EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000011690 (Gene tree)
Gene ID: 102463710
Gene Symbol: RTCB
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 19484 bases
Position: chrJH224648.1:2264062-2283545
Accession: 102463710
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000012985	RtcB	PF01139.17	3.6e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013048	RTCB-201	3489	XM_006138063	ENSPSIP00000012985	460 (aa)	-	K7FY75

Gene Model

Click here to download ENSPSIG00000011690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011690	RTCB	100	98.043	ENSG00000100220	RTCB	91	98.043	Homo_sapiens
ENSPSIG00000011690	RTCB	100	94.130	ENSAPOG00000006040	rtcb	91	94.130	Acanthochromis_polyacanthus
ENSPSIG00000011690	RTCB	100	97.826	ENSAMEG00000016152	RTCB	91	97.826	Ailuropoda_melanoleuca
ENSPSIG00000011690	RTCB	100	89.783	ENSACIG00000009083	rtcb	91	89.783	Amphilophus_citrinellus
ENSPSIG00000011690	RTCB	100	94.348	ENSAOCG00000005662	rtcb	100	94.348	Amphiprion_ocellaris
ENSPSIG00000011690	RTCB	100	90.435	ENSAPEG00000024653	rtcb	94	90.435	Amphiprion_percula
ENSPSIG00000011690	RTCB	100	94.348	ENSAPEG00000024701	rtcb	91	94.348	Amphiprion_percula
ENSPSIG00000011690	RTCB	100	94.783	ENSATEG00000000618	rtcb	91	94.783	Anabas_testudineus
ENSPSIG00000011690	RTCB	100	97.174	ENSACAG00000014817	RTCB	89	97.174	Anolis_carolinensis
ENSPSIG00000011690	RTCB	70	94.444	ENSANAG00000023724	-	89	59.002	Aotus_nancymaae
ENSPSIG00000011690	RTCB	100	82.174	ENSANAG00000018191	-	83	82.174	Aotus_nancymaae
ENSPSIG00000011690	RTCB	100	93.478	ENSACLG00000008367	rtcb	100	93.478	Astatotilapia_calliptera
ENSPSIG00000011690	RTCB	100	94.130	ENSAMXG00000042320	rtcb	91	94.130	Astyanax_mexicanus
ENSPSIG00000011690	RTCB	100	98.043	ENSBTAG00000011070	RTCB	91	98.043	Bos_taurus
ENSPSIG00000011690	RTCB	100	74.783	WBGene00008877	rtcb-1	91	74.783	Caenorhabditis_elegans
ENSPSIG00000011690	RTCB	100	98.043	ENSCJAG00000006128	RTCB	91	98.043	Callithrix_jacchus
ENSPSIG00000011690	RTCB	100	97.826	ENSCAFG00000001785	RTCB	91	97.826	Canis_familiaris
ENSPSIG00000011690	RTCB	100	93.261	ENSCAFG00000010789	-	91	93.261	Canis_familiaris
ENSPSIG00000011690	RTCB	86	93.924	ENSCAFG00020018953	-	90	93.924	Canis_lupus_dingo
ENSPSIG00000011690	RTCB	100	97.826	ENSCAFG00020004890	-	91	97.826	Canis_lupus_dingo
ENSPSIG00000011690	RTCB	50	72.926	ENSCHIG00000017428	-	100	72.926	Capra_hircus
ENSPSIG00000011690	RTCB	100	98.043	ENSCHIG00000027009	-	91	98.043	Capra_hircus
ENSPSIG00000011690	RTCB	100	97.826	ENSTSYG00000012320	RTCB	91	97.826	Carlito_syrichta
ENSPSIG00000011690	RTCB	100	98.261	ENSCAPG00000011647	RTCB	93	98.261	Cavia_aperea
ENSPSIG00000011690	RTCB	100	98.043	ENSCCAG00000000618	RTCB	91	98.043	Cebus_capucinus
ENSPSIG00000011690	RTCB	100	97.826	ENSCATG00000033424	RTCB	91	97.826	Cercocebus_atys
