EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 2198 bases
Position: chrJH207983.1:298547-300744
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014059	APOBEC_N	PF08210.11	2.1e-31	1	1
ENSPSIP00000014059	APOBEC_C	PF05240.14	2.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014124	-	693	-	ENSPSIP00000014059	231 (aa)	-	K7G199

Gene Model

Click here to download ENSPSIG00000012568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012568	-	57	95.098	ENSPSIG00000012791	-	71	95.098
ENSPSIG00000012568	-	60	31.875	ENSPSIG00000013283	AICDA	82	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012568	-	99	42.979	ENSG00000111701	APOBEC1	99	42.979	Homo_sapiens
ENSPSIG00000012568	-	95	42.920	ENSAMEG00000007098	APOBEC1	95	42.920	Ailuropoda_melanoleuca
ENSPSIG00000012568	-	74	41.279	ENSACAG00000028578	-	94	41.279	Anolis_carolinensis
ENSPSIG00000012568	-	89	43.439	ENSANAG00000027743	APOBEC1	89	43.439	Aotus_nancymaae
ENSPSIG00000012568	-	99	38.655	ENSBTAG00000014683	APOBEC1	99	38.655	Bos_taurus
ENSPSIG00000012568	-	93	43.723	ENSCJAG00000005398	APOBEC1	99	43.723	Callithrix_jacchus
ENSPSIG00000012568	-	80	46.486	ENSCAFG00000013901	APOBEC1	78	46.486	Canis_familiaris
ENSPSIG00000012568	-	75	48.276	ENSCAFG00020003511	APOBEC1	72	48.276	Canis_lupus_dingo
ENSPSIG00000012568	-	81	44.041	ENSCHIG00000011898	APOBEC1	80	44.041	Capra_hircus
ENSPSIG00000012568	-	60	46.043	ENSTSYG00000029141	APOBEC1	98	46.043	Carlito_syrichta
ENSPSIG00000012568	-	74	47.368	ENSCAPG00000015882	-	79	47.368	Cavia_aperea
ENSPSIG00000012568	-	80	44.324	ENSCPOG00000033068	APOBEC1	78	44.324	Cavia_porcellus
ENSPSIG00000012568	-	99	44.082	ENSCCAG00000022258	APOBEC1	99	44.082	Cebus_capucinus
ENSPSIG00000012568	-	99	43.220	ENSCATG00000021613	APOBEC1	94	43.220	Cercocebus_atys
ENSPSIG00000012568	-	80	42.703	ENSCLAG00000014645	APOBEC1	80	42.703	Chinchilla_lanigera
ENSPSIG00000012568	-	77	44.865	ENSCSAG00000009817	APOBEC1	96	44.865	Chlorocebus_sabaeus
ENSPSIG00000012568	-	95	73.182	ENSCPBG00000017398	-	96	73.182	Chrysemys_picta_bellii
ENSPSIG00000012568	-	77	46.369	ENSCPBG00000014331	-	76	44.767	Chrysemys_picta_bellii
ENSPSIG00000012568	-	75	78.736	ENSCPBG00000014328	-	76	78.736	Chrysemys_picta_bellii
ENSPSIG00000012568	-	75	82.184	ENSCPBG00000014327	-	65	82.184	Chrysemys_picta_bellii
ENSPSIG00000012568	-	76	48.864	ENSCPBG00000014335	-	71	48.864	Chrysemys_picta_bellii
ENSPSIG00000012568	-	97	42.672	ENSCANG00000038359	APOBEC1	100	42.672	Colobus_angolensis_palliatus
ENSPSIG00000012568	-	94	39.815	ENSCGRG00001011130	Apobec1	91	39.815	Cricetulus_griseus_chok1gshd
ENSPSIG00000012568	-	94	39.815	ENSCGRG00000008644	Apobec1	91	39.815	Cricetulus_griseus_crigri
ENSPSIG00000012568	-	80	44.324	ENSDNOG00000010926	APOBEC1	78	44.324	Dasypus_novemcinctus
