EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012150 (Gene tree)
Gene ID: 102457515
Gene Symbol: MTREX
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 96234 bases
Position: chrJH224682.1:8943120-9039353
Accession: 102457515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013993	rRNA_proc-arch	PF13234.6	2.2e-87	1	1
ENSPSIP00000013982	rRNA_proc-arch	PF13234.6	2.2e-87	1	1
ENSPSIP00000013982	DEAD	PF00270.29	1.2e-16	1	1
ENSPSIP00000013993	DEAD	PF00270.29	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014047	MTREX-201	3134	-	ENSPSIP00000013982	1035 (aa)	-	K7G122
ENSPSIT00000014058	MTREX-202	3099	XM_006139550	ENSPSIP00000013993	1032 (aa)	XP_006139612	K7G133

Gene Model

Click here to download ENSPSIG00000012150's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012150	MTREX	100	91.946	ENSG00000039123	MTREX	100	91.946	Homo_sapiens
ENSPSIG00000012150	MTREX	100	83.877	ENSAPOG00000007814	mtrex	100	83.445	Acanthochromis_polyacanthus
ENSPSIG00000012150	MTREX	100	92.433	ENSAMEG00000013856	MTREX	100	92.050	Ailuropoda_melanoleuca
ENSPSIG00000012150	MTREX	100	83.301	ENSACIG00000015117	mtrex	100	83.205	Amphilophus_citrinellus
ENSPSIG00000012150	MTREX	100	84.453	ENSAOCG00000011884	mtrex	100	83.732	Amphiprion_ocellaris
ENSPSIG00000012150	MTREX	100	84.069	ENSAPEG00000019384	mtrex	100	83.636	Amphiprion_percula
ENSPSIG00000012150	MTREX	100	84.423	ENSATEG00000015117	mtrex	100	84.312	Anabas_testudineus
ENSPSIG00000012150	MTREX	95	95.117	ENSAPLG00000009694	MTREX	99	95.117	Anas_platyrhynchos
ENSPSIG00000012150	MTREX	100	93.173	ENSACAG00000015200	MTREX	96	92.905	Anolis_carolinensis
ENSPSIG00000012150	MTREX	100	92.042	ENSANAG00000023095	MTREX	98	94.082	Aotus_nancymaae
ENSPSIG00000012150	MTREX	100	83.766	ENSACLG00000001921	mtrex	100	82.464	Astatotilapia_calliptera
ENSPSIG00000012150	MTREX	95	84.701	ENSAMXG00000018751	mtrex	99	84.701	Astyanax_mexicanus
ENSPSIG00000012150	MTREX	100	92.315	ENSBTAG00000010518	MTREX	100	91.739	Bos_taurus
ENSPSIG00000012150	MTREX	92	54.259	WBGene00012342	mtr-4	96	52.983	Caenorhabditis_elegans
ENSPSIG00000012150	MTREX	100	91.325	ENSCJAG00000001773	MTREX	100	91.325	Callithrix_jacchus
ENSPSIG00000012150	MTREX	100	92.426	ENSCAFG00000006818	MTREX	100	92.426	Canis_familiaris
ENSPSIG00000012150	MTREX	100	92.426	ENSCAFG00020024352	MTREX	100	92.426	Canis_lupus_dingo
ENSPSIG00000012150	MTREX	100	92.138	ENSCHIG00000024413	MTREX	100	91.467	Capra_hircus
ENSPSIG00000012150	MTREX	93	94.075	ENSTSYG00000007389	MTREX	100	94.075	Carlito_syrichta
ENSPSIG00000012150	MTREX	97	69.269	ENSCAPG00000008696	MTREX	99	69.238	Cavia_aperea
ENSPSIG00000012150	MTREX	100	92.138	ENSCPOG00000009797	MTREX	100	91.659	Cavia_porcellus
ENSPSIG00000012150	MTREX	100	92.042	ENSCCAG00000014177	MTREX	100	92.042	Cebus_capucinus