ENSPSIG00000011690	RTCB	100	97.826	ENSCLAG00000007997	RTCB	91	97.826	Chinchilla_lanigera
ENSPSIG00000011690	RTCB	100	97.826	ENSCSAG00000008351	RTCB	91	97.826	Chlorocebus_sabaeus
ENSPSIG00000011690	RTCB	100	82.391	ENSCHOG00000009123	RTCB	91	82.391	Choloepus_hoffmanni
ENSPSIG00000011690	RTCB	100	99.565	ENSCPBG00000023184	RTCB	91	99.565	Chrysemys_picta_bellii
ENSPSIG00000011690	RTCB	100	83.913	ENSCING00000003830	-	91	83.913	Ciona_intestinalis
ENSPSIG00000011690	RTCB	100	83.913	ENSCSAVG00000008124	-	100	80.410	Ciona_savignyi
ENSPSIG00000011690	RTCB	100	93.913	ENSCANG00000001891	RTCB	91	93.913	Colobus_angolensis_palliatus
ENSPSIG00000011690	RTCB	100	97.826	ENSCGRG00001011173	Rtcb	91	97.826	Cricetulus_griseus_chok1gshd
ENSPSIG00000011690	RTCB	100	98.043	ENSCGRG00000009587	-	94	98.043	Cricetulus_griseus_crigri
ENSPSIG00000011690	RTCB	100	94.130	ENSCSEG00000003986	rtcb	91	94.130	Cynoglossus_semilaevis
ENSPSIG00000011690	RTCB	90	92.548	ENSCVAG00000000569	rtcb	95	92.548	Cyprinodon_variegatus
ENSPSIG00000011690	RTCB	100	93.913	ENSDARG00000101047	rtcb	91	93.913	Danio_rerio
ENSPSIG00000011690	RTCB	78	95.028	ENSDNOG00000012425	RTCB	89	95.028	Dasypus_novemcinctus
ENSPSIG00000011690	RTCB	100	98.043	ENSDORG00000010855	Rtcb	91	98.043	Dipodomys_ordii
ENSPSIG00000011690	RTCB	100	86.304	FBgn0032781	RtcB	91	86.304	Drosophila_melanogaster
ENSPSIG00000011690	RTCB	100	90.870	ENSETEG00000001988	RTCB	91	90.870	Echinops_telfairi
ENSPSIG00000011690	RTCB	100	85.652	ENSEBUG00000014235	rtcb	91	85.652	Eptatretus_burgeri
ENSPSIG00000011690	RTCB	100	98.043	ENSEASG00005019059	RTCB	91	98.043	Equus_asinus_asinus
ENSPSIG00000011690	RTCB	100	98.043	ENSECAG00000023998	RTCB	91	98.043	Equus_caballus
ENSPSIG00000011690	RTCB	97	88.789	ENSEEUG00000006251	RTCB	99	88.789	Erinaceus_europaeus
ENSPSIG00000011690	RTCB	100	81.818	ENSELUG00000009275	rtcb	91	81.818	Esox_lucius
ENSPSIG00000011690	RTCB	100	98.043	ENSFCAG00000026480	RTCB	91	98.043	Felis_catus
ENSPSIG00000011690	RTCB	100	98.478	ENSFALG00000013334	RTCB	91	98.478	Ficedula_albicollis
ENSPSIG00000011690	RTCB	100	98.043	ENSFDAG00000018150	RTCB	91	98.043	Fukomys_damarensis
ENSPSIG00000011690	RTCB	100	94.783	ENSFHEG00000009595	rtcb	91	94.783	Fundulus_heteroclitus
ENSPSIG00000011690	RTCB	100	92.609	ENSGMOG00000018882	rtcb	91	92.609	Gadus_morhua
ENSPSIG00000011690	RTCB	100	98.913	ENSGALG00000012611	RTCB	91	98.913	Gallus_gallus
ENSPSIG00000011690	RTCB	100	94.565	ENSGAFG00000004198	rtcb	91	94.565	Gambusia_affinis
ENSPSIG00000011690	RTCB	100	93.913	ENSGACG00000000586	rtcb	91	93.913	Gasterosteus_aculeatus
ENSPSIG00000011690	RTCB	92	99.294	ENSGAGG00000019133	RTCB	88	99.294	Gopherus_agassizii
ENSPSIG00000011690	RTCB	100	98.043	ENSGGOG00000011402	RTCB	91	98.043	Gorilla_gorilla
ENSPSIG00000011690	RTCB	100	93.478	ENSHBUG00000020571	rtcb	91	93.478	Haplochromis_burtoni
