EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000011722 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: -
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 13295 bases
Position: chrJH224662.1:5347900-5361194
Accession: 102455217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013017	zf-C2H2	PF00096.26	3e-15	1	3
ENSPSIP00000013017	zf-C2H2	PF00096.26	3e-15	2	3
ENSPSIP00000013017	zf-C2H2	PF00096.26	3e-15	3	3
ENSPSIP00000013017	zf-met	PF12874.7	6.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013080	GTF3A-201	883	XM_006138912	ENSPSIP00000013017	217 (aa)	-	K7FYA7

Gene Model

Click here to download ENSPSIG00000011722's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011722's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000011722	GTF3A	71	36.449	ENSPSIG00000008588	-	97	36.449
ENSPSIG00000011722	GTF3A	61	30.216	ENSPSIG00000004262	SNAI3	51	30.216
ENSPSIG00000011722	GTF3A	65	33.333	ENSPSIG00000000672	-	75	33.333
ENSPSIG00000011722	GTF3A	65	34.483	ENSPSIG00000003152	-	66	34.483
ENSPSIG00000011722	GTF3A	69	33.566	ENSPSIG00000012650	-	56	33.566
ENSPSIG00000011722	GTF3A	71	32.609	ENSPSIG00000001026	-	84	32.609
ENSPSIG00000011722	GTF3A	81	32.653	ENSPSIG00000005128	-	90	33.803
ENSPSIG00000011722	GTF3A	65	39.091	ENSPSIG00000006790	-	74	39.091
ENSPSIG00000011722	GTF3A	64	34.722	ENSPSIG00000015465	-	69	34.722
ENSPSIG00000011722	GTF3A	72	34.266	ENSPSIG00000015459	-	54	34.266
ENSPSIG00000011722	GTF3A	73	31.737	ENSPSIG00000009270	-	57	32.117
ENSPSIG00000011722	GTF3A	85	31.429	ENSPSIG00000004647	-	60	31.429
ENSPSIG00000011722	GTF3A	71	35.211	ENSPSIG00000010248	-	60	35.211
ENSPSIG00000011722	GTF3A	64	34.375	ENSPSIG00000000075	-	68	34.375
ENSPSIG00000011722	GTF3A	65	34.532	ENSPSIG00000012865	-	66	34.228
ENSPSIG00000011722	GTF3A	71	34.247	ENSPSIG00000010405	-	98	34.247
ENSPSIG00000011722	GTF3A	72	32.857	ENSPSIG00000013505	PRDM5	61	32.857
ENSPSIG00000011722	GTF3A	64	32.394	ENSPSIG00000015216	-	69	32.394
ENSPSIG00000011722	GTF3A	71	35.915	ENSPSIG00000013021	-	67	35.915
ENSPSIG00000011722	GTF3A	64	33.099	ENSPSIG00000001739	-	63	33.099
ENSPSIG00000011722	GTF3A	65	33.582	ENSPSIG00000016247	-	52	33.582
ENSPSIG00000011722	GTF3A	71	30.723	ENSPSIG00000000522	-	72	30.723
ENSPSIG00000011722	GTF3A	69	35.211	ENSPSIG00000016380	-	66	35.211
ENSPSIG00000011722	GTF3A	64	34.507	ENSPSIG00000009893	-	50	34.507
ENSPSIG00000011722	GTF3A	64	31.250	ENSPSIG00000004682	ZNF652	52	31.250
ENSPSIG00000011722	GTF3A	71	34.965	ENSPSIG00000004614	-	71	34.965
