EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012567 (Gene tree)
Gene ID: 102458612
Gene Symbol: GFM1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 71607 bases
Position: chrJH209028.1:5145283-5216889
Accession: 102458612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014175	GTP_EFTU	PF00009.27	2.4e-63	1	1
ENSPSIP00000014175	GTP_EFTU_D2	PF03144.25	1.1e-16	1	1
ENSPSIP00000014175	EFG_IV	PF03764.18	1.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014241	GFM1-201	3691	XM_006123452	ENSPSIP00000014175	748 (aa)	XP_006123514	K7G1L4

Gene Model

Click here to download ENSPSIG00000012567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012567	GFM1	93	33.832	ENSPSIG00000012954	GFM2	94	34.239
ENSPSIG00000012567	GFM1	73	38.926	ENSPSIG00000011176	EEF2	72	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012567	GFM1	99	82.661	ENSG00000168827	GFM1	100	98.333	Homo_sapiens
ENSPSIG00000012567	GFM1	92	79.365	ENSAPOG00000016489	gfm1	98	79.365	Acanthochromis_polyacanthus
ENSPSIG00000012567	GFM1	96	84.123	ENSAMEG00000013542	GFM1	99	81.709	Ailuropoda_melanoleuca
ENSPSIG00000012567	GFM1	97	77.092	ENSACIG00000014465	gfm1	95	77.092	Amphilophus_citrinellus
ENSPSIG00000012567	GFM1	99	79.973	ENSAOCG00000006023	gfm1	100	79.973	Amphiprion_ocellaris
ENSPSIG00000012567	GFM1	99	79.840	ENSAPEG00000024499	gfm1	99	81.466	Amphiprion_percula
ENSPSIG00000012567	GFM1	99	79.017	ENSATEG00000013789	gfm1	100	79.017	Anabas_testudineus
ENSPSIG00000012567	GFM1	97	86.345	ENSAPLG00000005022	GFM1	100	86.345	Anas_platyrhynchos
ENSPSIG00000012567	GFM1	98	85.306	ENSACAG00000006829	GFM1	99	85.306	Anolis_carolinensis
ENSPSIG00000012567	GFM1	99	81.891	ENSANAG00000035983	GFM1	100	81.891	Aotus_nancymaae
ENSPSIG00000012567	GFM1	99	80.882	ENSACLG00000016586	gfm1	100	80.882	Astatotilapia_calliptera
ENSPSIG00000012567	GFM1	99	79.947	ENSAMXG00000013435	gfm1	97	81.293	Astyanax_mexicanus
ENSPSIG00000012567	GFM1	99	82.544	ENSBTAG00000027795	GFM1	99	82.124	Bos_taurus
ENSPSIG00000012567	GFM1	97	55.328	WBGene00009246	gfm-1	99	55.182	Caenorhabditis_elegans
ENSPSIG00000012567	GFM1	99	82.219	ENSCJAG00000000363	GFM1	99	82.219	Callithrix_jacchus
ENSPSIG00000012567	GFM1	96	83.844	ENSCAFG00000009006	GFM1	100	83.580	Canis_familiaris
ENSPSIG00000012567	GFM1	99	82.172	ENSCAFG00020005878	GFM1	98	83.844	Canis_lupus_dingo
ENSPSIG00000012567	GFM1	99	82.815	ENSCHIG00000015220	GFM1	99	82.392	Capra_hircus
ENSPSIG00000012567	GFM1	100	81.541	ENSTSYG00000002013	GFM1	100	81.541	Carlito_syrichta
ENSPSIG00000012567	GFM1	96	73.407	ENSCAPG00000005699	GFM1	97	73.407	Cavia_aperea
