	85.870	Mustela_putorius_furo
ENSPSIG00000011649	RBM38	92	77.982	ENSMLUG00000011140	RBM38	100	77.982	Myotis_lucifugus
ENSPSIG00000011649	RBM38	94	65.546	ENSNBRG00000022545	-	96	67.364	Neolamprologus_brichardi
ENSPSIG00000011649	RBM38	100	57.959	ENSNBRG00000022685	rbm38	99	57.959	Neolamprologus_brichardi
ENSPSIG00000011649	RBM38	51	88.136	ENSMEUG00000005475	-	88	88.136	Notamacropus_eugenii
ENSPSIG00000011649	RBM38	95	79.911	ENSODEG00000007980	RBM38	93	79.911	Octodon_degus
ENSPSIG00000011649	RBM38	92	59.494	ENSONIG00000017073	rbm38	95	59.494	Oreochromis_niloticus
ENSPSIG00000011649	RBM38	94	65.401	ENSONIG00000020324	-	96	67.227	Oreochromis_niloticus
ENSPSIG00000011649	RBM38	92	91.163	ENSOANG00000009259	RBM38	83	91.163	Ornithorhynchus_anatinus
ENSPSIG00000011649	RBM38	92	55.230	ENSORLG00000012154	rbm38	93	55.230	Oryzias_latipes
ENSPSIG00000011649	RBM38	93	61.667	ENSORLG00000027180	-	95	66.245	Oryzias_latipes
ENSPSIG00000011649	RBM38	92	55.833	ENSORLG00020017871	rbm38	93	55.833	Oryzias_latipes_hni
ENSPSIG00000011649	RBM38	93	61.667	ENSORLG00020020751	-	95	66.245	Oryzias_latipes_hni
ENSPSIG00000011649	RBM38	96	55.895	ENSORLG00015012606	rbm38	95	55.895	Oryzias_latipes_hsok
ENSPSIG00000011649	RBM38	92	62.185	ENSORLG00015017040	-	95	67.089	Oryzias_latipes_hsok
ENSPSIG00000011649	RBM38	92	63.291	ENSOMEG00000023912	-	95	67.227	Oryzias_melastigma
ENSPSIG00000011649	RBM38	92	55.649	ENSOMEG00000006805	rbm38	93	55.649	Oryzias_melastigma
ENSPSIG00000011649	RBM38	93	80.365	ENSOGAG00000029136	RBM38	90	80.365	Otolemur_garnettii
ENSPSIG00000011649	RBM38	95	80.357	ENSPPRG00000009507	RBM38	86	91.346	Panthera_pardus
ENSPSIG00000011649	RBM38	88	81.159	ENSPTRG00000013661	RBM38	93	87.500	Pan_troglodytes
ENSPSIG00000011649	RBM38	53	92.742	ENSPTRG00000045845	-	68	92.742	Pan_troglodytes
ENSPSIG00000011649	RBM38	97	65.066	ENSPANG00000033127	-	95	65.066	Papio_anubis
ENSPSIG00000011649	RBM38	95	79.464	ENSPANG00000020919	-	86	92.308	Papio_anubis
ENSPSIG00000011649	RBM38	94	64.255	ENSPKIG00000025417	rbm38	96	64.681	Paramormyrops_kingsleyae
ENSPSIG00000011649	RBM38	91	68.807	ENSPKIG00000018122	-	95	87.387	Paramormyrops_kingsleyae
ENSPSIG00000011649	RBM38	91	63.362	ENSPMGG00000017094	-	93	66.524	Periophthalmus_magnuspinnatus
ENSPSIG00000011649	RBM38	92	55.508	ENSPMGG00000011343	rbm38	75	64.021	Periophthalmus_magnuspinnatus
ENSPSIG00000011649	RBM38	92	90.233	ENSPCIG00000013648	RBM38	92	90.233	Phascolarctos_cinereus
ENSPSIG00000011649	RBM38	77	61.497	ENSPFOG00000011658	rbm38	92	55.696	Poecilia_formosa
