EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012595 (Gene tree)
Gene ID: 102457987
Gene Symbol: CHD1L
Alias: -
Full Name: chromodomain helicase DNA binding protein 1 like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 48949 bases
Position: chrJH211521.1:68058-117006
Accession: 102457987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014222	ResIII	PF04851.15	2.5e-09	1	1
ENSPSIP00000014235	ResIII	PF04851.15	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014289	CHD1L-201	4673	XM_006132874	ENSPSIP00000014222	898 (aa)	XP_006132936	K7G1R1
ENSPSIT00000014302	CHD1L-202	2759	-	ENSPSIP00000014235	917 (aa)	-	K7G1S4

Gene Model

Click here to download ENSPSIG00000012595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012595's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012595	CHD1L	56	38.200	ENSPSIG00000005462	HELLS	74	38.200
ENSPSIG00000012595	CHD1L	50	31.423	ENSPSIG00000010627	ERCC6L2	78	31.434
ENSPSIG00000012595	CHD1L	61	44.077	ENSPSIG00000004177	SMARCA5	57	44.077
ENSPSIG00000012595	CHD1L	50	30.409	ENSPSIG00000003258	RAD54L	69	30.502
ENSPSIG00000012595	CHD1L	50	32.359	ENSPSIG00000002383	-	61	32.359
ENSPSIG00000012595	CHD1L	61	44.834	ENSPSIG00000010101	SMARCA1	58	44.834

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012595	CHD1L	95	77.140	ENSG00000131778	CHD1L	97	76.872	Homo_sapiens
ENSPSIG00000012595	CHD1L	94	65.253	ENSAPOG00000001539	chd1l	96	65.724	Acanthochromis_polyacanthus
ENSPSIG00000012595	CHD1L	98	75.367	ENSAMEG00000017063	CHD1L	97	75.973	Ailuropoda_melanoleuca
ENSPSIG00000012595	CHD1L	94	64.277	ENSACIG00000001164	chd1l	98	64.550	Amphilophus_citrinellus
ENSPSIG00000012595	CHD1L	94	64.836	ENSAOCG00000014510	chd1l	87	63.770	Amphiprion_ocellaris
ENSPSIG00000012595	CHD1L	94	62.750	ENSAPEG00000017573	chd1l	93	62.985	Amphiprion_percula
ENSPSIG00000012595	CHD1L	94	62.588	ENSAPEG00000017450	chd1l	93	63.059	Amphiprion_percula
ENSPSIG00000012595	CHD1L	97	64.041	ENSATEG00000013058	chd1l	91	66.038	Anabas_testudineus
ENSPSIG00000012595	CHD1L	94	81.775	ENSAPLG00000009976	CHD1L	94	82.130	Anas_platyrhynchos
ENSPSIG00000012595	CHD1L	97	74.972	ENSACAG00000017686	CHD1L	100	74.365	Anolis_carolinensis
ENSPSIG00000012595	CHD1L	95	76.553	ENSANAG00000024347	CHD1L	94	76.733	Aotus_nancymaae
ENSPSIG00000012595	CHD1L	96	64.498	ENSACLG00000019304	chd1l	95	64.931	Astatotilapia_calliptera
ENSPSIG00000012595	CHD1L	98	59.076	ENSAMXG00000012367	chd1l	88	59.076	Astyanax_mexicanus
