EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012302 (Gene tree)
Gene ID: 102458422
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 45498 bases
Position: chrJH206693.1:660986-706483
Accession: 102458422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000013757	RTC	PF01137.21	3.9e-43	1	1
ENSPSIP00000013757	RTC_insert	PF05189.13	3.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000013822	RCL1-201	3920	XM_006115150	ENSPSIP00000013757	328 (aa)	-	K7G0E7

Gene Model

Click here to download ENSPSIG00000012302's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012302's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012302	RCL1	100	89.634	ENSG00000120158	RCL1	100	89.302	Homo_sapiens
ENSPSIG00000012302	RCL1	100	77.812	ENSAPOG00000015666	rcl1	88	77.812	Acanthochromis_polyacanthus
ENSPSIG00000012302	RCL1	100	89.939	ENSAMEG00000002631	RCL1	88	89.939	Ailuropoda_melanoleuca
ENSPSIG00000012302	RCL1	100	77.204	ENSACIG00000021195	rcl1	88	77.204	Amphilophus_citrinellus
ENSPSIG00000012302	RCL1	100	76.292	ENSAOCG00000002223	rcl1	88	76.292	Amphiprion_ocellaris
ENSPSIG00000012302	RCL1	100	76.596	ENSAPEG00000006905	rcl1	88	76.596	Amphiprion_percula
ENSPSIG00000012302	RCL1	100	74.468	ENSATEG00000020026	rcl1	88	74.468	Anabas_testudineus
ENSPSIG00000012302	RCL1	100	88.415	ENSAPLG00000006031	RCL1	100	88.415	Anas_platyrhynchos
ENSPSIG00000012302	RCL1	100	87.195	ENSACAG00000003640	RCL1	88	87.195	Anolis_carolinensis
ENSPSIG00000012302	RCL1	100	89.634	ENSANAG00000037372	RCL1	88	89.634	Aotus_nancymaae
ENSPSIG00000012302	RCL1	100	77.204	ENSACLG00000021724	rcl1	88	77.204	Astatotilapia_calliptera
ENSPSIG00000012302	RCL1	100	77.812	ENSAMXG00000033394	rcl1	89	77.812	Astyanax_mexicanus
ENSPSIG00000012302	RCL1	99	45.075	WBGene00022852	ZK1127.5	88	45.075	Caenorhabditis_elegans
ENSPSIG00000012302	RCL1	100	89.329	ENSCJAG00000011202	RCL1	88	89.329	Callithrix_jacchus
ENSPSIG00000012302	RCL1	100	90.549	ENSCAFG00000002091	RCL1	88	90.549	Canis_familiaris
ENSPSIG00000012302	RCL1	100	90.549	ENSCAFG00020000638	RCL1	69	90.549	Canis_lupus_dingo
ENSPSIG00000012302	RCL1	100	89.634	ENSCHIG00000012407	RCL1	88	89.634	Capra_hircus
ENSPSIG00000012302	RCL1	99	89.908	ENSTSYG00000009592	RCL1	97	89.503	Carlito_syrichta
ENSPSIG00000012302	RCL1	77	73.410	ENSCAPG00000013575	RCL1	100	73.410	Cavia_aperea
ENSPSIG00000012302	RCL1	100	89.329	ENSCPOG00000015354	RCL1	88	89.329	Cavia_porcellus
ENSPSIG00000012302	RCL1	100	89.329	ENSCCAG00000033505	RCL1	97	89.011	Cebus_capucinus
ENSPSIG00000012302	RCL1	100	89.024	ENSCATG00000034721	RCL1	97	89.503	Cercocebus_atys
ENSPSIG00000012302	RCL1	100	88.110	ENSCLAG00000007445	RCL1	88	88.110	Chinchilla_lanigera
ENSPSIG00000012302	RCL1	100	89.634	ENSCSAG00000008811	RCL1	88	89.634	Chlorocebus_sabaeus
