EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000011822 (Gene tree)
Gene ID: 102449323
Gene Symbol: POLR1D
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 7924 bases
Position: chrJH205391.1:282568-290491
Accession: 102449323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013152	RNA_pol_L_2	PF13656.6	1.2e-28	1	1
ENSPSIP00000013152	RNA_pol_L	PF01193.24	5.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013215	POLR1D-201	529	XM_006111340	ENSPSIP00000013152	129 (aa)	-	K7FYP2

Gene Model

Click here to download ENSPSIG00000011822's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03020	RNA polymerase	KEGG
pss04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000011822	POLR1D	65	34.524	ENSPSIG00000010173	-	83	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011822	POLR1D	91	72.650	ENSG00000186184	POLR1D	96	74.775	Homo_sapiens
ENSPSIG00000011822	POLR1D	81	71.154	ENSAPOG00000021882	polr1d	96	72.549	Acanthochromis_polyacanthus
ENSPSIG00000011822	POLR1D	91	73.504	ENSAMEG00000019095	POLR1D	93	73.504	Ailuropoda_melanoleuca
ENSPSIG00000011822	POLR1D	88	73.043	ENSACIG00000013328	polr1d	100	73.043	Amphilophus_citrinellus
ENSPSIG00000011822	POLR1D	88	71.053	ENSAOCG00000018500	polr1d	100	71.053	Amphiprion_ocellaris
ENSPSIG00000011822	POLR1D	88	70.175	ENSAPEG00000009489	polr1d	100	70.175	Amphiprion_percula
ENSPSIG00000011822	POLR1D	88	70.175	ENSATEG00000019322	polr1d	100	70.175	Anabas_testudineus
ENSPSIG00000011822	POLR1D	87	72.321	ENSACAG00000015753	POLR1D	97	72.321	Anolis_carolinensis
ENSPSIG00000011822	POLR1D	91	72.650	ENSANAG00000024486	POLR1D	87	72.650	Aotus_nancymaae
ENSPSIG00000011822	POLR1D	88	72.807	ENSACLG00000023805	polr1d	100	72.807	Astatotilapia_calliptera
ENSPSIG00000011822	POLR1D	88	69.912	ENSAMXG00000036118	polr1d	98	69.912	Astyanax_mexicanus
ENSPSIG00000011822	POLR1D	91	73.504	ENSBTAG00000008642	POLR1D	87	73.504	Bos_taurus
ENSPSIG00000011822	POLR1D	91	73.504	ENSBTAG00000033252	-	87	73.504	Bos_taurus
ENSPSIG00000011822	POLR1D	62	41.250	WBGene00010230	rpac-19	56	41.250	Caenorhabditis_elegans
ENSPSIG00000011822	POLR1D	91	72.650	ENSCJAG00000044669	POLR1D	87	72.650	Callithrix_jacchus
ENSPSIG00000011822	POLR1D	91	73.504	ENSCAFG00000006755	POLR1D	87	73.504	Canis_familiaris
ENSPSIG00000011822	POLR1D	91	74.359	ENSCHIG00000021910	POLR1D	87	74.359	Capra_hircus
ENSPSIG00000011822	POLR1D	86	72.072	ENSTSYG00000026817	-	83	72.072	Carlito_syrichta
ENSPSIG00000011822	POLR1D	82	64.815	ENSTSYG00000034852	-	89	64.815	Carlito_syrichta
ENSPSIG00000011822	POLR1D	50	72.308	ENSCAPG00000006058	-	66	72.308	Cavia_aperea
ENSPSIG00000011822	POLR1D	51	72.727	ENSCPOG00000030450	-	67	72.727	Cavia_porcellus
ENSPSIG00000011822	POLR1D	91	73.504	ENSCCAG00000021349	-	87	73.504	Cebus_capucinus
