EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012791 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 19645 bases
Position: chrJH207983.1:318254-337898
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014322	APOBEC_N	PF08210.11	2.8e-51	1	2
ENSPSIP00000014322	APOBEC_N	PF08210.11	2.8e-51	2	2
ENSPSIP00000014322	APOBEC_C	PF05240.14	4.6e-41	1	2
ENSPSIP00000014322	APOBEC_C	PF05240.14	4.6e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014390	-	954	-	ENSPSIP00000014322	318 (aa)	-	K7G211

Gene Model

Click here to download ENSPSIG00000012791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012791	-	71	95.098	ENSPSIG00000012568	-	57	95.098
ENSPSIG00000012791	-	80	31.373	ENSPSIG00000013480	APOBEC2	61	31.373
ENSPSIG00000012791	-	64	43.182	ENSPSIG00000013283	AICDA	60	43.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012791	-	75	50.450	ENSG00000111701	APOBEC1	57	50.450	Homo_sapiens
ENSPSIG00000012791	-	75	53.636	ENSAMEG00000007098	APOBEC1	57	53.636	Ailuropoda_melanoleuca
ENSPSIG00000012791	-	66	51.852	ENSACAG00000028578	-	70	51.852	Anolis_carolinensis
ENSPSIG00000012791	-	75	48.624	ENSANAG00000027743	APOBEC1	54	48.624	Aotus_nancymaae
ENSPSIG00000012791	-	72	48.624	ENSBTAG00000014683	APOBEC1	53	48.624	Bos_taurus
ENSPSIG00000012791	-	75	48.624	ENSCJAG00000005398	APOBEC1	61	48.624	Callithrix_jacchus
ENSPSIG00000012791	-	75	50.450	ENSCAFG00000013901	APOBEC1	57	50.450	Canis_familiaris
ENSPSIG00000012791	-	75	50.450	ENSCAFG00020003511	APOBEC1	56	50.450	Canis_lupus_dingo
ENSPSIG00000012791	-	73	48.624	ENSCHIG00000011898	APOBEC1	57	48.624	Capra_hircus
ENSPSIG00000012791	-	52	56.790	ENSTSYG00000029141	APOBEC1	62	56.790	Carlito_syrichta
ENSPSIG00000012791	-	72	50.909	ENSCAPG00000015882	-	59	50.909	Cavia_aperea
ENSPSIG00000012791	-	72	50.000	ENSCPOG00000033068	APOBEC1	53	50.000	Cavia_porcellus
ENSPSIG00000012791	-	75	50.459	ENSCCAG00000022258	APOBEC1	57	50.459	Cebus_capucinus
ENSPSIG00000012791	-	76	49.541	ENSCATG00000021613	APOBEC1	56	49.541	Cercocebus_atys
ENSPSIG00000012791	-	72	50.833	ENSCLAG00000014645	APOBEC1	55	50.833	Chinchilla_lanigera
ENSPSIG00000012791	-	75	49.541	ENSCSAG00000009817	APOBEC1	71	49.541	Chlorocebus_sabaeus
ENSPSIG00000012791	-	70	78.431	ENSCPBG00000017398	-	57	78.431	Chrysemys_picta_bellii
ENSPSIG00000012791	-	72	55.200	ENSCPBG00000014331	-	55	55.085	Chrysemys_picta_bellii
ENSPSIG00000012791	-	69	52.846	ENSCPBG00000014335	-	52	52.846	Chrysemys_picta_bellii
ENSPSIG00000012791	-	70	78.431	ENSCPBG00000014327	-	51	62.745	Chrysemys_picta_bellii
ENSPSIG00000012791	-	69	82.178	ENSCPBG00000014328	-	56	82.178	Chrysemys_picta_bellii
ENSPSIG00000012791	-	75	48.624	ENSCANG00000038359	APOBEC1	59	48.624	Colobus_angolensis_palliatus