ENSPSIG00000012150	MTREX	100	92.234	ENSCATG00000042153	MTREX	100	91.850	Cercocebus_atys
ENSPSIG00000012150	MTREX	100	92.234	ENSCLAG00000006622	MTREX	100	91.755	Chinchilla_lanigera
ENSPSIG00000012150	MTREX	100	88.050	ENSCSAG00000016445	MTREX	100	87.667	Chlorocebus_sabaeus
ENSPSIG00000012150	MTREX	69	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSPSIG00000012150	MTREX	100	98.743	ENSCPBG00000026551	MTREX	94	98.743	Chrysemys_picta_bellii
ENSPSIG00000012150	MTREX	99	66.762	ENSCING00000003239	-	99	66.889	Ciona_intestinalis
ENSPSIG00000012150	MTREX	99	66.475	ENSCSAVG00000009304	-	100	70.430	Ciona_savignyi
ENSPSIG00000012150	MTREX	100	92.138	ENSCANG00000035770	MTREX	100	91.850	Colobus_angolensis_palliatus
ENSPSIG00000012150	MTREX	100	92.138	ENSCGRG00001024680	Mtrex	100	92.131	Cricetulus_griseus_chok1gshd
ENSPSIG00000012150	MTREX	100	92.138	ENSCGRG00000000307	Mtrex	100	92.131	Cricetulus_griseus_crigri
ENSPSIG00000012150	MTREX	100	82.885	ENSCSEG00000018621	mtrex	98	82.471	Cynoglossus_semilaevis
ENSPSIG00000012150	MTREX	100	84.216	ENSCVAG00000004556	mtrex	100	84.200	Cyprinodon_variegatus
ENSPSIG00000012150	MTREX	100	85.962	ENSDARG00000013457	mtrex	100	85.549	Danio_rerio
ENSPSIG00000012150	MTREX	100	91.882	ENSDNOG00000015375	MTREX	100	91.500	Dasypus_novemcinctus
ENSPSIG00000012150	MTREX	100	91.946	ENSDORG00000006782	Mtrex	100	91.946	Dipodomys_ordii
ENSPSIG00000012150	MTREX	99	63.214	FBgn0001986	Mtr4	91	66.149	Drosophila_melanogaster
ENSPSIG00000012150	MTREX	85	91.870	ENSETEG00000000727	MTREX	90	75.758	Echinops_telfairi
ENSPSIG00000012150	MTREX	99	75.338	ENSEBUG00000012869	mtrex	99	75.097	Eptatretus_burgeri
ENSPSIG00000012150	MTREX	100	92.234	ENSEASG00005013270	MTREX	100	92.234	Equus_asinus_asinus
ENSPSIG00000012150	MTREX	100	92.330	ENSECAG00000023723	MTREX	100	96.296	Equus_caballus
ENSPSIG00000012150	MTREX	98	84.226	ENSEEUG00000000527	MTREX	100	83.707	Erinaceus_europaeus
ENSPSIG00000012150	MTREX	98	86.187	ENSELUG00000004898	mtrex	100	90.126	Esox_lucius
ENSPSIG00000012150	MTREX	100	92.330	ENSFCAG00000010575	MTREX	100	92.138	Felis_catus
ENSPSIG00000012150	MTREX	100	92.300	ENSFALG00000010850	MTREX	100	92.271	Ficedula_albicollis
ENSPSIG00000012150	MTREX	100	91.931	ENSFDAG00000011199	MTREX	100	91.162	Fukomys_damarensis
ENSPSIG00000012150	MTREX	100	84.150	ENSFHEG00000023014	mtrex	100	83.237	Fundulus_heteroclitus
ENSPSIG00000012150	MTREX	100	81.328	ENSGMOG00000014702	mtrex	100	81.268	Gadus_morhua
ENSPSIG00000012150	MTREX	100	94.288	ENSGALG00000014709	MTREX	86	94.015	Gallus_gallus
ENSPSIG00000012150	MTREX	100	84.615	ENSGAFG00000012425	mtrex	100	84.712	Gambusia_affinis
ENSPSIG00000012150	MTREX	100	79.827	ENSGACG00000016260	mtrex	96	85.543	Gasterosteus_aculeatus