ENSPSIG00000011822	POLR1D	91	56.410	ENSCCAG00000020191	-	86	56.410	Cebus_capucinus
ENSPSIG00000011822	POLR1D	82	68.868	ENSCATG00000022900	-	79	68.868	Cercocebus_atys
ENSPSIG00000011822	POLR1D	91	72.650	ENSCATG00000030710	-	87	72.650	Cercocebus_atys
ENSPSIG00000011822	POLR1D	91	72.650	ENSCLAG00000017623	POLR1D	94	72.650	Chinchilla_lanigera
ENSPSIG00000011822	POLR1D	78	85.000	ENSCPBG00000004719	POLR1D	99	85.000	Chrysemys_picta_bellii
ENSPSIG00000011822	POLR1D	86	74.775	ENSCANG00000028632	-	83	74.775	Colobus_angolensis_palliatus
ENSPSIG00000011822	POLR1D	86	72.973	ENSCANG00000037694	-	83	72.973	Colobus_angolensis_palliatus
ENSPSIG00000011822	POLR1D	91	73.504	ENSCGRG00001021251	Polr1d	87	73.504	Cricetulus_griseus_chok1gshd
ENSPSIG00000011822	POLR1D	91	73.504	ENSCGRG00000011639	Polr1d	87	73.504	Cricetulus_griseus_crigri
ENSPSIG00000011822	POLR1D	82	72.642	ENSCSEG00000018268	polr1d	94	71.818	Cynoglossus_semilaevis
ENSPSIG00000011822	POLR1D	88	74.561	ENSCVAG00000018527	polr1d	100	74.561	Cyprinodon_variegatus
ENSPSIG00000011822	POLR1D	86	72.072	ENSDARG00000037570	polr1d	98	72.072	Danio_rerio
ENSPSIG00000011822	POLR1D	87	73.214	ENSDNOG00000046247	-	83	73.214	Dasypus_novemcinctus
ENSPSIG00000011822	POLR1D	87	74.107	ENSDNOG00000043676	-	83	74.107	Dasypus_novemcinctus
ENSPSIG00000011822	POLR1D	91	73.504	ENSDORG00000029155	Polr1d	87	73.504	Dipodomys_ordii
ENSPSIG00000011822	POLR1D	66	45.882	FBgn0086447	l(2)37Cg	80	45.882	Drosophila_melanogaster
ENSPSIG00000011822	POLR1D	91	71.795	ENSETEG00000012797	POLR1D	94	71.795	Echinops_telfairi
ENSPSIG00000011822	POLR1D	71	67.391	ENSEBUG00000011748	polr1d	64	67.391	Eptatretus_burgeri
ENSPSIG00000011822	POLR1D	87	75.893	ENSEASG00005022487	POLR1D	86	75.893	Equus_asinus_asinus
ENSPSIG00000011822	POLR1D	91	72.650	ENSEEUG00000013144	POLR1D	94	72.650	Erinaceus_europaeus
ENSPSIG00000011822	POLR1D	83	72.897	ENSELUG00000005105	rpac2	94	72.897	Esox_lucius
ENSPSIG00000011822	POLR1D	91	73.504	ENSFCAG00000030162	POLR1D	87	73.504	Felis_catus
ENSPSIG00000011822	POLR1D	78	79.000	ENSFALG00000011463	POLR1D	99	79.000	Ficedula_albicollis
ENSPSIG00000011822	POLR1D	91	71.795	ENSFDAG00000004463	POLR1D	87	71.795	Fukomys_damarensis
ENSPSIG00000011822	POLR1D	89	73.043	ENSFHEG00000015410	polr1d	100	73.043	Fundulus_heteroclitus
ENSPSIG00000011822	POLR1D	52	73.134	ENSGALG00000007470	POLR1D	66	73.134	Gallus_gallus
ENSPSIG00000011822	POLR1D	88	72.807	ENSGAFG00000001693	polr1d	100	72.807	Gambusia_affinis
ENSPSIG00000011822	POLR1D	85	72.727	ENSGACG00000018585	polr1d	93	72.727	Gasterosteus_aculeatus
ENSPSIG00000011822	POLR1D	88	85.088	ENSGAGG00000008503	POLR1D	100	85.088	Gopherus_agassizii
ENSPSIG00000011822	POLR1D	91	72.650	ENSGGOG00000004235	POLR1D	87	72.650	Gorilla_gorilla
ENSPSIG00000011822	POLR1D	88	72.807	ENSHBUG00000002111	polr1d	100	72.807	Haplochromis_burtoni