ENSPSIG00000012791	-	71	50.000	ENSCGRG00001011130	Apobec1	55	50.000	Cricetulus_griseus_chok1gshd
ENSPSIG00000012791	-	71	50.000	ENSCGRG00000008644	Apobec1	55	50.000	Cricetulus_griseus_crigri
ENSPSIG00000012791	-	71	48.649	ENSDNOG00000010926	APOBEC1	53	48.649	Dasypus_novemcinctus
ENSPSIG00000012791	-	69	46.296	ENSDORG00000023717	Apobec1	59	46.296	Dipodomys_ordii
ENSPSIG00000012791	-	72	52.727	ENSETEG00000004867	APOBEC1	54	52.727	Echinops_telfairi
ENSPSIG00000012791	-	72	50.459	ENSEASG00005015951	APOBEC1	53	50.459	Equus_asinus_asinus
ENSPSIG00000012791	-	72	50.459	ENSECAG00000017163	APOBEC1	66	50.459	Equus_caballus
ENSPSIG00000012791	-	71	48.333	ENSEEUG00000009112	-	56	48.333	Erinaceus_europaeus
ENSPSIG00000012791	-	75	49.550	ENSFCAG00000009350	APOBEC1	57	49.550	Felis_catus
ENSPSIG00000012791	-	99	37.037	ENSFALG00000007257	-	88	37.037	Ficedula_albicollis
ENSPSIG00000012791	-	68	44.860	ENSFDAG00000018470	APOBEC1	61	44.860	Fukomys_damarensis
ENSPSIG00000012791	-	69	76.000	ENSGAGG00000004947	-	65	76.000	Gopherus_agassizii
ENSPSIG00000012791	-	70	72.816	ENSGAGG00000021744	-	50	72.816	Gopherus_agassizii
ENSPSIG00000012791	-	99	40.439	ENSGAGG00000011837	-	84	40.439	Gopherus_agassizii
ENSPSIG00000012791	-	69	64.948	ENSGAGG00000021745	-	51	64.078	Gopherus_agassizii
ENSPSIG00000012791	-	74	48.454	ENSHGLG00000001495	APOBEC1	59	48.454	Heterocephalus_glaber_female
ENSPSIG00000012791	-	74	48.454	ENSHGLG00100002187	APOBEC1	59	48.454	Heterocephalus_glaber_male
ENSPSIG00000012791	-	72	45.283	ENSSTOG00000021971	APOBEC1	74	45.283	Ictidomys_tridecemlineatus
ENSPSIG00000012791	-	72	51.786	ENSJJAG00000022108	Apobec1	55	51.786	Jaculus_jaculus
ENSPSIG00000012791	-	71	49.167	ENSLAFG00000030837	APOBEC1	57	49.167	Loxodonta_africana
ENSPSIG00000012791	-	76	49.541	ENSMFAG00000000277	APOBEC1	73	49.541	Macaca_fascicularis
ENSPSIG00000012791	-	76	48.649	ENSMNEG00000029670	APOBEC1	59	48.649	Macaca_nemestrina
ENSPSIG00000012791	-	76	49.541	ENSMLEG00000036301	APOBEC1	59	49.541	Mandrillus_leucophaeus
ENSPSIG00000012791	-	71	50.926	ENSMAUG00000022167	Apobec1	56	50.926	Mesocricetus_auratus
ENSPSIG00000012791	-	72	48.182	ENSMICG00000043645	APOBEC1	55	48.182	Microcebus_murinus
ENSPSIG00000012791	-	71	48.333	ENSMODG00000018004	APOBEC1	54	48.333	Monodelphis_domestica
ENSPSIG00000012791	-	72	48.624	ENSMUSG00000040613	Apobec1	50	53.704	Mus_musculus
ENSPSIG00000012791	-	72	48.624	MGP_PahariEiJ_G0022580	-	50	53.704	Mus_pahari
ENSPSIG00000012791	-	72	48.624	MGP_SPRETEiJ_G0029857	Apobec1	50	53.704	Mus_spretus
ENSPSIG00000012791	-	75	50.000	ENSMPUG00000017532	APOBEC1	57	50.000	Mustela_putorius_furo
ENSPSIG00000012791	-	71	47.500	ENSNGAG00000022607	Apobec1	55	47.500	Nannospalax_galili