ENSPSIG00000012302	RCL1	84	81.522	ENSCHOG00000007216	RCL1	86	81.522	Choloepus_hoffmanni
ENSPSIG00000012302	RCL1	100	96.951	ENSCPBG00000025481	RCL1	94	96.951	Chrysemys_picta_bellii
ENSPSIG00000012302	RCL1	100	57.229	ENSCING00000019565	-	88	57.229	Ciona_intestinalis
ENSPSIG00000012302	RCL1	100	89.634	ENSCANG00000027099	RCL1	88	89.634	Colobus_angolensis_palliatus
ENSPSIG00000012302	RCL1	100	89.329	ENSCGRG00001013748	Rcl1	88	89.329	Cricetulus_griseus_chok1gshd
ENSPSIG00000012302	RCL1	100	89.329	ENSCGRG00000005843	Rcl1	99	89.329	Cricetulus_griseus_crigri
ENSPSIG00000012302	RCL1	100	77.204	ENSCSEG00000000712	rcl1	87	77.204	Cynoglossus_semilaevis
ENSPSIG00000012302	RCL1	100	79.027	ENSCVAG00000011536	rcl1	88	79.027	Cyprinodon_variegatus
ENSPSIG00000012302	RCL1	100	73.860	ENSDARG00000038312	rcl1	90	73.860	Danio_rerio
ENSPSIG00000012302	RCL1	81	89.057	ENSDNOG00000019911	RCL1	100	89.057	Dasypus_novemcinctus
ENSPSIG00000012302	RCL1	100	89.634	ENSDORG00000015645	Rcl1	88	89.634	Dipodomys_ordii
ENSPSIG00000012302	RCL1	99	53.593	FBgn0020909	Rtc1	87	53.593	Drosophila_melanogaster
ENSPSIG00000012302	RCL1	82	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSPSIG00000012302	RCL1	100	53.636	ENSEBUG00000016621	-	88	53.636	Eptatretus_burgeri
ENSPSIG00000012302	RCL1	100	90.549	ENSEASG00005010653	RCL1	88	90.549	Equus_asinus_asinus
ENSPSIG00000012302	RCL1	100	90.549	ENSECAG00000015973	RCL1	88	90.549	Equus_caballus
ENSPSIG00000012302	RCL1	92	82.508	ENSEEUG00000009801	RCL1	80	82.508	Erinaceus_europaeus
ENSPSIG00000012302	RCL1	100	73.860	ENSELUG00000007353	rcl1	88	73.860	Esox_lucius
ENSPSIG00000012302	RCL1	100	89.329	ENSFCAG00000014557	RCL1	88	89.329	Felis_catus
ENSPSIG00000012302	RCL1	99	88.073	ENSFALG00000010553	RCL1	87	88.073	Ficedula_albicollis
ENSPSIG00000012302	RCL1	99	87.768	ENSFDAG00000004209	RCL1	100	87.768	Fukomys_damarensis
ENSPSIG00000012302	RCL1	100	79.027	ENSFHEG00000011228	rcl1	90	79.027	Fundulus_heteroclitus
ENSPSIG00000012302	RCL1	100	77.204	ENSGMOG00000004677	rcl1	88	77.204	Gadus_morhua
ENSPSIG00000012302	RCL1	100	89.939	ENSGALG00000015024	RCL1	88	89.939	Gallus_gallus
ENSPSIG00000012302	RCL1	100	77.204	ENSGAFG00000007257	rcl1	88	77.204	Gambusia_affinis
ENSPSIG00000012302	RCL1	100	76.292	ENSGACG00000017474	rcl1	88	76.292	Gasterosteus_aculeatus
ENSPSIG00000012302	RCL1	100	95.732	ENSGAGG00000003689	RCL1	88	95.732	Gopherus_agassizii
ENSPSIG00000012302	RCL1	100	89.634	ENSGGOG00000015041	RCL1	97	90.055	Gorilla_gorilla
ENSPSIG00000012302	RCL1	100	77.508	ENSHBUG00000001393	rcl1	88	77.508	Haplochromis_burtoni
ENSPSIG00000012302	RCL1	100	74.695	ENSHGLG00000005368	-	87	74.695	Heterocephalus_glaber_female
ENSPSIG00000012302	RCL1	100	87.805	ENSHGLG00000016452	RCL1	88	87.805	Heterocephalus_glaber_female
