EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012172 (Gene tree)
Gene ID: 102444921
Gene Symbol: REXO5
Alias: -
Full Name: RNA exonuclease 5
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 31697 bases
Position: chrJH208871.1:205689-237385
Accession: 102444921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013553	RRM_1	PF00076.22	1.1e-18	1	2
ENSPSIP00000013553	RRM_1	PF00076.22	1.1e-18	2	2
ENSPSIP00000013553	RNase_T	PF00929.24	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013617	REXO5-201	2574	XM_006123130	ENSPSIP00000013553	786 (aa)	XP_006123192	K7FZU3

Gene Model

Click here to download ENSPSIG00000012172's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012172's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012172	REXO5	94	48.525	ENSG00000005189	REXO5	99	64.789	Homo_sapiens
ENSPSIG00000012172	REXO5	91	36.675	ENSAPOG00000008514	REXO5	92	36.675	Acanthochromis_polyacanthus
ENSPSIG00000012172	REXO5	94	48.871	ENSAMEG00000006178	REXO5	94	48.871	Ailuropoda_melanoleuca
ENSPSIG00000012172	REXO5	91	37.615	ENSAPEG00000010627	REXO5	93	36.662	Amphiprion_percula
ENSPSIG00000012172	REXO5	67	40.602	ENSATEG00000004682	REXO5	98	39.300	Anabas_testudineus
ENSPSIG00000012172	REXO5	94	67.388	ENSAPLG00000015740	REXO5	100	67.388	Anas_platyrhynchos
ENSPSIG00000012172	REXO5	99	53.384	ENSACAG00000009744	REXO5	99	53.384	Anolis_carolinensis
ENSPSIG00000012172	REXO5	94	46.381	ENSANAG00000034379	REXO5	94	46.381	Aotus_nancymaae
ENSPSIG00000012172	REXO5	77	34.195	ENSACLG00000004778	REXO5	99	34.195	Astatotilapia_calliptera
ENSPSIG00000012172	REXO5	94	48.005	ENSBTAG00000006449	REXO5	92	48.005	Bos_taurus
ENSPSIG00000012172	REXO5	94	45.889	ENSCJAG00000009363	REXO5	93	51.786	Callithrix_jacchus
ENSPSIG00000012172	REXO5	94	49.072	ENSCAFG00000017924	REXO5	99	49.270	Canis_familiaris
ENSPSIG00000012172	REXO5	94	47.613	ENSCAFG00020021846	REXO5	93	47.613	Canis_lupus_dingo
ENSPSIG00000012172	REXO5	94	49.535	ENSCHIG00000022443	REXO5	93	49.535	Capra_hircus
ENSPSIG00000012172	REXO5	98	44.144	ENSCPOG00000008940	REXO5	91	46.816	Cavia_porcellus
ENSPSIG00000012172	REXO5	94	47.523	ENSCCAG00000034936	REXO5	93	47.523	Cebus_capucinus
ENSPSIG00000012172	REXO5	94	48.448	ENSCATG00000044063	REXO5	94	48.448	Cercocebus_atys
ENSPSIG00000012172	REXO5	98	44.061	ENSCLAG00000008033	REXO5	93	44.061	Chinchilla_lanigera
ENSPSIG00000012172	REXO5	94	48.448	ENSCSAG00000007562	REXO5	94	48.448	Chlorocebus_sabaeus
ENSPSIG00000012172	REXO5	60	58.442	ENSCHOG00000009146	-	63	58.442	Choloepus_hoffmanni
ENSPSIG00000012172	REXO5	100	87.183	ENSCPBG00000019062	REXO5	100	87.183	Chrysemys_picta_bellii