ENSPSIG00000012791	-	66	55.238	ENSNLEG00000005342	APOBEC1	53	55.238	Nomascus_leucogenys
ENSPSIG00000012791	-	71	45.045	ENSMEUG00000013406	APOBEC1	53	45.045	Notamacropus_eugenii
ENSPSIG00000012791	-	71	45.872	ENSOPRG00000009508	-	68	45.872	Ochotona_princeps
ENSPSIG00000012791	-	74	48.077	ENSOCUG00000025736	APOBEC1	51	48.077	Oryctolagus_cuniculus
ENSPSIG00000012791	-	70	48.571	ENSOGAG00000026415	APOBEC1	53	48.571	Otolemur_garnettii
ENSPSIG00000012791	-	73	48.624	ENSOARG00000002072	APOBEC1	57	48.624	Ovis_aries
ENSPSIG00000012791	-	65	55.319	ENSPPAG00000027657	APOBEC1	55	55.319	Pan_paniscus
ENSPSIG00000012791	-	75	48.649	ENSPPRG00000012182	APOBEC1	57	48.649	Panthera_pardus
ENSPSIG00000012791	-	75	48.649	ENSPTIG00000020280	APOBEC1	57	48.649	Panthera_tigris_altaica
ENSPSIG00000012791	-	75	50.450	ENSPTRG00000004614	APOBEC1	57	50.450	Pan_troglodytes
ENSPSIG00000012791	-	76	49.541	ENSPANG00000021027	APOBEC1	59	49.541	Papio_anubis
ENSPSIG00000012791	-	68	53.608	ENSPEMG00000023841	Apobec1	55	53.608	Peromyscus_maniculatus_bairdii
ENSPSIG00000012791	-	71	47.500	ENSPCIG00000023973	APOBEC1	53	47.500	Phascolarctos_cinereus
ENSPSIG00000012791	-	75	50.450	ENSPPYG00000004228	APOBEC1	54	50.450	Pongo_abelii
ENSPSIG00000012791	-	71	48.333	ENSPCAG00000008733	APOBEC1	67	48.333	Procavia_capensis
ENSPSIG00000012791	-	72	50.000	ENSPCOG00000013957	APOBEC1	56	50.000	Propithecus_coquereli
ENSPSIG00000012791	-	71	45.833	ENSRNOG00000015411	Apobec1	55	45.833	Rattus_norvegicus
ENSPSIG00000012791	-	75	47.706	ENSRBIG00000031161	APOBEC1	57	47.706	Rhinopithecus_bieti
ENSPSIG00000012791	-	75	47.706	ENSRROG00000033576	APOBEC1	71	47.706	Rhinopithecus_roxellana
ENSPSIG00000012791	-	75	48.624	ENSSBOG00000030587	APOBEC1	76	48.624	Saimiri_boliviensis_boliviensis
ENSPSIG00000012791	-	71	48.649	ENSSHAG00000008925	APOBEC1	55	48.649	Sarcophilus_harrisii
ENSPSIG00000012791	-	68	55.670	ENSSARG00000000032	-	74	55.670	Sorex_araneus
ENSPSIG00000012791	-	52	55.172	ENSSARG00000011972	-	66	55.172	Sorex_araneus
ENSPSIG00000012791	-	72	52.294	ENSSSCG00000000668	APOBEC1	53	52.294	Sus_scrofa
ENSPSIG00000012791	-	57	58.537	ENSTGUG00000013118	-	68	58.537	Taeniopygia_guttata
ENSPSIG00000012791	-	73	49.541	ENSTBEG00000010043	APOBEC1	53	49.541	Tupaia_belangeri
ENSPSIG00000012791	-	66	49.485	ENSTTRG00000014015	APOBEC1	67	49.485	Tursiops_truncatus
ENSPSIG00000012791	-	75	52.252	ENSUAMG00000011636	APOBEC1	55	52.252	Ursus_americanus
ENSPSIG00000012791	-	75	52.252	ENSUMAG00000016552	APOBEC1	55	52.252	Ursus_maritimus
ENSPSIG00000012791	-	71	47.899	ENSVPAG00000001343	APOBEC1	53	47.899	Vicugna_pacos
ENSPSIG00000012791	-	75	50.450	ENSVVUG00000010522	APOBEC1	57	50.450	Vulpes_vulpes