ENSPSIG00000012302	RCL1	100	75.610	ENSHGLG00100018010	-	87	75.610	Heterocephalus_glaber_male
ENSPSIG00000012302	RCL1	99	87.768	ENSHGLG00100008718	-	94	87.768	Heterocephalus_glaber_male
ENSPSIG00000012302	RCL1	100	76.292	ENSHCOG00000020170	rcl1	88	76.292	Hippocampus_comes
ENSPSIG00000012302	RCL1	100	77.812	ENSIPUG00000018054	RCL1	89	77.812	Ictalurus_punctatus
ENSPSIG00000012302	RCL1	100	89.329	ENSSTOG00000000023	RCL1	88	89.329	Ictidomys_tridecemlineatus
ENSPSIG00000012302	RCL1	100	89.329	ENSJJAG00000022803	-	88	89.329	Jaculus_jaculus
ENSPSIG00000012302	RCL1	97	80.757	ENSJJAG00000015632	-	85	80.757	Jaculus_jaculus
ENSPSIG00000012302	RCL1	61	65.672	ENSJJAG00000000764	-	98	65.672	Jaculus_jaculus
ENSPSIG00000012302	RCL1	100	75.988	ENSKMAG00000011946	rcl1	88	75.988	Kryptolebias_marmoratus
ENSPSIG00000012302	RCL1	100	77.204	ENSLBEG00000003957	rcl1	93	77.204	Labrus_bergylta
ENSPSIG00000012302	RCL1	91	79.333	ENSLACG00000004594	RCL1	87	83.154	Latimeria_chalumnae
ENSPSIG00000012302	RCL1	100	83.232	ENSLOCG00000010148	rcl1	87	83.232	Lepisosteus_oculatus
ENSPSIG00000012302	RCL1	100	87.500	ENSLAFG00000017495	RCL1	88	87.500	Loxodonta_africana
ENSPSIG00000012302	RCL1	100	89.634	ENSMFAG00000037906	RCL1	88	89.634	Macaca_fascicularis
ENSPSIG00000012302	RCL1	100	89.634	ENSMNEG00000012288	RCL1	97	89.503	Macaca_nemestrina
ENSPSIG00000012302	RCL1	100	89.634	ENSMLEG00000043088	RCL1	88	89.634	Mandrillus_leucophaeus
ENSPSIG00000012302	RCL1	100	77.508	ENSMAMG00000008311	rcl1	88	77.508	Mastacembelus_armatus
ENSPSIG00000012302	RCL1	100	77.204	ENSMZEG00005017292	rcl1	88	77.204	Maylandia_zebra
ENSPSIG00000012302	RCL1	66	85.845	ENSMGAG00000002245	RCL1	100	85.845	Meleagris_gallopavo
ENSPSIG00000012302	RCL1	66	89.302	ENSMAUG00000008922	Rcl1	100	89.302	Mesocricetus_auratus
ENSPSIG00000012302	RCL1	100	89.329	ENSMICG00000015562	RCL1	88	89.329	Microcebus_murinus
ENSPSIG00000012302	RCL1	100	89.634	ENSMOCG00000012145	Rcl1	88	89.634	Microtus_ochrogaster
ENSPSIG00000012302	RCL1	100	73.636	ENSMMOG00000021264	rcl1	88	73.636	Mola_mola
ENSPSIG00000012302	RCL1	95	89.355	ENSMODG00000015377	RCL1	82	89.355	Monodelphis_domestica
ENSPSIG00000012302	RCL1	100	75.988	ENSMALG00000018618	rcl1	88	75.988	Monopterus_albus
ENSPSIG00000012302	RCL1	100	89.634	MGP_CAROLIEiJ_G0022853	Rcl1	88	89.634	Mus_caroli
ENSPSIG00000012302	RCL1	100	89.634	ENSMUSG00000024785	Rcl1	88	89.634	Mus_musculus
ENSPSIG00000012302	RCL1	100	90.244	MGP_PahariEiJ_G0014346	Rcl1	100	91.765	Mus_pahari
ENSPSIG00000012302	RCL1	100	89.634	MGP_SPRETEiJ_G0023771	Rcl1	100	91.176	Mus_spretus
ENSPSIG00000012302	RCL1	100	89.634	ENSMPUG00000004998	RCL1	88	89.634	Mustela_putorius_furo
ENSPSIG00000012302	RCL1	100	89.024	ENSMLUG00000009654	RCL1	88	89.024	Myotis_lucifugus