ENSPSIG00000012172	REXO5	94	48.313	ENSCANG00000035776	REXO5	94	48.313	Colobus_angolensis_palliatus
ENSPSIG00000012172	REXO5	94	45.979	ENSCGRG00001016179	-	95	45.979	Cricetulus_griseus_chok1gshd
ENSPSIG00000012172	REXO5	94	45.979	ENSCGRG00000010868	-	91	52.817	Cricetulus_griseus_crigri
ENSPSIG00000012172	REXO5	94	47.844	ENSEASG00005007266	REXO5	98	51.724	Equus_asinus_asinus
ENSPSIG00000012172	REXO5	94	48.456	ENSECAG00000018769	REXO5	83	48.456	Equus_caballus
ENSPSIG00000012172	REXO5	83	55.652	ENSEEUG00000003572	REXO5	89	55.652	Erinaceus_europaeus
ENSPSIG00000012172	REXO5	94	48.079	ENSFCAG00000015160	REXO5	94	48.079	Felis_catus
ENSPSIG00000012172	REXO5	94	65.676	ENSFALG00000014026	REXO5	100	65.676	Ficedula_albicollis
ENSPSIG00000012172	REXO5	96	33.990	ENSFHEG00000013388	REXO5	97	33.990	Fundulus_heteroclitus
ENSPSIG00000012172	REXO5	94	66.216	ENSGALG00000002239	REXO5	95	66.216	Gallus_gallus
ENSPSIG00000012172	REXO5	95	32.841	ENSGAFG00000011045	REXO5	94	33.049	Gambusia_affinis
ENSPSIG00000012172	REXO5	100	86.058	ENSGAGG00000008242	REXO5	100	86.058	Gopherus_agassizii
ENSPSIG00000012172	REXO5	94	48.652	ENSGGOG00000004539	REXO5	93	48.652	Gorilla_gorilla
ENSPSIG00000012172	REXO5	91	33.894	ENSHBUG00000017976	REXO5	92	33.894	Haplochromis_burtoni
ENSPSIG00000012172	REXO5	86	44.023	ENSHGLG00000012652	REXO5	99	44.331	Heterocephalus_glaber_female
ENSPSIG00000012172	REXO5	94	43.775	ENSHGLG00100013255	REXO5	99	46.039	Heterocephalus_glaber_male
ENSPSIG00000012172	REXO5	63	40.000	ENSHCOG00000008648	REXO5	83	40.396	Hippocampus_comes
ENSPSIG00000012172	REXO5	78	48.808	ENSSTOG00000007071	REXO5	88	48.808	Ictidomys_tridecemlineatus
ENSPSIG00000012172	REXO5	94	45.946	ENSJJAG00000023821	-	94	45.946	Jaculus_jaculus
ENSPSIG00000012172	REXO5	92	34.531	ENSKMAG00000009488	REXO5	92	34.531	Kryptolebias_marmoratus
ENSPSIG00000012172	REXO5	91	34.510	ENSLBEG00000009276	REXO5	99	33.578	Labrus_bergylta
ENSPSIG00000012172	REXO5	77	47.352	ENSLACG00000001758	REXO5	99	47.352	Latimeria_chalumnae
ENSPSIG00000012172	REXO5	93	46.765	ENSLAFG00000006157	REXO5	94	46.765	Loxodonta_africana
ENSPSIG00000012172	REXO5	94	48.448	ENSMFAG00000036613	REXO5	94	48.448	Macaca_fascicularis
ENSPSIG00000012172	REXO5	94	48.583	ENSMMUG00000016748	REXO5	94	48.583	Macaca_mulatta
ENSPSIG00000012172	REXO5	94	48.448	ENSMNEG00000045028	REXO5	94	48.448	Macaca_nemestrina
ENSPSIG00000012172	REXO5	94	48.448	ENSMLEG00000029851	REXO5	94	48.448	Mandrillus_leucophaeus
ENSPSIG00000012172	REXO5	98	33.937	ENSMAMG00000006915	REXO5	95	33.816	Mastacembelus_armatus
ENSPSIG00000012172	REXO5	91	33.506	ENSMZEG00005013657	REXO5	92	33.506	Maylandia_zebra
ENSPSIG00000012172	REXO5	94	66.486	ENSMGAG00000010369	REXO5	100	66.486	Meleagris_gallopavo
