EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000011896 (Gene tree)
Gene ID: 102462402
Gene Symbol: ZIC3
Alias: -
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 3979 bases
Position: chrJH206741.1:5580316-5584294
Accession: 102462402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013245	zf-C2H2	PF00096.26	1.5e-22	1	4
ENSPSIP00000013245	zf-C2H2	PF00096.26	1.5e-22	2	4
ENSPSIP00000013245	zf-C2H2	PF00096.26	1.5e-22	3	4
ENSPSIP00000013245	zf-C2H2	PF00096.26	1.5e-22	4	4
ENSPSIP00000013245	zf-met	PF12874.7	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013308	ZIC3-201	2110	XM_006115446	ENSPSIP00000013245	293 (aa)	XP_006115508	K7FYY5

Gene Model

Click here to download ENSPSIG00000011896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000011896	ZIC3	61	40.559	ENSPSIG00000012650	-	73	40.559
ENSPSIG00000011896	ZIC3	67	43.210	ENSPSIG00000012865	-	71	43.210
ENSPSIG00000011896	ZIC3	74	43.548	ENSPSIG00000016247	-	53	43.548
ENSPSIG00000011896	ZIC3	62	39.450	ENSPSIG00000006586	-	91	39.450
ENSPSIG00000011896	ZIC3	61	33.523	ENSPSIG00000008734	GFI1	51	34.400
ENSPSIG00000011896	ZIC3	55	41.071	ENSPSIG00000004614	-	86	41.071
ENSPSIG00000011896	ZIC3	55	44.118	ENSPSIG00000009650	-	68	44.118
ENSPSIG00000011896	ZIC3	57	42.202	ENSPSIG00000008588	-	100	42.202
ENSPSIG00000011896	ZIC3	64	51.852	ENSPSIG00000015465	-	72	51.852
ENSPSIG00000011896	ZIC3	55	52.830	ENSPSIG00000001026	-	90	52.830
ENSPSIG00000011896	ZIC3	60	45.192	ENSPSIG00000003152	-	77	37.984
ENSPSIG00000011896	ZIC3	60	40.566	ENSPSIG00000004682	ZNF652	62	40.566
ENSPSIG00000011896	ZIC3	54	37.762	ENSPSIG00000013505	PRDM5	57	38.532
ENSPSIG00000011896	ZIC3	57	44.186	ENSPSIG00000004303	ZNF319	81	44.186
ENSPSIG00000011896	ZIC3	50	45.872	ENSPSIG00000000333	-	76	45.872
ENSPSIG00000011896	ZIC3	56	41.176	ENSPSIG00000000760	-	83	41.176
ENSPSIG00000011896	ZIC3	50	45.872	ENSPSIG00000005672	-	62	45.872
ENSPSIG00000011896	ZIC3	57	37.762	ENSPSIG00000000672	-	85	37.762
ENSPSIG00000011896	ZIC3	62	38.393	ENSPSIG00000005522	ZNF646	97	38.393
ENSPSIG00000011896	ZIC3	50	40.741	ENSPSIG00000000522	-	73	40.741
ENSPSIG00000011896	ZIC3	50	43.363	ENSPSIG00000009893	-	59	43.363
ENSPSIG00000011896	ZIC3	50	42.202	ENSPSIG00000009603	-	99	42.202
ENSPSIG00000011896	ZIC3	57	42.478	ENSPSIG00000016380	-	71	42.478
ENSPSIG00000011896	ZIC3	54	38.776	ENSPSIG00000006790	-	90	38.776
ENSPSIG00000011896	ZIC3	55	41.071	ENSPSIG00000010328	-	66	41.071
ENSPSIG00000011896	ZIC3	50	42.202	ENSPSIG00000015216	-	70	42.202
ENSPSIG00000011896	ZIC3	57	40.206	ENSPSIG00000002569	-	69	40.206