ENSPSIG00000011690	RTCB	99	69.281	ENSHGLG00000001066	-	97	69.281	Heterocephalus_glaber_female
ENSPSIG00000011690	RTCB	100	98.043	ENSHGLG00000004492	RTCB	91	98.043	Heterocephalus_glaber_female
ENSPSIG00000011690	RTCB	100	98.043	ENSHGLG00100008965	RTCB	91	98.043	Heterocephalus_glaber_male
ENSPSIG00000011690	RTCB	100	91.991	ENSHCOG00000006450	rtcb	91	91.991	Hippocampus_comes
ENSPSIG00000011690	RTCB	100	95.000	ENSIPUG00000015443	rtcb	91	95.000	Ictalurus_punctatus
ENSPSIG00000011690	RTCB	100	97.826	ENSSTOG00000003878	RTCB	91	97.826	Ictidomys_tridecemlineatus
ENSPSIG00000011690	RTCB	100	97.609	ENSJJAG00000010667	Rtcb	91	97.609	Jaculus_jaculus
ENSPSIG00000011690	RTCB	100	94.565	ENSKMAG00000013178	rtcb	91	94.565	Kryptolebias_marmoratus
ENSPSIG00000011690	RTCB	100	94.565	ENSLBEG00000010566	RTCB	91	94.565	Labrus_bergylta
ENSPSIG00000011690	RTCB	100	93.478	ENSLBEG00000000214	rtcb	91	93.478	Labrus_bergylta
ENSPSIG00000011690	RTCB	100	96.522	ENSLACG00000013033	RTCB	91	96.522	Latimeria_chalumnae
ENSPSIG00000011690	RTCB	100	94.783	ENSLOCG00000016515	rtcb	91	94.783	Lepisosteus_oculatus
ENSPSIG00000011690	RTCB	100	97.174	ENSLAFG00000002082	RTCB	91	97.174	Loxodonta_africana
ENSPSIG00000011690	RTCB	100	97.826	ENSMFAG00000034419	RTCB	91	97.826	Macaca_fascicularis
ENSPSIG00000011690	RTCB	100	97.826	ENSMMUG00000006720	RTCB	91	97.826	Macaca_mulatta
ENSPSIG00000011690	RTCB	100	97.826	ENSMNEG00000040669	RTCB	91	97.826	Macaca_nemestrina
ENSPSIG00000011690	RTCB	100	97.826	ENSMLEG00000040505	RTCB	91	97.826	Mandrillus_leucophaeus
ENSPSIG00000011690	RTCB	100	94.565	ENSMAMG00000020676	rtcb	91	94.565	Mastacembelus_armatus
ENSPSIG00000011690	RTCB	100	93.478	ENSMZEG00005018942	rtcb	91	93.478	Maylandia_zebra
ENSPSIG00000011690	RTCB	100	98.485	ENSMGAG00000012805	RTCB	91	98.485	Meleagris_gallopavo
ENSPSIG00000011690	RTCB	62	99.115	ENSMAUG00000008301	Rtcb	95	99.115	Mesocricetus_auratus
ENSPSIG00000011690	RTCB	100	98.043	ENSMICG00000013303	-	91	98.043	Microcebus_murinus
ENSPSIG00000011690	RTCB	100	78.913	ENSMICG00000036677	-	90	78.913	Microcebus_murinus
ENSPSIG00000011690	RTCB	100	97.826	ENSMOCG00000002440	Rtcb	91	97.826	Microtus_ochrogaster
ENSPSIG00000011690	RTCB	100	94.565	ENSMMOG00000005987	rtcb	91	94.565	Mola_mola
ENSPSIG00000011690	RTCB	100	98.478	ENSMODG00000001414	RTCB	91	98.478	Monodelphis_domestica
ENSPSIG00000011690	RTCB	100	94.783	ENSMALG00000007603	rtcb	91	94.783	Monopterus_albus
ENSPSIG00000011690	RTCB	100	98.043	MGP_CAROLIEiJ_G0015689	Rtcb	91	98.043	Mus_caroli
ENSPSIG00000011690	RTCB	100	98.043	ENSMUSG00000001783	Rtcb	91	98.043	Mus_musculus
ENSPSIG00000011690	RTCB	100	98.043	MGP_PahariEiJ_G0031396	Rtcb	91	98.043	Mus_pahari
ENSPSIG00000011690	RTCB	100	98.043	MGP_SPRETEiJ_G0016507	Rtcb	91	98.043	Mus_spretus