ENSPSIG00000011822	POLR1D	91	70.940	ENSHGLG00000003202	POLR1D	87	70.940	Heterocephalus_glaber_female
ENSPSIG00000011822	POLR1D	91	70.940	ENSHGLG00100009393	POLR1D	87	70.940	Heterocephalus_glaber_male
ENSPSIG00000011822	POLR1D	88	69.298	ENSHCOG00000003258	polr1d	100	69.298	Hippocampus_comes
ENSPSIG00000011822	POLR1D	86	74.775	ENSIPUG00000014810	polr1d	97	74.775	Ictalurus_punctatus
ENSPSIG00000011822	POLR1D	91	72.650	ENSSTOG00000013877	POLR1D	87	72.650	Ictidomys_tridecemlineatus
ENSPSIG00000011822	POLR1D	91	70.940	ENSJJAG00000022671	-	97	70.940	Jaculus_jaculus
ENSPSIG00000011822	POLR1D	86	58.559	ENSJJAG00000021667	-	65	58.559	Jaculus_jaculus
ENSPSIG00000011822	POLR1D	88	72.807	ENSKMAG00000015256	polr1d	100	72.807	Kryptolebias_marmoratus
ENSPSIG00000011822	POLR1D	88	72.807	ENSLBEG00000015919	polr1d	100	72.807	Labrus_bergylta
ENSPSIG00000011822	POLR1D	85	70.270	ENSLACG00000006810	POLR1D	92	70.270	Latimeria_chalumnae
ENSPSIG00000011822	POLR1D	53	82.609	ENSLOCG00000014976	polr1d	93	82.609	Lepisosteus_oculatus
ENSPSIG00000011822	POLR1D	82	77.358	ENSLAFG00000032290	POLR1D	80	77.358	Loxodonta_africana
ENSPSIG00000011822	POLR1D	91	72.650	ENSMFAG00000045264	POLR1D	90	72.650	Macaca_fascicularis
ENSPSIG00000011822	POLR1D	86	74.775	ENSMMUG00000020386	POLR1D	96	74.775	Macaca_mulatta
ENSPSIG00000011822	POLR1D	67	73.256	ENSMMUG00000041570	-	77	73.256	Macaca_mulatta
ENSPSIG00000011822	POLR1D	91	72.650	ENSMNEG00000008630	-	87	72.650	Macaca_nemestrina
ENSPSIG00000011822	POLR1D	67	70.930	ENSMNEG00000038120	-	72	70.930	Macaca_nemestrina
ENSPSIG00000011822	POLR1D	91	72.650	ENSMLEG00000041048	-	87	72.650	Mandrillus_leucophaeus
ENSPSIG00000011822	POLR1D	86	63.964	ENSMLEG00000032251	-	83	63.964	Mandrillus_leucophaeus
ENSPSIG00000011822	POLR1D	80	73.786	ENSMAMG00000014834	polr1d	96	73.786	Mastacembelus_armatus
ENSPSIG00000011822	POLR1D	79	75.490	ENSMZEG00005006638	polr1d	90	75.490	Maylandia_zebra
ENSPSIG00000011822	POLR1D	67	82.759	ENSMGAG00000005322	POLR1D	80	82.759	Meleagris_gallopavo
ENSPSIG00000011822	POLR1D	91	73.504	ENSMAUG00000001946	Polr1d	87	73.504	Mesocricetus_auratus
ENSPSIG00000011822	POLR1D	91	73.504	ENSMICG00000016883	-	87	73.504	Microcebus_murinus
ENSPSIG00000011822	POLR1D	91	57.265	ENSMICG00000007349	-	87	57.265	Microcebus_murinus
ENSPSIG00000011822	POLR1D	91	72.650	ENSMOCG00000021288	Polr1d	87	72.650	Microtus_ochrogaster
ENSPSIG00000011822	POLR1D	88	71.930	ENSMMOG00000009605	polr1d	100	71.930	Mola_mola
ENSPSIG00000011822	POLR1D	88	81.579	ENSMODG00000023881	POLR1D	100	81.579	Monodelphis_domestica
ENSPSIG00000011822	POLR1D	88	68.421	ENSMALG00000010652	polr1d	100	68.421	Monopterus_albus
ENSPSIG00000011822	POLR1D	91	71.795	MGP_CAROLIEiJ_G0028034	Polr1d	87	71.795	Mus_caroli