ENSPSIG00000011896	ZIC3	54	46.512	ENSPSIG00000005128	-	99	46.512
ENSPSIG00000011896	ZIC3	72	39.583	ENSPSIG00000004647	-	55	43.243
ENSPSIG00000011896	ZIC3	59	43.820	ENSPSIG00000015459	-	69	43.820
ENSPSIG00000011896	ZIC3	55	38.384	ENSPSIG00000009270	-	66	38.393
ENSPSIG00000011896	ZIC3	50	44.643	ENSPSIG00000010405	-	99	44.643
ENSPSIG00000011896	ZIC3	50	41.284	ENSPSIG00000004502	-	52	41.284
ENSPSIG00000011896	ZIC3	50	45.872	ENSPSIG00000005603	-	64	45.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011896	ZIC3	99	90.068	ENSG00000156925	ZIC3	62	90.068	Homo_sapiens
ENSPSIG00000011896	ZIC3	99	90.068	ENSANAG00000019614	ZIC3	62	90.068	Aotus_nancymaae
ENSPSIG00000011896	ZIC3	99	90.068	ENSCJAG00000013792	ZIC3	62	90.068	Callithrix_jacchus
ENSPSIG00000011896	ZIC3	99	90.068	ENSCAFG00000018979	ZIC3	62	90.068	Canis_familiaris
ENSPSIG00000011896	ZIC3	99	90.068	ENSTSYG00000003356	ZIC3	62	90.068	Carlito_syrichta
ENSPSIG00000011896	ZIC3	85	92.369	ENSCPOG00000002374	ZIC3	100	92.369	Cavia_porcellus
ENSPSIG00000011896	ZIC3	99	90.068	ENSCCAG00000025983	ZIC3	62	90.068	Cebus_capucinus
ENSPSIG00000011896	ZIC3	99	90.068	ENSCATG00000036569	ZIC3	62	90.068	Cercocebus_atys
ENSPSIG00000011896	ZIC3	99	90.068	ENSCLAG00000001934	ZIC3	62	90.068	Chinchilla_lanigera
ENSPSIG00000011896	ZIC3	99	96.220	ENSCPBG00000026115	ZIC3	68	96.220	Chrysemys_picta_bellii
ENSPSIG00000011896	ZIC3	99	90.068	ENSCANG00000017505	ZIC3	62	90.068	Colobus_angolensis_palliatus
ENSPSIG00000011896	ZIC3	99	90.753	ENSCGRG00001024527	Zic3	62	90.753	Cricetulus_griseus_chok1gshd
ENSPSIG00000011896	ZIC3	99	90.411	ENSDORG00000025481	Zic3	62	90.411	Dipodomys_ordii
ENSPSIG00000011896	ZIC3	99	90.068	ENSFCAG00000025684	ZIC3	62	90.068	Felis_catus
ENSPSIG00000011896	ZIC3	99	90.753	ENSFDAG00000014929	ZIC3	100	93.574	Fukomys_damarensis
ENSPSIG00000011896	ZIC3	91	87.313	ENSGAGG00000004149	ZIC3	56	87.313	Gopherus_agassizii
ENSPSIG00000011896	ZIC3	99	90.068	ENSGGOG00000011914	ZIC3	62	90.068	Gorilla_gorilla
ENSPSIG00000011896	ZIC3	99	90.411	ENSHGLG00000006298	ZIC3	62	90.411	Heterocephalus_glaber_female
ENSPSIG00000011896	ZIC3	99	58.219	ENSHGLG00100002829	ZIC3	90	64.384	Heterocephalus_glaber_male
ENSPSIG00000011896	ZIC3	99	90.411	ENSJJAG00000022714	Zic3	62	90.411	Jaculus_jaculus
ENSPSIG00000011896	ZIC3	99	86.942	ENSLACG00000014597	ZIC3	65	86.942	Latimeria_chalumnae
ENSPSIG00000011896	ZIC3	99	89.384	ENSLAFG00000007048	ZIC3	75	89.384	Loxodonta_africana
ENSPSIG00000011896	ZIC3	99	90.068	ENSMFAG00000027018	ZIC3	62	90.068	Macaca_fascicularis