ENSPSIG00000012302	RCL1	100	88.720	ENSNGAG00000015327	Rcl1	88	88.720	Nannospalax_galili
ENSPSIG00000012302	RCL1	100	76.900	ENSNBRG00000019854	rcl1	90	76.900	Neolamprologus_brichardi
ENSPSIG00000012302	RCL1	100	86.890	ENSNLEG00000008891	RCL1	88	86.890	Nomascus_leucogenys
ENSPSIG00000012302	RCL1	92	90.429	ENSMEUG00000007653	RCL1	81	90.429	Notamacropus_eugenii
ENSPSIG00000012302	RCL1	100	89.024	ENSOPRG00000010965	RCL1	88	89.024	Ochotona_princeps
ENSPSIG00000012302	RCL1	100	73.193	ENSODEG00000004151	RCL1	96	73.193	Octodon_degus
ENSPSIG00000012302	RCL1	100	77.508	ENSONIG00000003871	rcl1	88	77.508	Oreochromis_niloticus
ENSPSIG00000012302	RCL1	76	85.375	ENSOANG00000013193	-	100	85.375	Ornithorhynchus_anatinus
ENSPSIG00000012302	RCL1	100	89.634	ENSOCUG00000008161	RCL1	88	89.634	Oryctolagus_cuniculus
ENSPSIG00000012302	RCL1	100	74.468	ENSORLG00000010443	rcl1	88	74.468	Oryzias_latipes
ENSPSIG00000012302	RCL1	100	74.468	ENSORLG00020012211	rcl1	88	74.468	Oryzias_latipes_hni
ENSPSIG00000012302	RCL1	100	74.164	ENSORLG00015001122	rcl1	88	74.164	Oryzias_latipes_hsok
ENSPSIG00000012302	RCL1	100	76.596	ENSOMEG00000022976	rcl1	78	76.596	Oryzias_melastigma
ENSPSIG00000012302	RCL1	100	88.720	ENSOGAG00000007480	RCL1	88	88.720	Otolemur_garnettii
ENSPSIG00000012302	RCL1	100	89.329	ENSOARG00000013463	RCL1	88	89.329	Ovis_aries
ENSPSIG00000012302	RCL1	100	89.634	ENSPPAG00000037958	RCL1	88	89.634	Pan_paniscus
ENSPSIG00000012302	RCL1	99	88.957	ENSPPRG00000022645	RCL1	96	89.326	Panthera_pardus
ENSPSIG00000012302	RCL1	99	89.264	ENSPTIG00000019031	RCL1	100	88.372	Panthera_tigris_altaica
ENSPSIG00000012302	RCL1	100	89.329	ENSPTRG00000020743	RCL1	97	89.503	Pan_troglodytes
ENSPSIG00000012302	RCL1	100	89.634	ENSPANG00000025151	RCL1	88	89.634	Papio_anubis
ENSPSIG00000012302	RCL1	100	79.027	ENSPKIG00000021022	rcl1	88	79.027	Paramormyrops_kingsleyae
ENSPSIG00000012302	RCL1	100	75.380	ENSPMGG00000024007	rcl1	88	75.380	Periophthalmus_magnuspinnatus
ENSPSIG00000012302	RCL1	100	89.939	ENSPEMG00000023275	Rcl1	88	89.939	Peromyscus_maniculatus_bairdii
ENSPSIG00000012302	RCL1	92	30.065	ENSPMAG00000009110	rtca	80	30.065	Petromyzon_marinus
ENSPSIG00000012302	RCL1	54	67.598	ENSPMAG00000005419	-	95	67.598	Petromyzon_marinus
ENSPSIG00000012302	RCL1	100	90.244	ENSPCIG00000000188	RCL1	93	90.214	Phascolarctos_cinereus
ENSPSIG00000012302	RCL1	100	77.508	ENSPFOG00000019682	rcl1	88	77.508	Poecilia_formosa
ENSPSIG00000012302	RCL1	100	77.508	ENSPLAG00000022354	rcl1	88	77.508	Poecilia_latipinna
ENSPSIG00000012302	RCL1	100	77.508	ENSPMEG00000008131	rcl1	88	77.508	Poecilia_mexicana
ENSPSIG00000012302	RCL1	100	77.204	ENSPREG00000008032	rcl1	88	77.204	Poecilia_reticulata
ENSPSIG00000012302	RCL1	100	89.329	ENSPPYG00000019244	RCL1	88	89.329	Pongo_abelii