ENSPSIG00000012567	GFM1	99	82.708	ENSCPOG00000001194	GFM1	98	82.708	Cavia_porcellus
ENSPSIG00000012567	GFM1	98	83.629	ENSCCAG00000025561	GFM1	98	83.629	Cebus_capucinus
ENSPSIG00000012567	GFM1	99	82.615	ENSCATG00000037622	GFM1	99	82.615	Cercocebus_atys
ENSPSIG00000012567	GFM1	99	82.297	ENSCLAG00000002503	GFM1	97	82.297	Chinchilla_lanigera
ENSPSIG00000012567	GFM1	99	82.480	ENSCSAG00000012162	GFM1	99	82.480	Chlorocebus_sabaeus
ENSPSIG00000012567	GFM1	99	73.727	ENSCHOG00000004867	GFM1	98	73.727	Choloepus_hoffmanni
ENSPSIG00000012567	GFM1	100	92.914	ENSCPBG00000018367	GFM1	100	92.914	Chrysemys_picta_bellii
ENSPSIG00000012567	GFM1	97	58.503	ENSCING00000011960	-	95	58.503	Ciona_intestinalis
ENSPSIG00000012567	GFM1	94	61.080	ENSCSAVG00000008514	-	100	58.717	Ciona_savignyi
ENSPSIG00000012567	GFM1	99	82.124	ENSCANG00000031714	GFM1	100	81.625	Colobus_angolensis_palliatus
ENSPSIG00000012567	GFM1	99	81.614	ENSCGRG00001022095	GFM1	100	81.614	Cricetulus_griseus_chok1gshd
ENSPSIG00000012567	GFM1	99	81.614	ENSCGRG00000012043	GFM1	100	81.614	Cricetulus_griseus_crigri
ENSPSIG00000012567	GFM1	97	78.532	ENSCSEG00000017088	gfm1	99	78.532	Cynoglossus_semilaevis
ENSPSIG00000012567	GFM1	99	81.586	ENSCVAG00000004126	gfm1	99	82.254	Cyprinodon_variegatus
ENSPSIG00000012567	GFM1	99	78.447	ENSDARG00000063624	gfm1	100	78.447	Danio_rerio
ENSPSIG00000012567	GFM1	55	80.440	ENSDNOG00000016385	-	100	80.440	Dasypus_novemcinctus
ENSPSIG00000012567	GFM1	99	80.671	ENSDORG00000014165	Gfm1	99	80.671	Dipodomys_ordii
ENSPSIG00000012567	GFM1	95	67.461	FBgn0263133	mEFG1	96	67.461	Drosophila_melanogaster
ENSPSIG00000012567	GFM1	96	75.728	ENSETEG00000019197	GFM1	100	73.545	Echinops_telfairi
ENSPSIG00000012567	GFM1	90	65.185	ENSEBUG00000012794	gfm1	100	65.185	Eptatretus_burgeri
ENSPSIG00000012567	GFM1	97	60.882	ENSEEUG00000000429	GFM1	100	60.882	Erinaceus_europaeus
ENSPSIG00000012567	GFM1	99	78.743	ENSELUG00000014728	gfm1	100	78.743	Esox_lucius
ENSPSIG00000012567	GFM1	98	82.138	ENSFCAG00000013291	GFM1	99	81.879	Felis_catus
ENSPSIG00000012567	GFM1	90	84.741	ENSFALG00000007619	GFM1	100	84.741	Ficedula_albicollis
ENSPSIG00000012567	GFM1	99	82.597	ENSFDAG00000016559	GFM1	99	82.597	Fukomys_damarensis
ENSPSIG00000012567	GFM1	99	79.840	ENSFHEG00000006091	gfm1	100	79.840	Fundulus_heteroclitus
ENSPSIG00000012567	GFM1	97	79.890	ENSGMOG00000010161	gfm1	99	79.890	Gadus_morhua
ENSPSIG00000012567	GFM1	100	85.027	ENSGALG00000009634	GFM1	100	85.027	Gallus_gallus
ENSPSIG00000012567	GFM1	99	80.507	ENSGAFG00000012527	gfm1	100	80.507	Gambusia_affinis
ENSPSIG00000012567	GFM1	99	79.200	ENSGACG00000009864	gfm1	100	79.200	Gasterosteus_aculeatus