ENSPSIG00000011649	RBM38	91	67.234	ENSPLAG00000002500	-	93	68.936	Poecilia_latipinna
ENSPSIG00000011649	RBM38	77	61.497	ENSPLAG00000005218	rbm38	92	55.696	Poecilia_latipinna
ENSPSIG00000011649	RBM38	77	61.497	ENSPMEG00000015770	rbm38	92	58.298	Poecilia_mexicana
ENSPSIG00000011649	RBM38	77	62.032	ENSPREG00000007398	rbm38	92	56.118	Poecilia_reticulata
ENSPSIG00000011649	RBM38	93	82.192	ENSPCOG00000026201	RBM38	81	94.949	Propithecus_coquereli
ENSPSIG00000011649	RBM38	95	53.125	ENSPVAG00000006457	RBM38	93	54.018	Pteropus_vampyrus
ENSPSIG00000011649	RBM38	94	69.027	ENSPNYG00000019727	-	100	85.470	Pundamilia_nyererei
ENSPSIG00000011649	RBM38	100	56.067	ENSPNYG00000021373	rbm38	99	56.067	Pundamilia_nyererei
ENSPSIG00000011649	RBM38	90	65.297	ENSPNAG00000010596	rbm38	91	65.297	Pygocentrus_nattereri
ENSPSIG00000011649	RBM38	93	66.812	ENSPNAG00000015123	-	97	73.684	Pygocentrus_nattereri
ENSPSIG00000011649	RBM38	97	77.056	ENSRNOG00000006420	Rbm38	97	77.056	Rattus_norvegicus
ENSPSIG00000011649	RBM38	97	63.362	ENSRROG00000036388	-	96	63.362	Rhinopithecus_roxellana
ENSPSIG00000011649	RBM38	92	80.734	ENSSBOG00000031053	RBM38	97	92.308	Saimiri_boliviensis_boliviensis
ENSPSIG00000011649	RBM38	91	64.840	ENSSFOG00015004453	rbm38	92	69.369	Scleropages_formosus
ENSPSIG00000011649	RBM38	92	59.494	ENSSDUG00000022611	rbm38	93	59.494	Seriola_dumerili
ENSPSIG00000011649	RBM38	94	66.109	ENSSDUG00000021082	RBM38	96	66.116	Seriola_dumerili
ENSPSIG00000011649	RBM38	92	61.261	ENSSLDG00000010845	rbm38	92	61.261	Seriola_lalandi_dorsalis
ENSPSIG00000011649	RBM38	94	66.109	ENSSLDG00000011778	RBM38	96	66.116	Seriola_lalandi_dorsalis
ENSPSIG00000011649	RBM38	92	57.563	ENSSPAG00000011113	rbm38	93	57.563	Stegastes_partitus
ENSPSIG00000011649	RBM38	94	66.368	ENSSPAG00000020989	RBM38	96	69.196	Stegastes_partitus
ENSPSIG00000011649	RBM38	95	80.804	ENSSSCG00000007504	RBM38	93	80.804	Sus_scrofa
ENSPSIG00000011649	RBM38	78	65.608	ENSTRUG00000024954	rbm38	80	63.054	Takifugu_rubripes
ENSPSIG00000011649	RBM38	94	63.223	ENSTRUG00000019869	-	96	65.021	Takifugu_rubripes
ENSPSIG00000011649	RBM38	92	67.111	ENSTNIG00000007093	-	100	69.027	Tetraodon_nigroviridis
ENSPSIG00000011649	RBM38	95	79.464	ENSUAMG00000019780	RBM38	93	79.911	Ursus_americanus
ENSPSIG00000011649	RBM38	95	82.143	ENSVVUG00000017246	RBM38	93	82.143	Vulpes_vulpes
ENSPSIG00000011649	RBM38	92	80.365	ENSXETG00000011268	rbm38	99	81.279	Xenopus_tropicalis
ENSPSIG00000011649	RBM38	77	62.903	ENSXMAG00000023662	rbm38	92	55.508	Xiphophorus_maculatus