ENSPSIG00000012150	MTREX	100	97.582	ENSGAGG00000020036	MTREX	100	97.582	Gopherus_agassizii
ENSPSIG00000012150	MTREX	100	91.946	ENSGGOG00000001867	MTREX	100	91.946	Gorilla_gorilla
ENSPSIG00000012150	MTREX	100	83.766	ENSHBUG00000006229	mtrex	100	82.464	Haplochromis_burtoni
ENSPSIG00000012150	MTREX	100	92.123	ENSHGLG00000019445	SKIV2L2	100	92.123	Heterocephalus_glaber_female
ENSPSIG00000012150	MTREX	100	92.123	ENSHGLG00100011833	SKIV2L2	100	92.123	Heterocephalus_glaber_male
ENSPSIG00000012150	MTREX	92	84.521	ENSHCOG00000019995	mtrex	100	84.521	Hippocampus_comes
ENSPSIG00000012150	MTREX	100	86.320	ENSIPUG00000024348	skiv2l2	100	86.224	Ictalurus_punctatus
ENSPSIG00000012150	MTREX	100	91.946	ENSSTOG00000010802	MTREX	100	91.651	Ictidomys_tridecemlineatus
ENSPSIG00000012150	MTREX	100	86.994	ENSJJAG00000020975	Mtrex	100	86.390	Jaculus_jaculus
ENSPSIG00000012150	MTREX	100	83.317	ENSKMAG00000012642	mtrex	100	83.043	Kryptolebias_marmoratus
ENSPSIG00000012150	MTREX	100	83.958	ENSLBEG00000019367	mtrex	99	86.236	Labrus_bergylta
ENSPSIG00000012150	MTREX	100	90.426	ENSLACG00000009075	MTREX	100	89.652	Latimeria_chalumnae
ENSPSIG00000012150	MTREX	100	88.309	ENSLOCG00000010186	mtrex	100	87.826	Lepisosteus_oculatus
ENSPSIG00000012150	MTREX	99	89.837	ENSLAFG00000010497	MTREX	100	89.112	Loxodonta_africana
ENSPSIG00000012150	MTREX	100	92.234	ENSMFAG00000031610	MTREX	100	91.850	Macaca_fascicularis
ENSPSIG00000012150	MTREX	100	91.092	ENSMMUG00000010379	MTREX	100	91.092	Macaca_mulatta
ENSPSIG00000012150	MTREX	100	92.234	ENSMNEG00000032746	MTREX	100	91.850	Macaca_nemestrina
ENSPSIG00000012150	MTREX	100	92.234	ENSMLEG00000041051	MTREX	100	91.850	Mandrillus_leucophaeus
ENSPSIG00000012150	MTREX	100	83.607	ENSMAMG00000016753	mtrex	97	86.727	Mastacembelus_armatus
ENSPSIG00000012150	MTREX	100	83.766	ENSMZEG00005000414	mtrex	100	82.464	Maylandia_zebra
ENSPSIG00000012150	MTREX	95	68.997	ENSMGAG00000003980	MTREX	99	68.997	Meleagris_gallopavo
ENSPSIG00000012150	MTREX	100	92.322	ENSMAUG00000010727	Mtrex	100	92.226	Mesocricetus_auratus
ENSPSIG00000012150	MTREX	100	92.330	ENSMICG00000012779	MTREX	100	92.330	Microcebus_murinus
ENSPSIG00000012150	MTREX	100	91.977	ENSMOCG00000019886	Mtrex	100	90.744	Microtus_ochrogaster
ENSPSIG00000012150	MTREX	100	82.370	ENSMMOG00000002476	mtrex	100	82.370	Mola_mola
ENSPSIG00000012150	MTREX	100	92.843	ENSMODG00000019494	MTREX	100	93.133	Monodelphis_domestica
ENSPSIG00000012150	MTREX	100	74.758	ENSMALG00000002917	mtrex	99	82.600	Monopterus_albus
ENSPSIG00000012150	MTREX	100	92.315	MGP_CAROLIEiJ_G0018896	Mtrex	100	91.739	Mus_caroli
ENSPSIG00000012150	MTREX	100	92.507	ENSMUSG00000016018	Mtrex	100	90.840	Mus_musculus
ENSPSIG00000012150	MTREX	100	92.027	MGP_PahariEiJ_G0015967	Mtrex	100	90.363	Mus_pahari
