EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000011959 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 2-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 967 bases
Position: chrJH212188.1:50529-51495
Accession: 102444712
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013294	RRM_1	PF00076.22	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013357	-	584	XM_006134382	ENSPSIP00000013294	127 (aa)	-	K7FZ34

Gene Model

Click here to download ENSPSIG00000011959's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000011959's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000011959	-	91	64.000	ENSPSIG00000003404	PABPN1L	62	65.812

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000011959	-	86	87.179	ENSG00000100836	PABPN1	73	91.429	Homo_sapiens
ENSPSIG00000011959	-	94	77.444	ENSAPOG00000016425	pabpn1	50	84.348	Acanthochromis_polyacanthus
ENSPSIG00000011959	-	86	87.179	ENSAMEG00000007048	BCL2L2-PABPN1	62	87.179	Ailuropoda_melanoleuca
ENSPSIG00000011959	-	91	81.301	ENSACIG00000021744	pabpn1	76	77.612	Amphilophus_citrinellus
ENSPSIG00000011959	-	84	84.348	ENSAOCG00000015805	pabpn1	50	84.348	Amphiprion_ocellaris
ENSPSIG00000011959	-	84	84.348	ENSAPEG00000009623	pabpn1	50	84.348	Amphiprion_percula
ENSPSIG00000011959	-	84	84.348	ENSATEG00000020531	pabpn1	58	76.866	Anabas_testudineus
ENSPSIG00000011959	-	84	84.348	ENSAMXG00000000452	pabpn1	65	84.348	Astyanax_mexicanus
ENSPSIG00000011959	-	69	65.625	WBGene00003904	pabp-2	55	61.062	Caenorhabditis_elegans
ENSPSIG00000011959	-	86	84.615	ENSCJAG00000004407	-	59	84.615	Callithrix_jacchus
ENSPSIG00000011959	-	86	87.179	ENSTSYG00000033996	BCL2L2-PABPN1	66	87.179	Carlito_syrichta
ENSPSIG00000011959	-	83	88.496	ENSCAPG00000009461	-	81	88.496	Cavia_aperea
ENSPSIG00000011959	-	86	92.308	ENSCPBG00000026060	-	66	92.308	Chrysemys_picta_bellii
ENSPSIG00000011959	-	70	63.918	ENSCSAVG00000002001	-	65	65.138	Ciona_savignyi
ENSPSIG00000011959	-	86	87.179	ENSCANG00000009750	BCL2L2-PABPN1	66	87.179	Colobus_angolensis_palliatus
ENSPSIG00000011959	-	86	88.034	ENSCGRG00001019696	Pabpn1	66	88.034	Cricetulus_griseus_chok1gshd
ENSPSIG00000011959	-	86	88.034	ENSCGRG00000011102	Pabpn1	68	90.826	Cricetulus_griseus_crigri
ENSPSIG00000011959	-	95	75.373	ENSCSEG00000008774	pabpn1	58	75.373	Cynoglossus_semilaevis
ENSPSIG00000011959	-	78	85.047	ENSCVAG00000003152	pabpn1	52	80.328	Cyprinodon_variegatus
ENSPSIG00000011959	-	95	76.119	ENSDARG00000045373	pabpn1	62	76.119	Danio_rerio
ENSPSIG00000011959	-	80	62.727	ENSDARG00000087996	pabpn1l	68	62.727	Danio_rerio
ENSPSIG00000011959	-	77	83.019	ENSDORG00000023928	-	74	83.019	Dipodomys_ordii
ENSPSIG00000011959	-	83	67.257	FBgn0005648	Pabp2	50	67.257	Drosophila_melanogaster
ENSPSIG00000011959	-	96	69.853	ENSEBUG00000002322	pabpn1	59	69.853	Eptatretus_burgeri