ENSPSIG00000011822	POLR1D	91	71.795	ENSMUSG00000029642	Polr1d	87	71.795	Mus_musculus
ENSPSIG00000011822	POLR1D	87	74.107	MGP_PahariEiJ_G0024600	Polr1d	83	74.107	Mus_pahari
ENSPSIG00000011822	POLR1D	91	70.940	MGP_SPRETEiJ_G0029032	Polr1d	87	70.940	Mus_spretus
ENSPSIG00000011822	POLR1D	91	72.650	ENSMLUG00000027169	-	87	72.650	Myotis_lucifugus
ENSPSIG00000011822	POLR1D	86	70.270	ENSMLUG00000004118	-	83	70.270	Myotis_lucifugus
ENSPSIG00000011822	POLR1D	86	76.577	ENSNGAG00000006014	Polr1d	96	76.577	Nannospalax_galili
ENSPSIG00000011822	POLR1D	88	72.807	ENSNBRG00000020327	polr1d	100	72.807	Neolamprologus_brichardi
ENSPSIG00000011822	POLR1D	91	72.650	ENSNLEG00000000358	POLR1D	87	72.650	Nomascus_leucogenys
ENSPSIG00000011822	POLR1D	86	63.063	ENSODEG00000014801	-	81	63.063	Octodon_degus
ENSPSIG00000011822	POLR1D	86	74.775	ENSODEG00000005294	-	83	74.775	Octodon_degus
ENSPSIG00000011822	POLR1D	84	82.407	ENSOANG00000008708	-	100	82.407	Ornithorhynchus_anatinus
ENSPSIG00000011822	POLR1D	91	72.650	ENSOCUG00000015706	POLR1D	71	72.650	Oryctolagus_cuniculus
ENSPSIG00000011822	POLR1D	88	70.175	ENSORLG00000010257	polr1d	100	70.175	Oryzias_latipes
ENSPSIG00000011822	POLR1D	89	69.565	ENSORLG00020000533	polr1d	78	69.565	Oryzias_latipes_hni
ENSPSIG00000011822	POLR1D	89	70.435	ENSORLG00015013267	polr1d	76	70.435	Oryzias_latipes_hsok
ENSPSIG00000011822	POLR1D	89	69.565	ENSOMEG00000014912	polr1d	77	69.565	Oryzias_melastigma
ENSPSIG00000011822	POLR1D	91	72.650	ENSOGAG00000014601	POLR1D	87	72.650	Otolemur_garnettii
ENSPSIG00000011822	POLR1D	91	74.359	ENSOARG00000017005	POLR1D	89	74.359	Ovis_aries
ENSPSIG00000011822	POLR1D	87	75.000	ENSPPAG00000028138	POLR1D	83	75.000	Pan_paniscus
ENSPSIG00000011822	POLR1D	91	73.504	ENSPPRG00000003381	POLR1D	87	73.504	Panthera_pardus
ENSPSIG00000011822	POLR1D	91	73.504	ENSPTIG00000018137	POLR1D	87	73.504	Panthera_tigris_altaica
ENSPSIG00000011822	POLR1D	91	72.650	ENSPTRG00000005734	POLR1D	87	72.650	Pan_troglodytes
ENSPSIG00000011822	POLR1D	91	72.650	ENSPANG00000020259	-	87	72.650	Papio_anubis
ENSPSIG00000011822	POLR1D	86	63.964	ENSPANG00000035051	-	83	63.964	Papio_anubis
ENSPSIG00000011822	POLR1D	76	76.531	ENSPKIG00000021891	polr1d	95	57.500	Paramormyrops_kingsleyae
ENSPSIG00000011822	POLR1D	83	62.617	ENSPMGG00000012998	POLR1D	78	62.617	Periophthalmus_magnuspinnatus
ENSPSIG00000011822	POLR1D	83	71.028	ENSPMGG00000010359	polr1d	93	71.028	Periophthalmus_magnuspinnatus
ENSPSIG00000011822	POLR1D	96	68.548	ENSPEMG00000006336	-	95	68.548	Peromyscus_maniculatus_bairdii
ENSPSIG00000011822	POLR1D	75	63.918	ENSPMAG00000004228	polr1d	81	63.918	Petromyzon_marinus
ENSPSIG00000011822	POLR1D	88	80.702	ENSPCIG00000001673	POLR1D	100	80.702	Phascolarctos_cinereus
ENSPSIG00000011822	POLR1D	88	73.684	ENSPFOG00000023343	polr1d	100	74.713	Poecilia_formosa