ENSPSIG00000011690	RTCB	100	97.826	ENSMPUG00000012285	RTCB	91	97.826	Mustela_putorius_furo
ENSPSIG00000011690	RTCB	100	95.652	ENSMLUG00000007803	RTCB	91	95.652	Myotis_lucifugus
ENSPSIG00000011690	RTCB	72	98.667	ENSNGAG00000005093	Rtcb	87	98.667	Nannospalax_galili
ENSPSIG00000011690	RTCB	100	93.696	ENSNBRG00000017202	rtcb	91	93.696	Neolamprologus_brichardi
ENSPSIG00000011690	RTCB	100	98.043	ENSNLEG00000004960	RTCB	91	98.043	Nomascus_leucogenys
ENSPSIG00000011690	RTCB	100	70.000	ENSMEUG00000007809	-	91	70.000	Notamacropus_eugenii
ENSPSIG00000011690	RTCB	70	100.000	ENSOPRG00000003488	RTCB	69	100.000	Ochotona_princeps
ENSPSIG00000011690	RTCB	87	99.057	ENSODEG00000013033	-	96	99.057	Octodon_degus
ENSPSIG00000011690	RTCB	100	64.130	ENSODEG00000005042	-	89	64.130	Octodon_degus
ENSPSIG00000011690	RTCB	100	94.565	ENSONIG00000007474	rtcb	91	94.565	Oreochromis_niloticus
ENSPSIG00000011690	RTCB	100	98.261	ENSOANG00000005524	RTCB	91	98.261	Ornithorhynchus_anatinus
ENSPSIG00000011690	RTCB	92	97.882	ENSOCUG00000008270	RTCB	87	97.882	Oryctolagus_cuniculus
ENSPSIG00000011690	RTCB	100	94.348	ENSORLG00000020093	rtcb	91	94.348	Oryzias_latipes
ENSPSIG00000011690	RTCB	100	94.348	ENSORLG00020003706	rtcb	96	94.348	Oryzias_latipes_hni
ENSPSIG00000011690	RTCB	100	94.565	ENSORLG00015002968	rtcb	91	94.565	Oryzias_latipes_hsok
ENSPSIG00000011690	RTCB	100	93.913	ENSOMEG00000021278	rtcb	91	93.913	Oryzias_melastigma
ENSPSIG00000011690	RTCB	100	97.391	ENSOGAG00000001425	RTCB	91	97.391	Otolemur_garnettii
ENSPSIG00000011690	RTCB	100	98.043	ENSOARG00000018008	RTCB	91	98.043	Ovis_aries
ENSPSIG00000011690	RTCB	100	98.043	ENSPPAG00000028667	RTCB	91	98.043	Pan_paniscus
ENSPSIG00000011690	RTCB	100	98.043	ENSPPRG00000004038	RTCB	91	98.043	Panthera_pardus
ENSPSIG00000011690	RTCB	100	94.348	ENSPTIG00000020499	RTCB	94	94.348	Panthera_tigris_altaica
ENSPSIG00000011690	RTCB	100	98.043	ENSPTRG00000014287	RTCB	91	98.043	Pan_troglodytes
ENSPSIG00000011690	RTCB	100	97.826	ENSPANG00000016035	RTCB	91	97.826	Papio_anubis
ENSPSIG00000011690	RTCB	100	93.478	ENSPKIG00000001881	rtcb	91	93.478	Paramormyrops_kingsleyae
ENSPSIG00000011690	RTCB	100	94.348	ENSPMGG00000016672	rtcb	91	94.348	Periophthalmus_magnuspinnatus
ENSPSIG00000011690	RTCB	100	98.043	ENSPEMG00000019548	Rtcb	91	98.043	Peromyscus_maniculatus_bairdii
ENSPSIG00000011690	RTCB	100	92.391	ENSPMAG00000005657	rtcb	91	92.391	Petromyzon_marinus
ENSPSIG00000011690	RTCB	100	98.043	ENSPCIG00000009467	RTCB	91	98.043	Phascolarctos_cinereus
ENSPSIG00000011690	RTCB	100	95.000	ENSPFOG00000003058	rtcb	91	95.000	Poecilia_formosa
ENSPSIG00000011690	RTCB	100	95.000	ENSPLAG00000017663	rtcb	91	95.000	Poecilia_latipinna
ENSPSIG00000011690	RTCB	100	95.000	ENSPMEG00000006227	rtcb	91	95.000	Poecilia_mexicana