ENSPSIG00000011722	GTF3A	71	33.333	ENSPSIG00000002569	-	54	32.704
ENSPSIG00000011722	GTF3A	74	32.867	ENSPSIG00000004502	-	57	32.867
ENSPSIG00000011722	GTF3A	77	32.558	ENSPSIG00000000760	-	77	32.667
ENSPSIG00000011722	GTF3A	66	35.652	ENSPSIG00000009603	-	93	35.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011722	GTF3A	99	54.580	ENSAMEG00000015824	GTF3A	91	54.580	Ailuropoda_melanoleuca
ENSPSIG00000011722	GTF3A	84	54.348	ENSBTAG00000012600	GTF3A	82	54.348	Bos_taurus
ENSPSIG00000011722	GTF3A	92	55.466	ENSCAFG00000006794	GTF3A	86	55.466	Canis_familiaris
ENSPSIG00000011722	GTF3A	84	53.913	ENSCHIG00000021040	-	70	53.913	Capra_hircus
ENSPSIG00000011722	GTF3A	84	53.478	ENSCHIG00000010341	-	83	53.478	Capra_hircus
ENSPSIG00000011722	GTF3A	99	52.091	ENSTSYG00000004206	GTF3A	97	52.091	Carlito_syrichta
ENSPSIG00000011722	GTF3A	84	55.652	ENSCAPG00000015862	GTF3A	98	50.655	Cavia_aperea
ENSPSIG00000011722	GTF3A	84	50.655	ENSCPOG00000010143	GTF3A	87	50.655	Cavia_porcellus
ENSPSIG00000011722	GTF3A	75	54.067	ENSCLAG00000003912	GTF3A	84	54.067	Chinchilla_lanigera
ENSPSIG00000011722	GTF3A	99	53.817	ENSDNOG00000037405	-	78	53.817	Dasypus_novemcinctus
ENSPSIG00000011722	GTF3A	71	52.500	ENSETEG00000003225	GTF3A	61	48.291	Echinops_telfairi
ENSPSIG00000011722	GTF3A	99	53.053	ENSEASG00005022495	-	74	53.053	Equus_asinus_asinus
ENSPSIG00000011722	GTF3A	83	56.808	ENSEASG00005013216	-	81	56.808	Equus_asinus_asinus
ENSPSIG00000011722	GTF3A	99	53.053	ENSECAG00000014803	GTF3A	86	53.053	Equus_caballus
ENSPSIG00000011722	GTF3A	99	49.618	ENSECAG00000024825	-	76	49.618	Equus_caballus
ENSPSIG00000011722	GTF3A	99	52.290	ENSEEUG00000004307	GTF3A	81	53.435	Erinaceus_europaeus
ENSPSIG00000011722	GTF3A	99	55.513	ENSFCAG00000006982	GTF3A	76	55.513	Felis_catus
ENSPSIG00000011722	GTF3A	75	53.110	ENSFDAG00000016841	GTF3A	85	53.110	Fukomys_damarensis
ENSPSIG00000011722	GTF3A	79	52.511	ENSHGLG00000004173	GTF3A	87	53.302	Heterocephalus_glaber_female
ENSPSIG00000011722	GTF3A	79	52.511	ENSHGLG00100011561	GTF3A	87	53.302	Heterocephalus_glaber_male
ENSPSIG00000011722	GTF3A	75	52.857	ENSSTOG00000013853	GTF3A	88	52.857	Ictidomys_tridecemlineatus
ENSPSIG00000011722	GTF3A	98	50.192	ENSJJAG00000011501	Gtf3a	99	50.192	Jaculus_jaculus
ENSPSIG00000011722	GTF3A	99	48.120	ENSLAFG00000027315	GTF3A	90	48.120	Loxodonta_africana
ENSPSIG00000011722	GTF3A	84	56.769	ENSMAUG00000016253	Gtf3a	85	54.065	Mesocricetus_auratus
ENSPSIG00000011722	GTF3A	99	53.053	ENSMICG00000014763	GTF3A	95	53.053	Microcebus_murinus