ENSPSIG00000012567	GFM1	99	82.930	ENSGGOG00000003085	GFM1	99	83.288	Gorilla_gorilla
ENSPSIG00000012567	GFM1	99	81.283	ENSHBUG00000002120	gfm1	100	81.283	Haplochromis_burtoni
ENSPSIG00000012567	GFM1	99	81.830	ENSHGLG00000016855	GFM1	99	81.720	Heterocephalus_glaber_female
ENSPSIG00000012567	GFM1	99	81.830	ENSHGLG00100013049	GFM1	99	81.720	Heterocephalus_glaber_male
ENSPSIG00000012567	GFM1	99	80.080	ENSHCOG00000007638	gfm1	100	80.080	Hippocampus_comes
ENSPSIG00000012567	GFM1	97	81.630	ENSIPUG00000005873	gfm1	100	79.814	Ictalurus_punctatus
ENSPSIG00000012567	GFM1	99	80.965	ENSSTOG00000010150	GFM1	99	80.965	Ictidomys_tridecemlineatus
ENSPSIG00000012567	GFM1	99	81.611	ENSJJAG00000016447	Gfm1	98	81.611	Jaculus_jaculus
ENSPSIG00000012567	GFM1	99	80.514	ENSKMAG00000020768	gfm1	100	79.545	Kryptolebias_marmoratus
ENSPSIG00000012567	GFM1	94	81.740	ENSLBEG00000021315	gfm1	100	81.740	Labrus_bergylta
ENSPSIG00000012567	GFM1	99	81.928	ENSLACG00000012295	GFM1	100	81.928	Latimeria_chalumnae
ENSPSIG00000012567	GFM1	97	76.786	ENSLOCG00000003778	gfm1	99	76.786	Lepisosteus_oculatus
ENSPSIG00000012567	GFM1	99	80.405	ENSLAFG00000010945	GFM1	100	80.276	Loxodonta_africana
ENSPSIG00000012567	GFM1	99	82.884	ENSMFAG00000035731	GFM1	99	82.884	Macaca_fascicularis
ENSPSIG00000012567	GFM1	99	82.884	ENSMMUG00000004961	GFM1	99	82.884	Macaca_mulatta
ENSPSIG00000012567	GFM1	99	82.615	ENSMNEG00000033245	GFM1	99	82.615	Macaca_nemestrina
ENSPSIG00000012567	GFM1	97	81.655	ENSMLEG00000030908	GFM1	99	81.892	Mandrillus_leucophaeus
ENSPSIG00000012567	GFM1	99	80.774	ENSMAMG00000011760	gfm1	100	80.774	Mastacembelus_armatus
ENSPSIG00000012567	GFM1	99	81.016	ENSMZEG00005016639	gfm1	100	81.016	Maylandia_zebra
ENSPSIG00000012567	GFM1	97	86.557	ENSMGAG00000010641	GFM1	98	86.557	Meleagris_gallopavo
ENSPSIG00000012567	GFM1	99	82.290	ENSMAUG00000000611	Gfm1	100	82.290	Mesocricetus_auratus
ENSPSIG00000012567	GFM1	97	84.016	ENSMICG00000049086	GFM1	99	82.999	Microcebus_murinus
ENSPSIG00000012567	GFM1	99	82.290	ENSMOCG00000000465	Gfm1	100	82.290	Microtus_ochrogaster
ENSPSIG00000012567	GFM1	99	80.054	ENSMMOG00000012538	gfm1	99	80.054	Mola_mola
ENSPSIG00000012567	GFM1	99	81.600	ENSMODG00000015673	GFM1	100	81.600	Monodelphis_domestica
ENSPSIG00000012567	GFM1	99	79.459	ENSMALG00000012508	gfm1	98	79.459	Monopterus_albus
ENSPSIG00000012567	GFM1	99	81.092	MGP_CAROLIEiJ_G0025052	Gfm1	100	81.092	Mus_caroli
ENSPSIG00000012567	GFM1	99	81.092	ENSMUSG00000027774	Gfm1	100	81.092	Mus_musculus
ENSPSIG00000012567	GFM1	99	81.491	MGP_PahariEiJ_G0026495	Gfm1	100	81.491	Mus_pahari
ENSPSIG00000012567	GFM1	99	81.092	MGP_SPRETEiJ_G0025994	Gfm1	100	81.092	Mus_spretus