ENSPSIG00000012595	CHD1L	97	75.945	ENSBTAG00000020831	CHD1L	97	76.032	Bos_taurus
ENSPSIG00000012595	CHD1L	95	76.553	ENSCJAG00000002406	CHD1L	95	76.733	Callithrix_jacchus
ENSPSIG00000012595	CHD1L	97	72.707	ENSCAFG00000010944	CHD1L	97	73.165	Canis_familiaris
ENSPSIG00000012595	CHD1L	95	76.526	ENSCAFG00020020121	CHD1L	97	76.526	Canis_lupus_dingo
ENSPSIG00000012595	CHD1L	97	75.400	ENSCHIG00000013871	CHD1L	97	75.803	Capra_hircus
ENSPSIG00000012595	CHD1L	93	77.566	ENSTSYG00000003005	CHD1L	98	77.658	Carlito_syrichta
ENSPSIG00000012595	CHD1L	95	75.000	ENSCPOG00000009000	CHD1L	97	74.057	Cavia_porcellus
ENSPSIG00000012595	CHD1L	96	74.014	ENSCCAG00000036079	CHD1L	95	74.186	Cebus_capucinus
ENSPSIG00000012595	CHD1L	96	76.667	ENSCATG00000031044	CHD1L	96	76.579	Cercocebus_atys
ENSPSIG00000012595	CHD1L	95	77.246	ENSCLAG00000000880	CHD1L	96	77.336	Chinchilla_lanigera
ENSPSIG00000012595	CHD1L	96	76.667	ENSCSAG00000018386	CHD1L	96	76.579	Chlorocebus_sabaeus
ENSPSIG00000012595	CHD1L	97	93.096	ENSCPBG00000002600	CHD1L	100	92.212	Chrysemys_picta_bellii
ENSPSIG00000012595	CHD1L	97	75.688	ENSCANG00000020239	CHD1L	96	75.775	Colobus_angolensis_palliatus
ENSPSIG00000012595	CHD1L	94	76.118	ENSCGRG00001021624	Chd1l	95	76.118	Cricetulus_griseus_chok1gshd
ENSPSIG00000012595	CHD1L	92	76.082	ENSCGRG00000007554	Chd1l	98	76.082	Cricetulus_griseus_crigri
ENSPSIG00000012595	CHD1L	99	62.542	ENSCVAG00000002595	chd1l	91	62.959	Cyprinodon_variegatus
ENSPSIG00000012595	CHD1L	96	64.123	ENSDARG00000015471	chd1l	87	63.586	Danio_rerio
ENSPSIG00000012595	CHD1L	98	75.028	ENSDNOG00000019504	CHD1L	97	76.180	Dasypus_novemcinctus
ENSPSIG00000012595	CHD1L	98	70.680	ENSDORG00000013555	Chd1l	97	71.364	Dipodomys_ordii
ENSPSIG00000012595	CHD1L	88	70.536	ENSETEG00000008445	CHD1L	87	71.818	Echinops_telfairi
ENSPSIG00000012595	CHD1L	68	53.086	ENSEBUG00000005791	chd1l	78	72.000	Eptatretus_burgeri
ENSPSIG00000012595	CHD1L	98	75.850	ENSEASG00005007364	CHD1L	99	78.025	Equus_asinus_asinus
ENSPSIG00000012595	CHD1L	98	75.964	ENSECAG00000008915	CHD1L	99	78.148	Equus_caballus
ENSPSIG00000012595	CHD1L	94	56.134	ENSELUG00000016844	chd1l	82	56.250	Esox_lucius
ENSPSIG00000012595	CHD1L	97	75.515	ENSFCAG00000007777	CHD1L	97	75.830	Felis_catus
ENSPSIG00000012595	CHD1L	99	80.449	ENSFALG00000006087	CHD1L	97	81.214	Ficedula_albicollis
ENSPSIG00000012595	CHD1L	93	76.512	ENSFDAG00000012431	CHD1L	98	76.631	Fukomys_damarensis
ENSPSIG00000012595	CHD1L	96	63.417	ENSFHEG00000012420	chd1l	85	64.713	Fundulus_heteroclitus