ENSPSIG00000012302	RCL1	99	79.755	ENSPCAG00000001440	RCL1	88	79.755	Procavia_capensis
ENSPSIG00000012302	RCL1	100	90.549	ENSPCOG00000009611	RCL1	97	90.608	Propithecus_coquereli
ENSPSIG00000012302	RCL1	100	89.634	ENSPVAG00000015752	RCL1	88	89.634	Pteropus_vampyrus
ENSPSIG00000012302	RCL1	100	77.204	ENSPNYG00000012910	rcl1	88	77.204	Pundamilia_nyererei
ENSPSIG00000012302	RCL1	100	77.508	ENSPNAG00000028307	rcl1	81	77.508	Pygocentrus_nattereri
ENSPSIG00000012302	RCL1	100	88.720	ENSRNOG00000015491	Rcl1	88	88.720	Rattus_norvegicus
ENSPSIG00000012302	RCL1	100	89.329	ENSRBIG00000035818	RCL1	88	89.329	Rhinopithecus_bieti
ENSPSIG00000012302	RCL1	100	89.634	ENSRROG00000029781	RCL1	97	89.503	Rhinopithecus_roxellana
ENSPSIG00000012302	RCL1	99	35.905	YOL010W	-	87	35.905	Saccharomyces_cerevisiae
ENSPSIG00000012302	RCL1	100	89.024	ENSSBOG00000026369	RCL1	97	89.560	Saimiri_boliviensis_boliviensis
ENSPSIG00000012302	RCL1	100	89.329	ENSSHAG00000014086	RCL1	99	89.329	Sarcophilus_harrisii
ENSPSIG00000012302	RCL1	100	79.027	ENSSFOG00015023020	rcl1	88	79.027	Scleropages_formosus
ENSPSIG00000012302	RCL1	100	76.596	ENSSMAG00000019751	rcl1	76	76.596	Scophthalmus_maximus
ENSPSIG00000012302	RCL1	100	77.508	ENSSDUG00000006349	rcl1	88	77.508	Seriola_dumerili
ENSPSIG00000012302	RCL1	100	77.812	ENSSLDG00000022076	rcl1	88	77.812	Seriola_lalandi_dorsalis
ENSPSIG00000012302	RCL1	100	89.329	ENSSARG00000009260	RCL1	88	89.329	Sorex_araneus
ENSPSIG00000012302	RCL1	100	91.159	ENSSPUG00000016330	RCL1	88	91.159	Sphenodon_punctatus
ENSPSIG00000012302	RCL1	100	77.812	ENSSPAG00000018038	rcl1	88	77.812	Stegastes_partitus
ENSPSIG00000012302	RCL1	100	90.244	ENSSSCG00000005217	RCL1	73	90.244	Sus_scrofa
ENSPSIG00000012302	RCL1	100	87.576	ENSTGUG00000005138	RCL1	88	87.576	Taeniopygia_guttata
ENSPSIG00000012302	RCL1	100	75.076	ENSTRUG00000010493	rcl1	88	75.076	Takifugu_rubripes
ENSPSIG00000012302	RCL1	100	74.772	ENSTNIG00000013214	rcl1	88	74.772	Tetraodon_nigroviridis
ENSPSIG00000012302	RCL1	100	82.622	ENSTBEG00000016339	RCL1	88	82.622	Tupaia_belangeri
ENSPSIG00000012302	RCL1	100	89.024	ENSTTRG00000016525	RCL1	88	89.024	Tursiops_truncatus
ENSPSIG00000012302	RCL1	100	89.939	ENSUAMG00000005598	RCL1	88	89.939	Ursus_americanus
ENSPSIG00000012302	RCL1	99	89.297	ENSUMAG00000017890	RCL1	97	89.297	Ursus_maritimus
ENSPSIG00000012302	RCL1	99	90.520	ENSVPAG00000009188	RCL1	100	90.520	Vicugna_pacos
ENSPSIG00000012302	RCL1	100	90.549	ENSVVUG00000007304	RCL1	89	90.549	Vulpes_vulpes
ENSPSIG00000012302	RCL1	100	75.380	ENSXETG00000000592	rcl1	88	75.380	Xenopus_tropicalis
ENSPSIG00000012302	RCL1	100	77.508	ENSXCOG00000004922	rcl1	88	77.508	Xiphophorus_couchianus
ENSPSIG00000012302	RCL1	100	77.508	ENSXMAG00000022366	RCL1	88	77.508	Xiphophorus_maculatus