ENSPSIG00000012567	GFM1	99	81.720	ENSMPUG00000002859	GFM1	99	81.720	Mustela_putorius_furo
ENSPSIG00000012567	GFM1	99	81.963	ENSMLUG00000000452	GFM1	100	81.963	Myotis_lucifugus
ENSPSIG00000012567	GFM1	99	80.959	ENSNGAG00000012375	Gfm1	100	80.959	Nannospalax_galili
ENSPSIG00000012567	GFM1	97	82.920	ENSNBRG00000004631	gfm1	99	82.920	Neolamprologus_brichardi
ENSPSIG00000012567	GFM1	99	82.661	ENSNLEG00000004176	GFM1	99	83.019	Nomascus_leucogenys
ENSPSIG00000012567	GFM1	91	73.529	ENSMEUG00000007784	GFM1	99	73.529	Notamacropus_eugenii
ENSPSIG00000012567	GFM1	99	80.882	ENSOPRG00000009860	GFM1	100	80.882	Ochotona_princeps
ENSPSIG00000012567	GFM1	98	83.762	ENSODEG00000004316	GFM1	99	83.534	Octodon_degus
ENSPSIG00000012567	GFM1	99	81.308	ENSONIG00000003772	gfm1	100	81.308	Oreochromis_niloticus
ENSPSIG00000012567	GFM1	98	83.627	ENSOCUG00000013561	GFM1	100	82.626	Oryctolagus_cuniculus
ENSPSIG00000012567	GFM1	95	82.345	ENSORLG00000006487	gfm1	100	82.345	Oryzias_latipes
ENSPSIG00000012567	GFM1	99	80.295	ENSORLG00020003362	gfm1	99	80.295	Oryzias_latipes_hni
ENSPSIG00000012567	GFM1	99	80.027	ENSORLG00015005829	gfm1	99	80.027	Oryzias_latipes_hsok
ENSPSIG00000012567	GFM1	99	81.099	ENSOMEG00000012894	gfm1	99	81.099	Oryzias_melastigma
ENSPSIG00000012567	GFM1	99	81.745	ENSOGAG00000008298	GFM1	99	81.745	Otolemur_garnettii
ENSPSIG00000012567	GFM1	96	83.495	ENSOARG00000002409	GFM1	99	83.495	Ovis_aries
ENSPSIG00000012567	GFM1	99	82.930	ENSPPAG00000033881	GFM1	99	83.288	Pan_paniscus
ENSPSIG00000012567	GFM1	98	82.138	ENSPPRG00000009281	GFM1	99	81.879	Panthera_pardus
ENSPSIG00000012567	GFM1	98	82.003	ENSPTIG00000012416	GFM1	99	81.745	Panthera_tigris_altaica
ENSPSIG00000012567	GFM1	99	82.930	ENSPTRG00000015570	GFM1	99	83.288	Pan_troglodytes
ENSPSIG00000012567	GFM1	99	82.884	ENSPANG00000016512	GFM1	99	82.884	Papio_anubis
ENSPSIG00000012567	GFM1	99	80.348	ENSPKIG00000004876	gfm1	100	80.348	Paramormyrops_kingsleyae
ENSPSIG00000012567	GFM1	97	79.696	ENSPMGG00000014068	gfm1	99	79.696	Periophthalmus_magnuspinnatus
ENSPSIG00000012567	GFM1	99	81.891	ENSPEMG00000008942	Gfm1	100	81.891	Peromyscus_maniculatus_bairdii
ENSPSIG00000012567	GFM1	86	79.627	ENSPCIG00000020195	GFM1	99	79.627	Phascolarctos_cinereus
ENSPSIG00000012567	GFM1	99	80.345	ENSPFOG00000011022	gfm1	100	80.345	Poecilia_formosa
ENSPSIG00000012567	GFM1	98	81.335	ENSPLAG00000019585	gfm1	100	79.637	Poecilia_latipinna
ENSPSIG00000012567	GFM1	99	80.212	ENSPMEG00000012376	gfm1	100	80.212	Poecilia_mexicana
ENSPSIG00000012567	GFM1	99	80.374	ENSPREG00000001332	gfm1	95	80.374	Poecilia_reticulata