ENSPSIG00000011959	-	86	86.325	ENSFDAG00000018381	BCL2L2-PABPN1	66	86.325	Fukomys_damarensis
ENSPSIG00000011959	-	78	85.047	ENSGAFG00000017099	pabpn1	58	75.000	Gambusia_affinis
ENSPSIG00000011959	-	90	68.852	ENSGGOG00000025919	-	79	68.852	Gorilla_gorilla
ENSPSIG00000011959	-	91	81.301	ENSHBUG00000019523	pabpn1	58	77.612	Haplochromis_burtoni
ENSPSIG00000011959	-	82	72.321	ENSHGLG00000009842	-	62	72.321	Heterocephalus_glaber_female
ENSPSIG00000011959	-	83	88.596	ENSHGLG00000002927	-	69	88.991	Heterocephalus_glaber_female
ENSPSIG00000011959	-	75	86.408	ENSHGLG00100018935	-	60	86.408	Heterocephalus_glaber_male
ENSPSIG00000011959	-	86	86.325	ENSHGLG00100006673	-	69	88.991	Heterocephalus_glaber_male
ENSPSIG00000011959	-	84	83.478	ENSHCOG00000004655	pabpn1	58	76.119	Hippocampus_comes
ENSPSIG00000011959	-	84	83.478	ENSIPUG00000008085	PABPN1	58	76.119	Ictalurus_punctatus
ENSPSIG00000011959	-	84	81.739	ENSIPUG00000000180	-	59	74.627	Ictalurus_punctatus
ENSPSIG00000011959	-	86	87.179	ENSSTOG00000029847	BCL2L2-PABPN1	66	87.179	Ictidomys_tridecemlineatus
ENSPSIG00000011959	-	86	87.179	ENSJJAG00000023507	Gm20521	66	87.179	Jaculus_jaculus
ENSPSIG00000011959	-	94	77.444	ENSLBEG00000027266	pabpn1	58	76.866	Labrus_bergylta
ENSPSIG00000011959	-	84	85.217	ENSLACG00000000646	pabpn1	50	85.965	Latimeria_chalumnae
ENSPSIG00000011959	-	83	68.421	ENSLOCG00000004694	pabpn1l	52	69.369	Lepisosteus_oculatus
ENSPSIG00000011959	-	83	88.596	ENSLAFG00000031227	-	75	88.596	Loxodonta_africana
ENSPSIG00000011959	-	73	86.139	ENSMFAG00000031355	-	71	86.139	Macaca_fascicularis
ENSPSIG00000011959	-	86	87.179	ENSMFAG00000032183	BCL2L2-PABPN1	66	87.179	Macaca_fascicularis
ENSPSIG00000011959	-	86	87.179	ENSMMUG00000014747	BCL2L2-PABPN1	77	86.607	Macaca_mulatta
ENSPSIG00000011959	-	80	82.569	ENSMNEG00000035750	-	71	86.139	Macaca_nemestrina
ENSPSIG00000011959	-	82	78.571	ENSMLEG00000034623	-	74	79.439	Mandrillus_leucophaeus
ENSPSIG00000011959	-	86	87.179	ENSMLEG00000043862	BCL2L2-PABPN1	66	87.179	Mandrillus_leucophaeus
ENSPSIG00000011959	-	86	88.034	ENSMOCG00000018557	Gm20521	66	90.826	Microtus_ochrogaster
ENSPSIG00000011959	-	94	77.444	ENSMMOG00000005405	pabpn1	58	76.866	Mola_mola
ENSPSIG00000011959	-	86	87.179	MGP_CAROLIEiJ_G0019277	Pabpn1	66	89.908	Mus_caroli
ENSPSIG00000011959	-	86	87.179	ENSMUSG00000022194	Pabpn1	70	87.179	Mus_musculus
ENSPSIG00000011959	-	86	87.179	MGP_PahariEiJ_G0030295	Pabpn1	81	100.000	Mus_pahari
ENSPSIG00000011959	-	86	87.179	MGP_SPRETEiJ_G0020166	Pabpn1	66	89.908	Mus_spretus
ENSPSIG00000011959	-	86	87.179	ENSMPUG00000006775	-	70	87.179	Mustela_putorius_furo
ENSPSIG00000011959	-	86	87.179	ENSMLUG00000003800	-	62	87.179	Myotis_lucifugus
ENSPSIG00000011959	-	91	81.301	ENSNBRG00000023955	pabpn1	76	77.612	Neolamprologus_brichardi
ENSPSIG00000011959	-	81	63.964	ENSNLEG00000035292	-	76	63.964	Nomascus_leucogenys
ENSPSIG00000011959	-	83	77.193	ENSODEG00000011555	-	61	77.193	Octodon_degus
