EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012112 (Gene tree)
Gene ID: 102454941
Gene Symbol: GFI1B
Alias: -
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 22362 bases
Position: chrJH212693.1:900488-922849
Accession: 102454941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013478	zf-C2H2	PF00096.26	7.2e-29	1	5
ENSPSIP00000013478	zf-C2H2	PF00096.26	7.2e-29	2	5
ENSPSIP00000013478	zf-C2H2	PF00096.26	7.2e-29	3	5
ENSPSIP00000013478	zf-C2H2	PF00096.26	7.2e-29	4	5
ENSPSIP00000013478	zf-C2H2	PF00096.26	7.2e-29	5	5
ENSPSIP00000013478	zf-met	PF12874.7	5.1e-08	1	2
ENSPSIP00000013478	zf-met	PF12874.7	5.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013542	GFI1B-201	3010	XM_006136830	ENSPSIP00000013478	342 (aa)	XP_006136892	K7FZL8

Gene Model

Click here to download ENSPSIG00000012112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012112	GFI1B	50	38.983	ENSPSIG00000005522	ZNF646	99	36.232
ENSPSIG00000012112	GFI1B	53	44.118	ENSPSIG00000010328	-	68	44.118
ENSPSIG00000012112	GFI1B	77	42.553	ENSPSIG00000009270	-	83	42.553
ENSPSIG00000012112	GFI1B	61	34.302	ENSPSIG00000006944	PRDM15	51	34.302
ENSPSIG00000012112	GFI1B	51	44.785	ENSPSIG00000015459	-	69	44.785
ENSPSIG00000012112	GFI1B	58	46.729	ENSPSIG00000010405	-	99	46.729
ENSPSIG00000012112	GFI1B	73	46.957	ENSPSIG00000009893	-	64	46.957
ENSPSIG00000012112	GFI1B	56	46.575	ENSPSIG00000009603	-	99	46.575
ENSPSIG00000012112	GFI1B	72	46.358	ENSPSIG00000004614	-	88	46.358
ENSPSIG00000012112	GFI1B	51	38.182	ENSPSIG00000004682	ZNF652	63	38.272
ENSPSIG00000012112	GFI1B	53	44.545	ENSPSIG00000003152	-	79	44.545
ENSPSIG00000012112	GFI1B	55	38.095	ENSPSIG00000002538	ZNF521	56	38.095
ENSPSIG00000012112	GFI1B	53	44.444	ENSPSIG00000005603	-	65	44.444
ENSPSIG00000012112	GFI1B	66	45.652	ENSPSIG00000015216	-	82	45.652
ENSPSIG00000012112	GFI1B	61	32.335	ENSPSIG00000011562	-	83	37.879
ENSPSIG00000012112	GFI1B	59	47.015	ENSPSIG00000000760	-	91	47.015
ENSPSIG00000012112	GFI1B	79	44.295	ENSPSIG00000016380	-	79	44.295
ENSPSIG00000012112	GFI1B	90	61.165	ENSPSIG00000008734	GFI1	82	60.518
ENSPSIG00000012112	GFI1B	51	44.805	ENSPSIG00000000522	-	73	44.805
ENSPSIG00000012112	GFI1B	51	37.190	ENSPSIG00000004262	SNAI3	56	37.190
ENSPSIG00000012112	GFI1B	53	41.615	ENSPSIG00000004303	ZNF319	95	41.615
ENSPSIG00000012112	GFI1B	53	43.262	ENSPSIG00000012650	-	70	43.262
ENSPSIG00000012112	GFI1B	56	45.342	ENSPSIG00000004502	-	52	45.342
ENSPSIG00000012112	GFI1B	58	44.118	ENSPSIG00000000943	ZNF770	64	44.118
ENSPSIG00000012112	GFI1B	51	51.000	ENSPSIG00000000672	-	84	51.000
ENSPSIG00000012112	GFI1B	59	44.444	ENSPSIG00000005128	-	100	44.444
ENSPSIG00000012112	GFI1B	59	39.665	ENSPSIG00000006586	-	99	39.665
ENSPSIG00000012112	GFI1B	53	44.037	ENSPSIG00000008588	-	100	44.037
ENSPSIG00000012112	GFI1B	68	37.226	ENSPSIG00000003607	SNAI1	54	37.226
ENSPSIG00000012112	GFI1B	52	42.941	ENSPSIG00000004647	-	51	42.941
ENSPSIG00000012112	GFI1B	57	39.506	ENSPSIG00000013505	PRDM5	74	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012112	GFI1B	100	59.259	ENSAPOG00000001296	gfi1b	100	59.259	Acanthochromis_polyacanthus
ENSPSIG00000012112	GFI1B	65	73.778	ENSACIG00000002190	gfi1b	74	73.778	Amphilophus_citrinellus