ENSPSIG00000011822	POLR1D	88	73.684	ENSPLAG00000009675	polr1d	100	73.684	Poecilia_latipinna
ENSPSIG00000011822	POLR1D	88	73.684	ENSPMEG00000004628	polr1d	100	73.684	Poecilia_mexicana
ENSPSIG00000011822	POLR1D	88	73.684	ENSPREG00000022032	polr1d	100	73.684	Poecilia_reticulata
ENSPSIG00000011822	POLR1D	91	72.650	ENSPCOG00000028175	POLR1D	87	72.650	Propithecus_coquereli
ENSPSIG00000011822	POLR1D	88	72.807	ENSPNYG00000000107	polr1d	100	72.807	Pundamilia_nyererei
ENSPSIG00000011822	POLR1D	83	69.159	ENSPNAG00000001512	polr1d	92	68.182	Pygocentrus_nattereri
ENSPSIG00000011822	POLR1D	91	72.650	ENSRBIG00000036378	-	87	72.650	Rhinopithecus_bieti
ENSPSIG00000011822	POLR1D	86	72.072	ENSRBIG00000000336	-	83	72.072	Rhinopithecus_bieti
ENSPSIG00000011822	POLR1D	86	72.973	ENSRROG00000026751	-	83	72.973	Rhinopithecus_roxellana
ENSPSIG00000011822	POLR1D	91	72.650	ENSRROG00000042232	-	87	72.650	Rhinopithecus_roxellana
ENSPSIG00000011822	POLR1D	71	57.143	YNL113W	RPC19	64	57.143	Saccharomyces_cerevisiae
ENSPSIG00000011822	POLR1D	91	72.650	ENSSBOG00000028482	-	87	72.650	Saimiri_boliviensis_boliviensis
ENSPSIG00000011822	POLR1D	90	65.517	ENSSBOG00000030146	-	79	65.517	Saimiri_boliviensis_boliviensis
ENSPSIG00000011822	POLR1D	93	75.000	ENSSHAG00000001190	POLR1D	93	75.000	Sarcophilus_harrisii
ENSPSIG00000011822	POLR1D	89	73.913	ENSSFOG00015011375	polr1d	99	73.913	Scleropages_formosus
ENSPSIG00000011822	POLR1D	88	71.053	ENSSMAG00000011861	polr1d	100	71.053	Scophthalmus_maximus
ENSPSIG00000011822	POLR1D	88	71.053	ENSSDUG00000011930	polr1d	100	71.053	Seriola_dumerili
ENSPSIG00000011822	POLR1D	81	71.429	ENSSLDG00000023871	polr1d	89	71.429	Seriola_lalandi_dorsalis
ENSPSIG00000011822	POLR1D	87	75.893	ENSSARG00000007840	POLR1D	83	75.893	Sorex_araneus
ENSPSIG00000011822	POLR1D	81	80.952	ENSSPUG00000005786	POLR1D	96	78.571	Sphenodon_punctatus
ENSPSIG00000011822	POLR1D	88	71.930	ENSSPAG00000011764	polr1d	100	71.930	Stegastes_partitus
ENSPSIG00000011822	POLR1D	86	74.775	ENSSSCG00000009310	POLR1D	83	74.775	Sus_scrofa
ENSPSIG00000011822	POLR1D	74	79.167	ENSTGUG00000005450	POLR1D	100	79.167	Taeniopygia_guttata
ENSPSIG00000011822	POLR1D	88	69.298	ENSTRUG00000019741	polr1d	100	69.298	Takifugu_rubripes
ENSPSIG00000011822	POLR1D	91	71.795	ENSTBEG00000007006	POLR1D	94	71.795	Tupaia_belangeri
ENSPSIG00000011822	POLR1D	91	73.504	ENSUAMG00000011413	POLR1D	87	73.504	Ursus_americanus
ENSPSIG00000011822	POLR1D	91	73.504	ENSUMAG00000016968	POLR1D	91	73.504	Ursus_maritimus
ENSPSIG00000011822	POLR1D	91	73.504	ENSVVUG00000009216	POLR1D	87	73.504	Vulpes_vulpes
ENSPSIG00000011822	POLR1D	78	78.000	ENSXCOG00000011731	polr1d	77	78.000	Xiphophorus_couchianus
ENSPSIG00000011822	POLR1D	78	78.000	ENSXMAG00000017538	polr1d	77	78.000	Xiphophorus_maculatus