ENSPSIG00000012150	MTREX	100	92.507	MGP_SPRETEiJ_G0019775	Mtrex	100	90.840	Mus_spretus
ENSPSIG00000012150	MTREX	100	92.234	ENSMPUG00000007619	MTREX	100	92.234	Mustela_putorius_furo
ENSPSIG00000012150	MTREX	100	91.667	ENSMLUG00000001152	MTREX	100	91.667	Myotis_lucifugus
ENSPSIG00000012150	MTREX	100	92.426	ENSNGAG00000011938	Mtrex	100	91.031	Nannospalax_galili
ENSPSIG00000012150	MTREX	100	83.862	ENSNBRG00000011293	mtrex	100	82.559	Neolamprologus_brichardi
ENSPSIG00000012150	MTREX	100	87.847	ENSNLEG00000001494	MTREX	100	87.847	Nomascus_leucogenys
ENSPSIG00000012150	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSPSIG00000012150	MTREX	95	86.105	ENSOPRG00000008009	MTREX	100	77.714	Ochotona_princeps
ENSPSIG00000012150	MTREX	100	91.467	ENSODEG00000017234	MTREX	100	90.892	Octodon_degus
ENSPSIG00000012150	MTREX	100	83.766	ENSONIG00000007587	mtrex	100	82.464	Oreochromis_niloticus
ENSPSIG00000012150	MTREX	50	94.141	ENSOANG00000004885	-	99	94.141	Ornithorhynchus_anatinus
ENSPSIG00000012150	MTREX	100	92.123	ENSOCUG00000004463	MTREX	100	92.123	Oryctolagus_cuniculus
ENSPSIG00000012150	MTREX	100	83.238	ENSORLG00000005443	mtrex	100	83.269	Oryzias_latipes
ENSPSIG00000012150	MTREX	100	83.142	ENSORLG00020006329	mtrex	100	83.173	Oryzias_latipes_hni
ENSPSIG00000012150	MTREX	100	83.142	ENSORLG00015012924	mtrex	100	83.173	Oryzias_latipes_hsok
ENSPSIG00000012150	MTREX	100	82.838	ENSOMEG00000008825	mtrex	100	82.742	Oryzias_melastigma
ENSPSIG00000012150	MTREX	100	91.946	ENSOGAG00000002886	MTREX	100	91.126	Otolemur_garnettii
ENSPSIG00000012150	MTREX	100	91.874	ENSOARG00000007764	MTREX	100	91.205	Ovis_aries
ENSPSIG00000012150	MTREX	100	91.850	ENSPPAG00000039291	MTREX	100	91.850	Pan_paniscus
ENSPSIG00000012150	MTREX	100	92.330	ENSPPRG00000019701	MTREX	100	92.138	Panthera_pardus
ENSPSIG00000012150	MTREX	100	90.796	ENSPTIG00000009313	MTREX	100	90.604	Panthera_tigris_altaica
ENSPSIG00000012150	MTREX	100	91.850	ENSPTRG00000016878	MTREX	100	91.850	Pan_troglodytes
ENSPSIG00000012150	MTREX	100	92.138	ENSPANG00000009697	MTREX	100	91.755	Papio_anubis
ENSPSIG00000012150	MTREX	100	87.572	ENSPKIG00000020833	mtrex	100	86.994	Paramormyrops_kingsleyae
ENSPSIG00000012150	MTREX	100	82.002	ENSPMGG00000002582	mtrex	100	81.906	Periophthalmus_magnuspinnatus
ENSPSIG00000012150	MTREX	95	66.126	ENSPMAG00000009668	mtrex	100	65.822	Petromyzon_marinus
ENSPSIG00000012150	MTREX	92	96.093	ENSPCIG00000024730	MTREX	100	96.093	Phascolarctos_cinereus
ENSPSIG00000012150	MTREX	76	87.833	ENSPFOG00000003141	mtrex	100	88.071	Poecilia_formosa
ENSPSIG00000012150	MTREX	100	84.165	ENSPLAG00000021311	mtrex	100	84.504	Poecilia_latipinna
ENSPSIG00000012150	MTREX	93	87.370	ENSPMEG00000010597	mtrex	99	87.683	Poecilia_mexicana
ENSPSIG00000012150	MTREX	100	83.877	ENSPREG00000003089	mtrex	100	84.216	Poecilia_reticulata