ENSPSIG00000011896	ZIC3	79	91.379	ENSMMUG00000002023	ZIC3	50	91.379	Macaca_mulatta
ENSPSIG00000011896	ZIC3	99	90.068	ENSMNEG00000040682	ZIC3	62	90.068	Macaca_nemestrina
ENSPSIG00000011896	ZIC3	99	90.068	ENSMLEG00000004378	ZIC3	62	90.068	Mandrillus_leucophaeus
ENSPSIG00000011896	ZIC3	99	90.753	ENSMAUG00000009402	Zic3	62	90.753	Mesocricetus_auratus
ENSPSIG00000011896	ZIC3	99	90.068	ENSMICG00000042529	ZIC3	62	90.068	Microcebus_murinus
ENSPSIG00000011896	ZIC3	99	90.411	ENSMOCG00000020544	Zic3	62	90.411	Microtus_ochrogaster
ENSPSIG00000011896	ZIC3	99	90.753	MGP_CAROLIEiJ_G0033101	Zic3	100	93.574	Mus_caroli
ENSPSIG00000011896	ZIC3	99	90.753	ENSMUSG00000067860	Zic3	100	93.574	Mus_musculus
ENSPSIG00000011896	ZIC3	99	90.753	MGP_PahariEiJ_G0031644	Zic3	100	93.574	Mus_pahari
ENSPSIG00000011896	ZIC3	99	90.753	MGP_SPRETEiJ_G0034256	Zic3	100	93.574	Mus_spretus
ENSPSIG00000011896	ZIC3	99	91.096	ENSNGAG00000023346	Zic3	62	91.096	Nannospalax_galili
ENSPSIG00000011896	ZIC3	97	90.141	ENSNLEG00000003005	-	78	90.141	Nomascus_leucogenys
ENSPSIG00000011896	ZIC3	99	90.068	ENSODEG00000005556	ZIC3	62	90.068	Octodon_degus
ENSPSIG00000011896	ZIC3	99	90.068	ENSPPAG00000030013	ZIC3	62	90.068	Pan_paniscus
ENSPSIG00000011896	ZIC3	99	89.726	ENSPPRG00000010839	ZIC3	62	89.726	Panthera_pardus
ENSPSIG00000011896	ZIC3	99	90.068	ENSPTRG00000043849	ZIC3	62	90.068	Pan_troglodytes
ENSPSIG00000011896	ZIC3	99	90.068	ENSPANG00000011357	ZIC3	62	90.068	Papio_anubis
ENSPSIG00000011896	ZIC3	99	83.562	ENSPKIG00000017705	zic3	65	83.562	Paramormyrops_kingsleyae
ENSPSIG00000011896	ZIC3	99	90.753	ENSPEMG00000022168	Zic3	62	90.753	Peromyscus_maniculatus_bairdii
ENSPSIG00000011896	ZIC3	99	89.726	ENSPCOG00000021557	ZIC3	62	89.726	Propithecus_coquereli
ENSPSIG00000011896	ZIC3	99	90.753	ENSRNOG00000000861	Zic3	62	90.753	Rattus_norvegicus
ENSPSIG00000011896	ZIC3	99	90.068	ENSRBIG00000030660	ZIC3	62	90.068	Rhinopithecus_bieti
ENSPSIG00000011896	ZIC3	99	90.068	ENSRROG00000028410	ZIC3	62	90.068	Rhinopithecus_roxellana
ENSPSIG00000011896	ZIC3	99	90.411	ENSSBOG00000024684	ZIC3	62	90.411	Saimiri_boliviensis_boliviensis
ENSPSIG00000011896	ZIC3	99	84.932	ENSSFOG00015008079	zic3	73	84.932	Scleropages_formosus
ENSPSIG00000011896	ZIC3	99	82.594	ENSSFOG00015011731	zic3	65	82.594	Scleropages_formosus
ENSPSIG00000011896	ZIC3	99	90.444	ENSTGUG00000002155	ZIC3	75	90.444	Taeniopygia_guttata
ENSPSIG00000011896	ZIC3	99	90.068	ENSVVUG00000021378	ZIC3	62	90.068	Vulpes_vulpes
ENSPSIG00000011896	ZIC3	99	85.666	ENSXETG00000024458	zic3	66	85.666	Xenopus_tropicalis