ENSPSIG00000012172	REXO5	94	48.859	ENSMICG00000014886	REXO5	94	48.859	Microcebus_murinus
ENSPSIG00000012172	REXO5	58	48.156	ENSMOCG00000010062	-	98	48.156	Microtus_ochrogaster
ENSPSIG00000012172	REXO5	94	51.711	ENSMODG00000007059	REXO5	89	51.711	Monodelphis_domestica
ENSPSIG00000012172	REXO5	94	43.683	MGP_CAROLIEiJ_G0030385	-	94	43.683	Mus_caroli
ENSPSIG00000012172	REXO5	94	44.220	ENSMUSG00000030924	Rexo5	98	46.753	Mus_musculus
ENSPSIG00000012172	REXO5	94	43.817	MGP_SPRETEiJ_G0031499	-	94	43.817	Mus_spretus
ENSPSIG00000012172	REXO5	94	49.194	ENSMPUG00000013643	REXO5	93	49.194	Mustela_putorius_furo
ENSPSIG00000012172	REXO5	94	44.698	ENSNGAG00000002025	-	98	48.373	Nannospalax_galili
ENSPSIG00000012172	REXO5	58	44.957	ENSNBRG00000006877	REXO5	83	44.957	Neolamprologus_brichardi
ENSPSIG00000012172	REXO5	94	48.113	ENSNLEG00000012334	REXO5	93	48.113	Nomascus_leucogenys
ENSPSIG00000012172	REXO5	93	49.662	ENSMEUG00000015298	REXO5	99	49.662	Notamacropus_eugenii
ENSPSIG00000012172	REXO5	82	58.586	ENSOPRG00000011398	REXO5	82	58.586	Ochotona_princeps
ENSPSIG00000012172	REXO5	91	32.600	ENSONIG00000000148	REXO5	98	38.488	Oreochromis_niloticus
ENSPSIG00000012172	REXO5	93	49.401	ENSOANG00000014291	REXO5	100	49.401	Ornithorhynchus_anatinus
ENSPSIG00000012172	REXO5	95	47.797	ENSOCUG00000009913	REXO5	93	47.797	Oryctolagus_cuniculus
ENSPSIG00000012172	REXO5	91	34.896	ENSORLG00000009738	REXO5	93	34.896	Oryzias_latipes
ENSPSIG00000012172	REXO5	91	35.310	ENSORLG00020010270	REXO5	93	35.310	Oryzias_latipes_hni
ENSPSIG00000012172	REXO5	91	35.640	ENSORLG00015009678	REXO5	93	35.640	Oryzias_latipes_hsok
ENSPSIG00000012172	REXO5	91	36.724	ENSOMEG00000019491	REXO5	92	36.724	Oryzias_melastigma
ENSPSIG00000012172	REXO5	94	47.651	ENSOGAG00000011564	REXO5	94	47.651	Otolemur_garnettii
ENSPSIG00000012172	REXO5	94	49.137	ENSOARG00000013401	REXO5	94	48.868	Ovis_aries
ENSPSIG00000012172	REXO5	94	48.518	ENSPPAG00000035005	REXO5	93	48.518	Pan_paniscus
ENSPSIG00000012172	REXO5	94	46.711	ENSPPRG00000022345	REXO5	93	46.846	Panthera_pardus
ENSPSIG00000012172	REXO5	94	48.217	ENSPTIG00000012096	REXO5	94	48.477	Panthera_tigris_altaica
ENSPSIG00000012172	REXO5	94	48.518	ENSPTRG00000007851	REXO5	93	48.518	Pan_troglodytes
ENSPSIG00000012172	REXO5	94	48.448	ENSPANG00000006898	REXO5	94	48.448	Papio_anubis
ENSPSIG00000012172	REXO5	91	37.209	ENSPKIG00000014406	REXO5	94	37.209	Paramormyrops_kingsleyae
ENSPSIG00000012172	REXO5	87	60.471	ENSPCIG00000029238	-	95	52.549	Phascolarctos_cinereus
ENSPSIG00000012172	REXO5	97	32.688	ENSPFOG00000012767	REXO5	98	32.606	Poecilia_formosa