ENSPSIG00000011690	RTCB	100	95.000	ENSPREG00000018467	rtcb	91	95.000	Poecilia_reticulata
ENSPSIG00000011690	RTCB	100	98.043	ENSPPYG00000011752	RTCB	91	98.043	Pongo_abelii
ENSPSIG00000011690	RTCB	92	78.689	ENSPCAG00000013641	RTCB	90	78.689	Procavia_capensis
ENSPSIG00000011690	RTCB	100	98.043	ENSPCOG00000017243	RTCB	91	98.043	Propithecus_coquereli
ENSPSIG00000011690	RTCB	92	97.176	ENSPVAG00000002380	RTCB	90	97.176	Pteropus_vampyrus
ENSPSIG00000011690	RTCB	100	93.478	ENSPNYG00000022760	rtcb	91	93.478	Pundamilia_nyererei
ENSPSIG00000011690	RTCB	100	95.000	ENSPNAG00000009209	rtcb	91	95.000	Pygocentrus_nattereri
ENSPSIG00000011690	RTCB	100	98.043	ENSRNOG00000004813	Rtcb	91	98.043	Rattus_norvegicus
ENSPSIG00000011690	RTCB	100	88.286	ENSRBIG00000042090	RTCB	91	88.286	Rhinopithecus_bieti
ENSPSIG00000011690	RTCB	99	94.105	ENSSBOG00000020085	-	92	94.105	Saimiri_boliviensis_boliviensis
ENSPSIG00000011690	RTCB	100	97.826	ENSSHAG00000016277	RTCB	97	97.826	Sarcophilus_harrisii
ENSPSIG00000011690	RTCB	100	93.478	ENSSFOG00015000763	rtcb	91	93.478	Scleropages_formosus
ENSPSIG00000011690	RTCB	100	93.696	ENSSFOG00015011572	RTCB	91	93.696	Scleropages_formosus
ENSPSIG00000011690	RTCB	100	90.870	ENSSMAG00000005096	rtcb	91	90.870	Scophthalmus_maximus
ENSPSIG00000011690	RTCB	100	94.130	ENSSDUG00000012605	rtcb	91	94.130	Seriola_dumerili
ENSPSIG00000011690	RTCB	100	94.130	ENSSLDG00000019458	rtcb	91	94.130	Seriola_lalandi_dorsalis
ENSPSIG00000011690	RTCB	70	97.143	ENSSARG00000004799	-	68	97.143	Sorex_araneus
ENSPSIG00000011690	RTCB	100	97.826	ENSSPUG00000012814	RTCB	91	97.826	Sphenodon_punctatus
ENSPSIG00000011690	RTCB	100	94.348	ENSSPAG00000004623	rtcb	91	94.348	Stegastes_partitus
ENSPSIG00000011690	RTCB	100	98.043	ENSSSCG00000000158	RTCB	91	98.043	Sus_scrofa
ENSPSIG00000011690	RTCB	100	98.478	ENSTGUG00000010947	RTCB	91	98.478	Taeniopygia_guttata
ENSPSIG00000011690	RTCB	100	94.348	ENSTRUG00000009880	rtcb	100	94.348	Takifugu_rubripes
ENSPSIG00000011690	RTCB	100	93.261	ENSTNIG00000002484	rtcb	91	93.261	Tetraodon_nigroviridis
ENSPSIG00000011690	RTCB	97	88.789	ENSTBEG00000004418	RTCB	88	88.789	Tupaia_belangeri
ENSPSIG00000011690	RTCB	92	97.882	ENSTTRG00000006417	RTCB	90	97.882	Tursiops_truncatus
ENSPSIG00000011690	RTCB	100	97.826	ENSUAMG00000022792	RTCB	91	97.826	Ursus_americanus
ENSPSIG00000011690	RTCB	100	97.826	ENSUMAG00000017225	RTCB	91	97.826	Ursus_maritimus
ENSPSIG00000011690	RTCB	100	97.826	ENSVPAG00000005375	RTCB	91	97.826	Vicugna_pacos
ENSPSIG00000011690	RTCB	100	97.826	ENSVVUG00000023408	RTCB	100	98.034	Vulpes_vulpes
ENSPSIG00000011690	RTCB	100	95.652	ENSXETG00000011523	rtcb	91	95.652	Xenopus_tropicalis
ENSPSIG00000011690	RTCB	50	92.140	ENSXCOG00000011944	rtcb	100	92.140	Xiphophorus_couchianus
ENSPSIG00000011690	RTCB	100	94.783	ENSXMAG00000002855	rtcb	91	94.783	Xiphophorus_maculatus