ENSPSIG00000012595	CHD1L	98	80.656	ENSGALG00000015038	CHD1L	98	79.888	Gallus_gallus
ENSPSIG00000012595	CHD1L	97	63.801	ENSGAFG00000018198	chd1l	97	63.046	Gambusia_affinis
ENSPSIG00000012595	CHD1L	57	65.815	ENSGACG00000014042	chd1l	97	65.815	Gasterosteus_aculeatus
ENSPSIG00000012595	CHD1L	96	92.227	ENSGAGG00000014432	CHD1L	99	92.227	Gopherus_agassizii
ENSPSIG00000012595	CHD1L	95	76.905	ENSGGOG00000001067	CHD1L	95	76.995	Gorilla_gorilla
ENSPSIG00000012595	CHD1L	96	64.269	ENSHBUG00000007464	chd1l	96	65.035	Haplochromis_burtoni
ENSPSIG00000012595	CHD1L	95	75.818	ENSHGLG00000008933	CHD1L	95	75.935	Heterocephalus_glaber_female
ENSPSIG00000012595	CHD1L	93	74.526	ENSHGLG00100007155	CHD1L	98	74.496	Heterocephalus_glaber_male
ENSPSIG00000012595	CHD1L	93	64.124	ENSHCOG00000012787	chd1l	92	64.124	Hippocampus_comes
ENSPSIG00000012595	CHD1L	99	60.806	ENSIPUG00000022617	chd1l	86	60.775	Ictalurus_punctatus
ENSPSIG00000012595	CHD1L	96	68.571	ENSSTOG00000007032	CHD1L	95	69.347	Ictidomys_tridecemlineatus
ENSPSIG00000012595	CHD1L	99	61.344	ENSKMAG00000014358	chd1l	86	63.740	Kryptolebias_marmoratus
ENSPSIG00000012595	CHD1L	96	62.670	ENSLBEG00000023845	chd1l	96	64.571	Labrus_bergylta
ENSPSIG00000012595	CHD1L	95	66.323	ENSLACG00000006262	CHD1L	85	66.322	Latimeria_chalumnae
ENSPSIG00000012595	CHD1L	96	69.540	ENSLOCG00000010574	chd1l	89	68.304	Lepisosteus_oculatus
ENSPSIG00000012595	CHD1L	95	75.233	ENSLAFG00000018136	CHD1L	99	76.061	Loxodonta_africana
ENSPSIG00000012595	CHD1L	93	76.631	ENSMFAG00000043562	CHD1L	98	77.956	Macaca_fascicularis
ENSPSIG00000012595	CHD1L	96	76.552	ENSMMUG00000009024	CHD1L	96	76.464	Macaca_mulatta
ENSPSIG00000012595	CHD1L	96	76.552	ENSMNEG00000039905	CHD1L	96	76.464	Macaca_nemestrina
ENSPSIG00000012595	CHD1L	96	76.782	ENSMLEG00000030900	CHD1L	96	76.693	Mandrillus_leucophaeus
ENSPSIG00000012595	CHD1L	97	63.110	ENSMAMG00000012822	chd1l	99	61.812	Mastacembelus_armatus
ENSPSIG00000012595	CHD1L	96	64.498	ENSMZEG00005020830	chd1l	86	65.228	Maylandia_zebra
ENSPSIG00000012595	CHD1L	95	79.953	ENSMGAG00000014304	CHD1L	99	79.559	Meleagris_gallopavo
ENSPSIG00000012595	CHD1L	97	76.403	ENSMICG00000002497	CHD1L	97	76.491	Microcebus_murinus
ENSPSIG00000012595	CHD1L	96	75.543	ENSMOCG00000006305	Chd1l	98	74.717	Microtus_ochrogaster
ENSPSIG00000012595	CHD1L	94	63.189	ENSMMOG00000005964	chd1l	89	63.306	Mola_mola
ENSPSIG00000012595	CHD1L	99	75.673	ENSMODG00000018717	CHD1L	98	76.571	Monodelphis_domestica
ENSPSIG00000012595	CHD1L	96	63.470	ENSMALG00000014675	chd1l	84	64.795	Monopterus_albus
