EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012698 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 8567 bases
Position: chrJH206625.1:410373-418939
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014177	GTP_EFTU	PF00009.27	5e-07	1	1
ENSPSIP00000014177	MMR_HSR1	PF01926.23	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014243	-	513	-	ENSPSIP00000014177	171 (aa)	-	K7G1L6

Gene Model

Click here to download ENSPSIG00000012698's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012698's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012698	-	95	34.731	ENSPSIG00000003221	RERG	80	34.731
ENSPSIG00000012698	-	89	37.908	ENSPSIG00000003078	RAB30	74	37.908
ENSPSIG00000012698	-	96	34.756	ENSPSIG00000013051	RAB25	76	34.756
ENSPSIG00000012698	-	87	31.757	ENSPSIG00000015579	RAB23	68	34.356
ENSPSIG00000012698	-	93	34.356	ENSPSIG00000010242	-	63	34.356
ENSPSIG00000012698	-	89	38.562	ENSPSIG00000013143	-	70	38.562
ENSPSIG00000012698	-	88	36.000	ENSPSIG00000011930	RAB11A	69	36.000
ENSPSIG00000012698	-	96	33.728	ENSPSIG00000001871	RAB9B	83	33.728
ENSPSIG00000012698	-	98	58.084	ENSPSIG00000008757	-	85	58.084
ENSPSIG00000012698	-	95	33.939	ENSPSIG00000016995	RAB17	68	33.939
ENSPSIG00000012698	-	95	33.333	ENSPSIG00000011514	RAB7A	80	33.333
ENSPSIG00000012698	-	89	33.974	ENSPSIG00000006831	RAB42	68	33.974
ENSPSIG00000012698	-	96	34.756	ENSPSIG00000003919	RAB14	75	34.756
ENSPSIG00000012698	-	96	37.195	ENSPSIG00000011994	RAB2A	76	37.195
ENSPSIG00000012698	-	90	56.129	ENSPSIG00000002522	-	98	56.129
ENSPSIG00000012698	-	96	35.976	ENSPSIG00000008028	RAB1A	79	35.976
ENSPSIG00000012698	-	95	30.909	ENSPSIG00000015077	-	85	30.909
ENSPSIG00000012698	-	96	33.136	ENSPSIG00000000469	RAB9A	83	33.136
ENSPSIG00000012698	-	95	33.742	ENSPSIG00000009545	RAB36	61	33.742
ENSPSIG00000012698	-	96	34.545	ENSPSIG00000009912	RAB22A	84	34.545
ENSPSIG00000012698	-	94	34.545	ENSPSIG00000003388	RAB7B	81	34.545
ENSPSIG00000012698	-	89	37.013	ENSPSIG00000006606	-	76	37.013
ENSPSIG00000012698	-	95	35.758	ENSPSIG00000009419	RAB39B	77	35.758
ENSPSIG00000012698	-	96	34.545	ENSPSIG00000009095	RAB31	84	34.545
ENSPSIG00000012698	-	95	36.810	ENSPSIG00000007157	RAB5A	75	36.810
ENSPSIG00000012698	-	86	31.544	ENSPSIG00000009592	MRAS	70	31.544

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012698	-	99	50.292	WBGene00007067	4R79.2	55	50.292	Caenorhabditis_elegans
ENSPSIG00000012698	-	96	55.152	ENSGMOG00000017644	si:ch211-247i17.1	94	55.152	Gadus_morhua
ENSPSIG00000012698	-	96	55.758	ENSGACG00000005397	si:ch211-247i17.1	94	55.758	Gasterosteus_aculeatus
ENSPSIG00000012698	-	100	81.287	ENSMGAG00000009012	-	99	81.287	Meleagris_gallopavo
ENSPSIG00000012698	-	100	84.211	ENSTGUG00000009776	-	98	84.211	Taeniopygia_guttata
ENSPSIG00000012698	-	98	55.030	ENSTNIG00000001043	si:ch211-247i17.1	83	55.030	Tetraodon_nigroviridis
ENSPSIG00000012698	-	61	53.333	ENSXMAG00000003735	si:ch211-247i17.1	88	53.333	Xiphophorus_maculatus