ENSPSIG00000012568	-	74	42.105	ENSDORG00000023717	Apobec1	80	42.105	Dipodomys_ordii
ENSPSIG00000012568	-	96	41.841	ENSETEG00000004867	APOBEC1	99	41.841	Echinops_telfairi
ENSPSIG00000012568	-	79	44.505	ENSEASG00005015951	APOBEC1	76	44.505	Equus_asinus_asinus
ENSPSIG00000012568	-	55	51.562	ENSECAG00000017163	APOBEC1	67	51.562	Equus_caballus
ENSPSIG00000012568	-	56	44.961	ENSEEUG00000007530	-	61	44.961	Erinaceus_europaeus
ENSPSIG00000012568	-	75	44.509	ENSEEUG00000009112	-	76	44.509	Erinaceus_europaeus
ENSPSIG00000012568	-	80	44.324	ENSFCAG00000009350	APOBEC1	78	44.324	Felis_catus
ENSPSIG00000012568	-	75	43.448	ENSFALG00000007257	-	81	43.448	Ficedula_albicollis
ENSPSIG00000012568	-	78	41.081	ENSFDAG00000018470	APOBEC1	88	41.081	Fukomys_damarensis
ENSPSIG00000012568	-	87	82.587	ENSGAGG00000006624	-	73	82.587	Gopherus_agassizii
ENSPSIG00000012568	-	84	63.265	ENSGAGG00000021745	-	72	64.796	Gopherus_agassizii
ENSPSIG00000012568	-	75	78.035	ENSGAGG00000021744	-	68	78.035	Gopherus_agassizii
ENSPSIG00000012568	-	75	49.143	ENSGAGG00000011837	-	85	50.602	Gopherus_agassizii
ENSPSIG00000012568	-	80	51.075	ENSGAGG00000004947	-	92	51.075	Gopherus_agassizii
ENSPSIG00000012568	-	95	39.648	ENSHGLG00000001495	APOBEC1	96	39.648	Heterocephalus_glaber_female
ENSPSIG00000012568	-	90	40.741	ENSHGLG00100002187	APOBEC1	91	40.741	Heterocephalus_glaber_male
ENSPSIG00000012568	-	60	44.604	ENSSTOG00000021971	APOBEC1	99	43.878	Ictidomys_tridecemlineatus
ENSPSIG00000012568	-	75	45.714	ENSJJAG00000022108	Apobec1	75	45.714	Jaculus_jaculus
ENSPSIG00000012568	-	75	45.402	ENSLAFG00000030837	APOBEC1	78	45.402	Loxodonta_africana
ENSPSIG00000012568	-	99	41.702	ENSMFAG00000000277	APOBEC1	99	41.702	Macaca_fascicularis
ENSPSIG00000012568	-	99	41.702	ENSMNEG00000029670	APOBEC1	99	41.702	Macaca_nemestrina
ENSPSIG00000012568	-	99	43.220	ENSMLEG00000036301	APOBEC1	99	43.220	Mandrillus_leucophaeus
ENSPSIG00000012568	-	76	45.455	ENSMAUG00000022167	Apobec1	79	45.455	Mesocricetus_auratus
ENSPSIG00000012568	-	99	38.136	ENSMICG00000043645	APOBEC1	99	38.136	Microcebus_murinus
ENSPSIG00000012568	-	81	43.011	ENSMODG00000018004	APOBEC1	78	43.011	Monodelphis_domestica
ENSPSIG00000012568	-	81	42.473	ENSMUSG00000040613	Apobec1	98	38.333	Mus_musculus
ENSPSIG00000012568	-	81	43.011	MGP_PahariEiJ_G0022580	-	98	39.167	Mus_pahari
ENSPSIG00000012568	-	81	42.473	MGP_SPRETEiJ_G0029857	Apobec1	98	38.333	Mus_spretus
ENSPSIG00000012568	-	96	40.611	ENSMPUG00000017532	APOBEC1	97	40.611	Mustela_putorius_furo
ENSPSIG00000012568	-	79	43.956	ENSNGAG00000022607	Apobec1	79	43.956	Nannospalax_galili
ENSPSIG00000012568	-	99	42.979	ENSNLEG00000005342	APOBEC1	99	42.979	Nomascus_leucogenys