ENSPSIG00000011722	GTF3A	84	56.769	MGP_CAROLIEiJ_G0028031	Gtf3a	90	51.341	Mus_caroli
ENSPSIG00000011722	GTF3A	84	56.769	ENSMUSG00000016503	Gtf3a	90	51.737	Mus_musculus
ENSPSIG00000011722	GTF3A	84	56.957	MGP_PahariEiJ_G0024597	Gtf3a	90	51.923	Mus_pahari
ENSPSIG00000011722	GTF3A	98	51.737	MGP_SPRETEiJ_G0029029	Gtf3a	90	51.737	Mus_spretus
ENSPSIG00000011722	GTF3A	99	52.672	ENSMPUG00000005835	GTF3A	90	52.672	Mustela_putorius_furo
ENSPSIG00000011722	GTF3A	86	57.940	ENSMLUG00000002158	GTF3A	91	57.940	Myotis_lucifugus
ENSPSIG00000011722	GTF3A	99	54.753	ENSNLEG00000000331	GTF3A	90	54.753	Nomascus_leucogenys
ENSPSIG00000011722	GTF3A	99	48.855	ENSMEUG00000010089	GTF3A	76	48.855	Notamacropus_eugenii
ENSPSIG00000011722	GTF3A	95	52.756	ENSOPRG00000000854	-	62	52.756	Ochotona_princeps
ENSPSIG00000011722	GTF3A	99	50.190	ENSODEG00000006725	GTF3A	75	50.394	Octodon_degus
ENSPSIG00000011722	GTF3A	99	53.053	ENSOCUG00000011713	GTF3A	75	53.053	Oryctolagus_cuniculus
ENSPSIG00000011722	GTF3A	99	53.232	ENSOGAG00000014589	GTF3A	90	53.232	Otolemur_garnettii
ENSPSIG00000011722	GTF3A	84	53.913	ENSOARG00000012551	GTF3A	81	53.913	Ovis_aries
ENSPSIG00000011722	GTF3A	99	55.344	ENSPPRG00000002368	GTF3A	91	55.344	Panthera_pardus
ENSPSIG00000011722	GTF3A	99	55.725	ENSPTIG00000018958	GTF3A	81	55.725	Panthera_tigris_altaica
ENSPSIG00000011722	GTF3A	99	54.753	ENSPPYG00000005235	GTF3A	91	54.753	Pongo_abelii
ENSPSIG00000011722	GTF3A	99	52.290	ENSPCOG00000016742	GTF3A	74	52.290	Propithecus_coquereli
ENSPSIG00000011722	GTF3A	99	50.376	ENSPVAG00000012837	GTF3A	78	50.376	Pteropus_vampyrus
ENSPSIG00000011722	GTF3A	99	46.947	ENSRROG00000043264	GTF3A	89	46.947	Rhinopithecus_roxellana
ENSPSIG00000011722	GTF3A	99	57.414	ENSSHAG00000016965	GTF3A	93	57.414	Sarcophilus_harrisii
ENSPSIG00000011722	GTF3A	75	54.286	ENSSARG00000010692	GTF3A	58	54.286	Sorex_araneus
ENSPSIG00000011722	GTF3A	99	66.794	ENSSPUG00000005307	GTF3A	88	66.540	Sphenodon_punctatus
ENSPSIG00000011722	GTF3A	67	42.466	ENSTRUG00000005241	gtf3ab	93	33.735	Takifugu_rubripes
ENSPSIG00000011722	GTF3A	80	54.299	ENSTBEG00000012075	GTF3A	60	54.299	Tupaia_belangeri
ENSPSIG00000011722	GTF3A	99	53.333	ENSTTRG00000008538	GTF3A	79	53.333	Tursiops_truncatus
ENSPSIG00000011722	GTF3A	99	54.580	ENSUAMG00000019189	GTF3A	91	54.580	Ursus_americanus
ENSPSIG00000011722	GTF3A	99	54.753	ENSUMAG00000016941	GTF3A	98	54.753	Ursus_maritimus
ENSPSIG00000011722	GTF3A	98	52.308	ENSVPAG00000004995	GTF3A	98	52.308	Vicugna_pacos
ENSPSIG00000011722	GTF3A	99	54.962	ENSVVUG00000009197	GTF3A	91	54.962	Vulpes_vulpes