ENSPSIG00000012112	GFI1B	100	59.599	ENSAOCG00000021187	gfi1b	100	59.599	Amphiprion_ocellaris
ENSPSIG00000012112	GFI1B	100	59.770	ENSAPEG00000016196	gfi1b	100	59.770	Amphiprion_percula
ENSPSIG00000012112	GFI1B	100	60.465	ENSATEG00000002534	gfi1b	100	60.465	Anabas_testudineus
ENSPSIG00000012112	GFI1B	100	78.947	ENSAPLG00000003373	GFI1B	100	78.947	Anas_platyrhynchos
ENSPSIG00000012112	GFI1B	100	55.807	ENSACLG00000027053	gfi1b	100	55.807	Astatotilapia_calliptera
ENSPSIG00000012112	GFI1B	100	60.857	ENSAMXG00000037544	GFI1B	100	60.857	Astyanax_mexicanus
ENSPSIG00000012112	GFI1B	100	68.876	ENSCAPG00000010404	GFI1B	100	68.876	Cavia_aperea
ENSPSIG00000012112	GFI1B	100	93.567	ENSCPBG00000021186	GFI1B	100	93.567	Chrysemys_picta_bellii
ENSPSIG00000012112	GFI1B	100	58.501	ENSCSEG00000001315	gfi1b	100	58.501	Cynoglossus_semilaevis
ENSPSIG00000012112	GFI1B	100	57.849	ENSCVAG00000017168	gfi1b	100	57.849	Cyprinodon_variegatus
ENSPSIG00000012112	GFI1B	100	61.299	ENSDARG00000079947	gfi1b	97	79.741	Danio_rerio
ENSPSIG00000012112	GFI1B	66	58.850	ENSEEUG00000012609	-	100	58.850	Erinaceus_europaeus
ENSPSIG00000012112	GFI1B	100	61.383	ENSELUG00000016933	gfi1b	100	61.383	Esox_lucius
ENSPSIG00000012112	GFI1B	100	72.703	ENSFALG00000001479	GFI1B	100	72.703	Ficedula_albicollis
ENSPSIG00000012112	GFI1B	100	58.239	ENSFHEG00000015138	gfi1b	100	58.239	Fundulus_heteroclitus
ENSPSIG00000012112	GFI1B	67	77.253	ENSGMOG00000019123	gfi1b	87	77.253	Gadus_morhua
ENSPSIG00000012112	GFI1B	100	79.360	ENSGALG00000003478	GFI1B	100	79.360	Gallus_gallus
ENSPSIG00000012112	GFI1B	67	75.862	ENSGAFG00000003059	gfi1b	98	75.862	Gambusia_affinis
ENSPSIG00000012112	GFI1B	100	59.375	ENSGACG00000018134	gfi1b	100	59.375	Gasterosteus_aculeatus
ENSPSIG00000012112	GFI1B	100	90.351	ENSGAGG00000021327	GFI1B	100	90.351	Gopherus_agassizii
ENSPSIG00000012112	GFI1B	100	55.807	ENSHBUG00000005451	gfi1b	100	55.807	Haplochromis_burtoni
ENSPSIG00000012112	GFI1B	100	57.143	ENSHCOG00000013713	gfi1b	100	57.429	Hippocampus_comes
ENSPSIG00000012112	GFI1B	100	60.458	ENSIPUG00000012769	gfi1b	100	60.458	Ictalurus_punctatus
ENSPSIG00000012112	GFI1B	99	65.092	ENSJJAG00000016355	Gfi1b	100	65.092	Jaculus_jaculus
ENSPSIG00000012112	GFI1B	100	57.925	ENSKMAG00000016047	gfi1b	100	57.925	Kryptolebias_marmoratus
ENSPSIG00000012112	GFI1B	100	60.114	ENSLBEG00000020297	gfi1b	99	60.511	Labrus_bergylta
ENSPSIG00000012112	GFI1B	100	65.903	ENSLACG00000012207	GFI1B	100	65.903	Latimeria_chalumnae
ENSPSIG00000012112	GFI1B	100	61.337	ENSLOCG00000005750	gfi1b	100	61.337	Lepisosteus_oculatus
ENSPSIG00000012112	GFI1B	100	71.098	ENSLAFG00000022367	GFI1B	100	71.387	Loxodonta_africana
ENSPSIG00000012112	GFI1B	100	59.884	ENSMAMG00000003040	gfi1b	100	59.884	Mastacembelus_armatus
ENSPSIG00000012112	GFI1B	99	55.966	ENSMZEG00005015594	gfi1b	99	55.966	Maylandia_zebra
ENSPSIG00000012112	GFI1B	100	79.360	ENSMGAG00000006129	GFI1B	100	79.360	Meleagris_gallopavo
ENSPSIG00000012112	GFI1B	100	61.095	ENSMMOG00000011764	gfi1b	100	61.095	Mola_mola
ENSPSIG00000012112	GFI1B	100	64.191	ENSMODG00000012600	GFI1B	100	64.191	Monodelphis_domestica
ENSPSIG00000012112	GFI1B	100	57.714	ENSMALG00000004034	gfi1b	100	57.714	Monopterus_albus