ENSPSIG00000012595	CHD1L	99	73.348	MGP_CAROLIEiJ_G0025401	Chd1l	98	74.230	Mus_caroli
ENSPSIG00000012595	CHD1L	97	74.292	ENSMUSG00000028089	Chd1l	98	74.292	Mus_musculus
ENSPSIG00000012595	CHD1L	99	73.513	MGP_PahariEiJ_G0026845	Chd1l	98	74.371	Mus_pahari
ENSPSIG00000012595	CHD1L	97	74.543	MGP_SPRETEiJ_G0026347	Chd1l	98	74.543	Mus_spretus
ENSPSIG00000012595	CHD1L	98	75.932	ENSMPUG00000000615	CHD1L	98	75.561	Mustela_putorius_furo
ENSPSIG00000012595	CHD1L	95	75.669	ENSMLUG00000007573	CHD1L	96	74.572	Myotis_lucifugus
ENSPSIG00000012595	CHD1L	96	70.205	ENSNGAG00000000908	Chd1l	97	71.013	Nannospalax_galili
ENSPSIG00000012595	CHD1L	95	62.227	ENSNBRG00000006021	chd1l	92	63.011	Neolamprologus_brichardi
ENSPSIG00000012595	CHD1L	97	75.402	ENSNLEG00000000179	CHD1L	96	75.489	Nomascus_leucogenys
ENSPSIG00000012595	CHD1L	94	65.962	ENSOPRG00000006973	CHD1L	99	66.548	Ochotona_princeps
ENSPSIG00000012595	CHD1L	95	72.569	ENSODEG00000002494	CHD1L	96	72.706	Octodon_degus
ENSPSIG00000012595	CHD1L	96	64.560	ENSONIG00000003183	chd1l	87	65.578	Oreochromis_niloticus
ENSPSIG00000012595	CHD1L	85	72.251	ENSOANG00000003068	CHD1L	93	73.930	Ornithorhynchus_anatinus
ENSPSIG00000012595	CHD1L	97	71.429	ENSOCUG00000009336	CHD1L	96	71.591	Oryctolagus_cuniculus
ENSPSIG00000012595	CHD1L	98	62.304	ENSORLG00000003673	chd1l	95	63.574	Oryzias_latipes
ENSPSIG00000012595	CHD1L	96	62.600	ENSORLG00020005123	chd1l	99	62.606	Oryzias_latipes_hni
ENSPSIG00000012595	CHD1L	99	61.641	ENSORLG00015001680	chd1l	98	63.387	Oryzias_latipes_hsok
ENSPSIG00000012595	CHD1L	77	60.465	ENSOMEG00000006109	chd1l	80	63.705	Oryzias_melastigma
ENSPSIG00000012595	CHD1L	98	74.066	ENSOGAG00000008775	CHD1L	97	74.570	Otolemur_garnettii
ENSPSIG00000012595	CHD1L	97	75.716	ENSOARG00000020547	CHD1L	98	77.024	Ovis_aries
ENSPSIG00000012595	CHD1L	94	76.777	ENSPPAG00000039193	CHD1L	98	78.025	Pan_paniscus
ENSPSIG00000012595	CHD1L	97	75.799	ENSPPRG00000010258	CHD1L	97	75.973	Panthera_pardus
ENSPSIG00000012595	CHD1L	95	77.140	ENSPTRG00000001220	CHD1L	95	77.230	Pan_troglodytes
ENSPSIG00000012595	CHD1L	94	77.843	ENSPANG00000009170	CHD1L	96	76.579	Papio_anubis
ENSPSIG00000012595	CHD1L	99	62.416	ENSPKIG00000022166	chd1l	97	62.185	Paramormyrops_kingsleyae
ENSPSIG00000012595	CHD1L	95	73.210	ENSPEMG00000013528	Chd1l	95	73.264	Peromyscus_maniculatus_bairdii
ENSPSIG00000012595	CHD1L	91	76.370	ENSPCIG00000030409	CHD1L	98	77.009	Phascolarctos_cinereus