ENSPSIG00000012150	MTREX	98	91.813	ENSPPYG00000015469	MTREX	98	91.813	Pongo_abelii
ENSPSIG00000012150	MTREX	94	79.535	ENSPCAG00000013120	MTREX	94	79.535	Procavia_capensis
ENSPSIG00000012150	MTREX	99	86.526	ENSPCOG00000018092	MTREX	100	86.526	Propithecus_coquereli
ENSPSIG00000012150	MTREX	100	92.042	ENSPVAG00000002445	MTREX	100	92.042	Pteropus_vampyrus
ENSPSIG00000012150	MTREX	100	83.670	ENSPNYG00000006164	mtrex	100	82.370	Pundamilia_nyererei
ENSPSIG00000012150	MTREX	100	85.946	ENSPNAG00000008794	mtrex	100	86.224	Pygocentrus_nattereri
ENSPSIG00000012150	MTREX	99	91.094	ENSRNOG00000010125	Mtrex	97	90.338	Rattus_norvegicus
ENSPSIG00000012150	MTREX	100	90.508	ENSRBIG00000034930	MTREX	100	90.125	Rhinopithecus_bieti
ENSPSIG00000012150	MTREX	100	92.234	ENSRROG00000039895	MTREX	100	91.850	Rhinopithecus_roxellana
ENSPSIG00000012150	MTREX	90	55.824	YJL050W	MTR4	89	55.824	Saccharomyces_cerevisiae
ENSPSIG00000012150	MTREX	100	91.946	ENSSBOG00000026693	MTREX	98	94.082	Saimiri_boliviensis_boliviensis
ENSPSIG00000012150	MTREX	97	93.888	ENSSHAG00000004600	MTREX	99	93.882	Sarcophilus_harrisii
ENSPSIG00000012150	MTREX	100	88.042	ENSSFOG00015014355	skiv2l2	100	87.657	Scleropages_formosus
ENSPSIG00000012150	MTREX	100	83.846	ENSSMAG00000007572	mtrex	100	83.558	Scophthalmus_maximus
ENSPSIG00000012150	MTREX	100	84.261	ENSSDUG00000023789	mtrex	100	84.135	Seriola_dumerili
ENSPSIG00000012150	MTREX	100	84.165	ENSSLDG00000006301	mtrex	100	84.038	Seriola_lalandi_dorsalis
ENSPSIG00000012150	MTREX	100	90.595	ENSSARG00000008387	MTREX	100	90.595	Sorex_araneus
ENSPSIG00000012150	MTREX	100	82.478	ENSSPUG00000007071	MTREX	100	82.478	Sphenodon_punctatus
ENSPSIG00000012150	MTREX	100	82.160	ENSSPAG00000011319	mtrex	100	82.449	Stegastes_partitus
ENSPSIG00000012150	MTREX	100	92.234	ENSSSCG00000016911	MTREX	100	92.234	Sus_scrofa
ENSPSIG00000012150	MTREX	100	92.204	ENSTGUG00000002480	MTREX	100	91.602	Taeniopygia_guttata
ENSPSIG00000012150	MTREX	100	83.477	ENSTRUG00000014571	mtrex	100	83.381	Takifugu_rubripes
ENSPSIG00000012150	MTREX	100	76.318	ENSTBEG00000007769	MTREX	100	76.318	Tupaia_belangeri
ENSPSIG00000012150	MTREX	100	92.219	ENSTTRG00000008678	MTREX	100	91.547	Tursiops_truncatus
ENSPSIG00000012150	MTREX	100	91.946	ENSUAMG00000023061	MTREX	100	91.755	Ursus_americanus
ENSPSIG00000012150	MTREX	100	91.699	ENSUMAG00000009373	MTREX	99	97.126	Ursus_maritimus
ENSPSIG00000012150	MTREX	100	82.646	ENSVPAG00000011174	MTREX	100	81.975	Vicugna_pacos
ENSPSIG00000012150	MTREX	100	92.330	ENSVVUG00000021337	MTREX	100	92.330	Vulpes_vulpes
ENSPSIG00000012150	MTREX	100	90.329	ENSXETG00000032798	MTREX	100	89.555	Xenopus_tropicalis
ENSPSIG00000012150	MTREX	100	84.342	ENSXMAG00000004799	mtrex	100	84.246	Xiphophorus_maculatus