ENSPSIG00000012112	GFI1B	99	69.971	ENSNGAG00000003333	Gfi1b	100	69.971	Nannospalax_galili
ENSPSIG00000012112	GFI1B	100	54.958	ENSNBRG00000012391	gfi1b	100	54.958	Neolamprologus_brichardi
ENSPSIG00000012112	GFI1B	100	54.958	ENSONIG00000013011	gfi1b	100	83.799	Oreochromis_niloticus
ENSPSIG00000012112	GFI1B	100	71.345	ENSOANG00000014723	GFI1B	100	71.345	Ornithorhynchus_anatinus
ENSPSIG00000012112	GFI1B	100	46.686	ENSORLG00000014390	GFI1B	96	51.351	Oryzias_latipes
ENSPSIG00000012112	GFI1B	100	58.333	ENSORLG00020003719	GFI1B	100	58.333	Oryzias_latipes_hni
ENSPSIG00000012112	GFI1B	100	58.046	ENSORLG00015017142	gfi1b	100	58.046	Oryzias_latipes_hsok
ENSPSIG00000012112	GFI1B	100	56.395	ENSOMEG00000015149	GFI1B	100	54.722	Oryzias_melastigma
ENSPSIG00000012112	GFI1B	100	68.300	ENSOGAG00000008879	GFI1B	100	68.588	Otolemur_garnettii
ENSPSIG00000012112	GFI1B	100	62.396	ENSPKIG00000007643	gfi1b	100	62.396	Paramormyrops_kingsleyae
ENSPSIG00000012112	GFI1B	67	74.262	ENSPMGG00000006021	gfi1b	75	75.105	Periophthalmus_magnuspinnatus
ENSPSIG00000012112	GFI1B	100	64.987	ENSPCIG00000019724	GFI1B	100	64.987	Phascolarctos_cinereus
ENSPSIG00000012112	GFI1B	100	58.333	ENSPFOG00000003460	gfi1b	100	58.333	Poecilia_formosa
ENSPSIG00000012112	GFI1B	100	59.827	ENSPLAG00000021960	GFI1B	100	59.827	Poecilia_latipinna
ENSPSIG00000012112	GFI1B	100	58.841	ENSPLAG00000017181	GFI1B	100	58.841	Poecilia_latipinna
ENSPSIG00000012112	GFI1B	100	57.835	ENSPMEG00000001556	GFI1B	100	57.835	Poecilia_mexicana
ENSPSIG00000012112	GFI1B	100	57.835	ENSPMEG00000019220	gfi1b	100	57.835	Poecilia_mexicana
ENSPSIG00000012112	GFI1B	100	57.514	ENSPREG00000021718	gfi1b	100	57.514	Poecilia_reticulata
ENSPSIG00000012112	GFI1B	78	64.875	ENSPNYG00000018422	gfi1b	87	64.875	Pundamilia_nyererei
ENSPSIG00000012112	GFI1B	100	61.017	ENSPNAG00000021118	gfi1b	100	61.017	Pygocentrus_nattereri
ENSPSIG00000012112	GFI1B	100	57.895	ENSSHAG00000006462	GFI1B	100	57.895	Sarcophilus_harrisii
ENSPSIG00000012112	GFI1B	51	72.159	ENSSFOG00015011566	gfi1b	90	54.762	Scleropages_formosus
ENSPSIG00000012112	GFI1B	99	60.465	ENSSMAG00000015181	gfi1b	99	60.465	Scophthalmus_maximus
ENSPSIG00000012112	GFI1B	100	59.593	ENSSDUG00000011604	gfi1b	100	59.593	Seriola_dumerili
ENSPSIG00000012112	GFI1B	100	58.857	ENSSLDG00000013823	gfi1b	100	58.857	Seriola_lalandi_dorsalis
ENSPSIG00000012112	GFI1B	100	68.497	ENSSPUG00000016039	GFI1B	100	68.497	Sphenodon_punctatus
ENSPSIG00000012112	GFI1B	100	57.386	ENSSPAG00000022914	gfi1b	100	57.386	Stegastes_partitus
ENSPSIG00000012112	GFI1B	56	67.358	ENSTGUG00000015953	-	98	67.358	Taeniopygia_guttata
ENSPSIG00000012112	GFI1B	50	99.123	ENSTGUG00000005282	-	100	99.123	Taeniopygia_guttata
ENSPSIG00000012112	GFI1B	100	57.584	ENSTRUG00000004525	gfi1b	100	57.584	Takifugu_rubripes
ENSPSIG00000012112	GFI1B	100	58.213	ENSTNIG00000003834	gfi1b	100	58.213	Tetraodon_nigroviridis
ENSPSIG00000012112	GFI1B	100	55.491	ENSTBEG00000014459	GFI1B	100	55.491	Tupaia_belangeri
ENSPSIG00000012112	GFI1B	100	61.429	ENSXETG00000006263	gfi1b	100	62.139	Xenopus_tropicalis
ENSPSIG00000012112	GFI1B	100	58.689	ENSXMAG00000027589	gfi1b	100	58.689	Xiphophorus_maculatus