ENSPSIG00000012595	CHD1L	97	63.398	ENSPFOG00000015948	chd1l	84	64.630	Poecilia_formosa
ENSPSIG00000012595	CHD1L	97	63.575	ENSPLAG00000015145	chd1l	96	64.228	Poecilia_latipinna
ENSPSIG00000012595	CHD1L	97	63.039	ENSPMEG00000008720	chd1l	89	64.452	Poecilia_mexicana
ENSPSIG00000012595	CHD1L	94	63.753	ENSPREG00000017885	chd1l	96	63.753	Poecilia_reticulata
ENSPSIG00000012595	CHD1L	97	76.667	ENSPPYG00000000946	CHD1L	96	76.755	Pongo_abelii
ENSPSIG00000012595	CHD1L	98	65.834	ENSPCAG00000005959	CHD1L	97	66.475	Procavia_capensis
ENSPSIG00000012595	CHD1L	94	70.401	ENSPVAG00000006084	CHD1L	99	70.714	Pteropus_vampyrus
ENSPSIG00000012595	CHD1L	94	65.152	ENSPNYG00000013001	chd1l	95	65.152	Pundamilia_nyererei
ENSPSIG00000012595	CHD1L	95	65.222	ENSPNAG00000011881	chd1l	83	65.452	Pygocentrus_nattereri
ENSPSIG00000012595	CHD1L	98	73.913	ENSRNOG00000017669	Chd1l	97	75.142	Rattus_norvegicus
ENSPSIG00000012595	CHD1L	96	75.660	ENSRBIG00000041272	CHD1L	96	75.660	Rhinopithecus_bieti
ENSPSIG00000012595	CHD1L	96	75.463	ENSRROG00000041354	CHD1L	97	75.404	Rhinopithecus_roxellana
ENSPSIG00000012595	CHD1L	97	73.280	ENSSHAG00000017395	CHD1L	99	72.799	Sarcophilus_harrisii
ENSPSIG00000012595	CHD1L	95	67.135	ENSSFOG00015003649	chd1l	98	63.770	Scleropages_formosus
ENSPSIG00000012595	CHD1L	97	60.957	ENSSMAG00000019377	chd1l	95	61.601	Scophthalmus_maximus
ENSPSIG00000012595	CHD1L	96	63.048	ENSSDUG00000019831	chd1l	94	64.685	Seriola_dumerili
ENSPSIG00000012595	CHD1L	98	61.521	ENSSLDG00000012714	chd1l	98	62.626	Seriola_lalandi_dorsalis
ENSPSIG00000012595	CHD1L	99	81.828	ENSSPUG00000016865	CHD1L	98	82.394	Sphenodon_punctatus
ENSPSIG00000012595	CHD1L	94	65.029	ENSSPAG00000017653	chd1l	91	64.450	Stegastes_partitus
ENSPSIG00000012595	CHD1L	97	73.425	ENSSSCG00000006701	CHD1L	98	73.394	Sus_scrofa
ENSPSIG00000012595	CHD1L	95	82.415	ENSTGUG00000013392	-	98	82.767	Taeniopygia_guttata
ENSPSIG00000012595	CHD1L	94	59.412	ENSTNIG00000004902	chd1l	99	59.412	Tetraodon_nigroviridis
ENSPSIG00000012595	CHD1L	95	72.398	ENSTTRG00000011711	CHD1L	98	73.421	Tursiops_truncatus
ENSPSIG00000012595	CHD1L	98	74.887	ENSUAMG00000021991	CHD1L	97	75.515	Ursus_americanus
ENSPSIG00000012595	CHD1L	98	74.661	ENSUMAG00000009733	CHD1L	96	76.259	Ursus_maritimus
ENSPSIG00000012595	CHD1L	97	75.198	ENSVVUG00000007316	CHD1L	93	75.775	Vulpes_vulpes
ENSPSIG00000012595	CHD1L	96	62.428	ENSXCOG00000008336	chd1l	84	63.232	Xiphophorus_couchianus
ENSPSIG00000012595	CHD1L	96	64.948	ENSXMAG00000015898	chd1l	96	62.130	Xiphophorus_maculatus