ENSPSIG00000012568	-	81	41.935	ENSMEUG00000013406	APOBEC1	78	41.935	Notamacropus_eugenii
ENSPSIG00000012568	-	74	41.520	ENSOPRG00000009508	-	94	41.520	Ochotona_princeps
ENSPSIG00000012568	-	99	38.559	ENSOCUG00000025736	APOBEC1	88	38.559	Oryctolagus_cuniculus
ENSPSIG00000012568	-	91	41.743	ENSOGAG00000026415	APOBEC1	92	41.743	Otolemur_garnettii
ENSPSIG00000012568	-	82	43.878	ENSOARG00000002072	APOBEC1	82	43.878	Ovis_aries
ENSPSIG00000012568	-	98	41.810	ENSPPAG00000027657	APOBEC1	98	41.810	Pan_paniscus
ENSPSIG00000012568	-	80	43.784	ENSPPRG00000012182	APOBEC1	78	43.784	Panthera_pardus
ENSPSIG00000012568	-	80	43.784	ENSPTIG00000020280	APOBEC1	78	43.784	Panthera_tigris_altaica
ENSPSIG00000012568	-	99	42.979	ENSPTRG00000004614	APOBEC1	99	42.979	Pan_troglodytes
ENSPSIG00000012568	-	99	43.220	ENSPANG00000021027	APOBEC1	99	43.220	Papio_anubis
ENSPSIG00000012568	-	81	43.548	ENSPEMG00000023841	Apobec1	81	43.548	Peromyscus_maniculatus_bairdii
ENSPSIG00000012568	-	81	42.473	ENSPCIG00000023973	APOBEC1	78	42.473	Phascolarctos_cinereus
ENSPSIG00000012568	-	99	42.553	ENSPPYG00000004228	APOBEC1	94	42.553	Pongo_abelii
ENSPSIG00000012568	-	81	43.011	ENSPCAG00000008733	APOBEC1	99	43.011	Procavia_capensis
ENSPSIG00000012568	-	94	41.518	ENSPCOG00000013957	APOBEC1	98	41.518	Propithecus_coquereli
ENSPSIG00000012568	-	62	42.657	ENSPVAG00000010709	APOBEC1	61	42.657	Pteropus_vampyrus
ENSPSIG00000012568	-	81	40.860	ENSRNOG00000015411	Apobec1	81	40.860	Rattus_norvegicus
ENSPSIG00000012568	-	99	42.373	ENSRBIG00000031161	APOBEC1	99	42.373	Rhinopithecus_bieti
ENSPSIG00000012568	-	99	41.949	ENSRROG00000033576	APOBEC1	99	41.949	Rhinopithecus_roxellana
ENSPSIG00000012568	-	75	47.977	ENSSBOG00000030587	APOBEC1	97	47.977	Saimiri_boliviensis_boliviensis
ENSPSIG00000012568	-	75	45.402	ENSSHAG00000008925	APOBEC1	76	45.402	Sarcophilus_harrisii
ENSPSIG00000012568	-	74	46.784	ENSSARG00000000032	-	99	46.784	Sorex_araneus
ENSPSIG00000012568	-	57	48.485	ENSSARG00000011972	-	99	48.485	Sorex_araneus
ENSPSIG00000012568	-	75	44.693	ENSSPUG00000009044	-	68	44.693	Sphenodon_punctatus
ENSPSIG00000012568	-	96	41.921	ENSSSCG00000000668	APOBEC1	97	41.921	Sus_scrofa
ENSPSIG00000012568	-	63	45.517	ENSTGUG00000013118	-	99	45.517	Taeniopygia_guttata
ENSPSIG00000012568	-	74	46.199	ENSTBEG00000010043	APOBEC1	72	46.199	Tupaia_belangeri
ENSPSIG00000012568	-	80	42.162	ENSTTRG00000014015	APOBEC1	98	42.162	Tursiops_truncatus
ENSPSIG00000012568	-	95	42.035	ENSUAMG00000011636	APOBEC1	92	42.035	Ursus_americanus
ENSPSIG00000012568	-	95	42.035	ENSUMAG00000016552	APOBEC1	92	42.035	Ursus_maritimus
ENSPSIG00000012568	-	80	40.217	ENSVPAG00000001343	APOBEC1	78	40.217	Vicugna_pacos
ENSPSIG00000012568	-	80	47.027	ENSVVUG00000010522	APOBEC1	78	47.027	Vulpes_vulpes