ENSPSIG00000011959	-	82	86.607	ENSOANG00000009218	-	77	86.607	Ornithorhynchus_anatinus
ENSPSIG00000011959	-	94	77.444	ENSORLG00000027900	pabpn1	57	77.444	Oryzias_latipes
ENSPSIG00000011959	-	84	84.348	ENSORLG00015000018	pabpn1	58	76.866	Oryzias_latipes_hsok
ENSPSIG00000011959	-	95	76.866	ENSOMEG00000016618	pabpn1	50	76.866	Oryzias_melastigma
ENSPSIG00000011959	-	76	75.238	ENSPPAG00000039421	-	58	75.238	Pan_paniscus
ENSPSIG00000011959	-	86	87.179	ENSPPAG00000028984	BCL2L2-PABPN1	70	87.179	Pan_paniscus
ENSPSIG00000011959	-	86	87.179	ENSPTIG00000001063	BCL2L2-PABPN1	66	87.179	Panthera_tigris_altaica
ENSPSIG00000011959	-	80	82.727	ENSPANG00000023326	-	71	86.275	Papio_anubis
ENSPSIG00000011959	-	80	70.270	ENSPKIG00000008340	pabpn1l	55	70.270	Paramormyrops_kingsleyae
ENSPSIG00000011959	-	83	90.351	ENSPEMG00000008332	Gm20521	66	90.826	Peromyscus_maniculatus_bairdii
ENSPSIG00000011959	-	75	81.553	ENSPMAG00000006212	pabpn1	51	77.236	Petromyzon_marinus
ENSPSIG00000011959	-	78	85.047	ENSPFOG00000010351	pabpn1	58	75.000	Poecilia_formosa
ENSPSIG00000011959	-	78	85.047	ENSPMEG00000020856	pabpn1	58	75.000	Poecilia_mexicana
ENSPSIG00000011959	-	78	85.047	ENSPREG00000011278	pabpn1	58	75.000	Poecilia_reticulata
ENSPSIG00000011959	-	91	81.301	ENSPNYG00000013182	pabpn1	58	77.612	Pundamilia_nyererei
ENSPSIG00000011959	-	95	76.866	ENSPNAG00000023526	pabpn1	58	76.866	Pygocentrus_nattereri
ENSPSIG00000011959	-	71	73.469	ENSPNAG00000021666	pabpn1l	55	72.973	Pygocentrus_nattereri
ENSPSIG00000011959	-	86	87.179	ENSRROG00000045535	BCL2L2-PABPN1	66	87.179	Rhinopithecus_roxellana
ENSPSIG00000011959	-	86	87.179	ENSSBOG00000026930	BCL2L2-PABPN1	70	87.179	Saimiri_boliviensis_boliviensis
ENSPSIG00000011959	-	86	86.325	ENSSHAG00000014841	-	54	86.325	Sarcophilus_harrisii
ENSPSIG00000011959	-	87	71.429	ENSSHAG00000007707	-	50	71.429	Sarcophilus_harrisii
ENSPSIG00000011959	-	71	72.449	ENSSFOG00015015833	pabpn1l	52	70.270	Scleropages_formosus
ENSPSIG00000011959	-	84	83.478	ENSSFOG00015014718	pabpn1	58	76.119	Scleropages_formosus
ENSPSIG00000011959	-	94	76.692	ENSSFOG00015012565	pabpn1	60	76.866	Scleropages_formosus
ENSPSIG00000011959	-	94	77.444	ENSSMAG00000020157	pabpn1	58	76.866	Scophthalmus_maximus
ENSPSIG00000011959	-	84	84.348	ENSSLDG00000007118	pabpn1	58	76.866	Seriola_lalandi_dorsalis
ENSPSIG00000011959	-	86	91.453	ENSSPUG00000018308	-	66	91.453	Sphenodon_punctatus
ENSPSIG00000011959	-	55	64.103	ENSSSCG00000038472	-	55	64.103	Sus_scrofa
ENSPSIG00000011959	-	94	78.195	ENSTRUG00000023664	pabpn1	57	78.195	Takifugu_rubripes
ENSPSIG00000011959	-	95	77.612	ENSTNIG00000005369	pabpn1	62	77.612	Tetraodon_nigroviridis
ENSPSIG00000011959	-	77	85.849	ENSXCOG00000005158	pabpn1	79	75.556	Xiphophorus_couchianus
ENSPSIG00000011959	-	78	85.047	ENSXMAG00000006196	pabpn1	58	75.000	Xiphophorus_maculatus