ENSPSIG00000012567	GFM1	99	82.930	ENSPPYG00000014244	GFM1	99	83.288	Pongo_abelii
ENSPSIG00000012567	GFM1	94	81.081	ENSPCAG00000008934	GFM1	100	81.081	Procavia_capensis
ENSPSIG00000012567	GFM1	98	83.629	ENSPCOG00000022259	GFM1	100	82.228	Propithecus_coquereli
ENSPSIG00000012567	GFM1	99	81.830	ENSPVAG00000013605	GFM1	99	81.745	Pteropus_vampyrus
ENSPSIG00000012567	GFM1	97	82.920	ENSPNYG00000006037	gfm1	98	82.920	Pundamilia_nyererei
ENSPSIG00000012567	GFM1	99	80.080	ENSPNAG00000001237	gfm1	100	80.080	Pygocentrus_nattereri
ENSPSIG00000012567	GFM1	99	81.625	ENSRNOG00000012873	Gfm1	100	81.625	Rattus_norvegicus
ENSPSIG00000012567	GFM1	99	82.124	ENSRBIG00000031363	GFM1	100	81.625	Rhinopithecus_bieti
ENSPSIG00000012567	GFM1	99	82.258	ENSRROG00000031081	GFM1	100	81.758	Rhinopithecus_roxellana
ENSPSIG00000012567	GFM1	92	59.195	YLR069C	-	90	59.195	Saccharomyces_cerevisiae
ENSPSIG00000012567	GFM1	99	83.288	ENSSBOG00000023252	GFM1	99	83.288	Saimiri_boliviensis_boliviensis
ENSPSIG00000012567	GFM1	99	82.568	ENSSHAG00000017772	GFM1	99	82.568	Sarcophilus_harrisii
ENSPSIG00000012567	GFM1	99	80.107	ENSSFOG00015003117	gfm1	99	81.328	Scleropages_formosus
ENSPSIG00000012567	GFM1	99	79.759	ENSSMAG00000013221	gfm1	100	79.017	Scophthalmus_maximus
ENSPSIG00000012567	GFM1	99	80.702	ENSSDUG00000018665	gfm1	100	79.814	Seriola_dumerili
ENSPSIG00000012567	GFM1	99	80.593	ENSSLDG00000020606	gfm1	100	79.814	Seriola_lalandi_dorsalis
ENSPSIG00000012567	GFM1	99	83.087	ENSSPUG00000018686	GFM1	100	83.087	Sphenodon_punctatus
ENSPSIG00000012567	GFM1	99	80.507	ENSSPAG00000008800	gfm1	100	80.507	Stegastes_partitus
ENSPSIG00000012567	GFM1	99	82.409	ENSSSCG00000025651	GFM1	99	81.989	Sus_scrofa
ENSPSIG00000012567	GFM1	99	78.877	ENSTRUG00000009244	gfm1	100	78.877	Takifugu_rubripes
ENSPSIG00000012567	GFM1	99	79.679	ENSTNIG00000007729	gfm1	100	79.679	Tetraodon_nigroviridis
ENSPSIG00000012567	GFM1	90	74.519	ENSTBEG00000017404	GFM1	89	74.519	Tupaia_belangeri
ENSPSIG00000012567	GFM1	98	82.065	ENSTTRG00000001735	GFM1	97	82.065	Tursiops_truncatus
ENSPSIG00000012567	GFM1	98	82.138	ENSUAMG00000026381	GFM1	99	81.879	Ursus_americanus
ENSPSIG00000012567	GFM1	98	82.138	ENSUMAG00000011268	GFM1	99	81.879	Ursus_maritimus
ENSPSIG00000012567	GFM1	99	78.890	ENSVPAG00000009444	GFM1	99	78.495	Vicugna_pacos
ENSPSIG00000012567	GFM1	99	82.027	ENSVVUG00000020091	GFM1	100	83.284	Vulpes_vulpes
ENSPSIG00000012567	GFM1	99	82.979	ENSXETG00000032551	GFM1	100	82.979	Xenopus_tropicalis
ENSPSIG00000012567	GFM1	53	77.750	ENSXCOG00000012590	gfm1	92	77.750	Xiphophorus_couchianus
ENSPSIG00000012567	GFM1	99	80.507	ENSXMAG00000000261	gfm1	100	80.507	Xiphophorus_maculatus