ENSPSIG00000012172	REXO5	97	32.688	ENSPLAG00000006408	REXO5	98	32.606	Poecilia_latipinna
ENSPSIG00000012172	REXO5	97	32.848	ENSPMEG00000007726	REXO5	98	32.767	Poecilia_mexicana
ENSPSIG00000012172	REXO5	97	33.818	ENSPREG00000000146	REXO5	98	33.697	Poecilia_reticulata
ENSPSIG00000012172	REXO5	94	48.113	ENSPPYG00000007163	REXO5	93	48.113	Pongo_abelii
ENSPSIG00000012172	REXO5	91	45.480	ENSPCAG00000006265	REXO5	99	45.480	Procavia_capensis
ENSPSIG00000012172	REXO5	94	48.322	ENSPCOG00000018775	REXO5	94	48.322	Propithecus_coquereli
ENSPSIG00000012172	REXO5	94	47.613	ENSPVAG00000003293	REXO5	99	47.613	Pteropus_vampyrus
ENSPSIG00000012172	REXO5	89	33.616	ENSPNYG00000006922	REXO5	91	33.616	Pundamilia_nyererei
ENSPSIG00000012172	REXO5	91	36.599	ENSPNAG00000018866	-	92	36.599	Pygocentrus_nattereri
ENSPSIG00000012172	REXO5	94	43.893	ENSRNOG00000014513	Rexo5	95	43.893	Rattus_norvegicus
ENSPSIG00000012172	REXO5	94	48.387	ENSRBIG00000035163	REXO5	83	48.387	Rhinopithecus_bieti
ENSPSIG00000012172	REXO5	94	48.387	ENSRROG00000034741	REXO5	94	48.387	Rhinopithecus_roxellana
ENSPSIG00000012172	REXO5	94	47.523	ENSSBOG00000029650	REXO5	95	47.565	Saimiri_boliviensis_boliviensis
ENSPSIG00000012172	REXO5	94	52.870	ENSSHAG00000005042	REXO5	94	52.870	Sarcophilus_harrisii
ENSPSIG00000012172	REXO5	91	40.054	ENSSFOG00015007581	REXO5	93	40.054	Scleropages_formosus
ENSPSIG00000012172	REXO5	91	36.654	ENSSMAG00000000709	REXO5	91	36.654	Scophthalmus_maximus
ENSPSIG00000012172	REXO5	97	34.390	ENSSDUG00000014528	REXO5	97	34.541	Seriola_dumerili
ENSPSIG00000012172	REXO5	91	34.917	ENSSLDG00000007641	REXO5	91	35.504	Seriola_lalandi_dorsalis
ENSPSIG00000012172	REXO5	95	48.425	ENSSSCG00000007855	REXO5	95	47.715	Sus_scrofa
ENSPSIG00000012172	REXO5	94	65.541	ENSTGUG00000009219	REXO5	100	65.541	Taeniopygia_guttata
ENSPSIG00000012172	REXO5	86	34.626	ENSTRUG00000015295	-	96	33.978	Takifugu_rubripes
ENSPSIG00000012172	REXO5	85	45.863	ENSTBEG00000008797	REXO5	86	45.863	Tupaia_belangeri
ENSPSIG00000012172	REXO5	99	46.173	ENSTTRG00000016439	REXO5	99	46.173	Tursiops_truncatus
ENSPSIG00000012172	REXO5	86	46.965	ENSUAMG00000017756	REXO5	99	46.965	Ursus_americanus
ENSPSIG00000012172	REXO5	50	41.809	ENSUMAG00000010466	-	92	41.809	Ursus_maritimus
ENSPSIG00000012172	REXO5	94	44.593	ENSVPAG00000003459	REXO5	94	44.593	Vicugna_pacos
ENSPSIG00000012172	REXO5	94	49.072	ENSVVUG00000023257	REXO5	94	49.072	Vulpes_vulpes
ENSPSIG00000012172	REXO5	94	45.626	ENSXETG00000016735	rexo5	98	45.626	Xenopus_tropicalis
ENSPSIG00000012172	REXO5	78	35.679	ENSXCOG00000015997	REXO5	71	35.679	Xiphophorus_couchianus
ENSPSIG00000012172	REXO5	97	33.213	ENSXMAG00000014770	REXO5	98	33.213	Xiphophorus_maculatus