EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012803 (Gene tree)
Gene ID: -
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 22641 bases
Position: chrJH209995.1:26413-49053
Accession: 102458538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014277	PRP21_like_P	PF12230.8	1.9e-51	1	1
ENSPSIP00000014277	Surp	PF01805.20	2.8e-46	1	2
ENSPSIP00000014277	Surp	PF01805.20	2.8e-46	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014344	SF3A1-201	2562	XM_006127943	ENSPSIP00000014277	648 (aa)	XP_006128005	K7G1W6

Gene Model

Click here to download ENSPSIG00000012803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012803's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012803	SF3A1	96	94.505	ENSG00000099995	SF3A1	83	94.505	Homo_sapiens
ENSPSIG00000012803	SF3A1	99	91.209	ENSAPOG00000020465	sf3a1	82	91.209	Acanthochromis_polyacanthus
ENSPSIG00000012803	SF3A1	96	94.162	ENSAMEG00000007737	SF3A1	83	93.407	Ailuropoda_melanoleuca
ENSPSIG00000012803	SF3A1	98	90.110	ENSACIG00000020672	sf3a1	82	90.110	Amphilophus_citrinellus
ENSPSIG00000012803	SF3A1	99	91.209	ENSAOCG00000003060	sf3a1	82	91.209	Amphiprion_ocellaris
ENSPSIG00000012803	SF3A1	99	91.209	ENSAPEG00000010735	sf3a1	82	91.209	Amphiprion_percula
ENSPSIG00000012803	SF3A1	99	91.209	ENSATEG00000021201	sf3a1	83	91.209	Anabas_testudineus
ENSPSIG00000012803	SF3A1	93	97.670	ENSAPLG00000009057	SF3A1	85	94.505	Anas_platyrhynchos
ENSPSIG00000012803	SF3A1	96	94.505	ENSACAG00000009415	SF3A1	77	94.505	Anolis_carolinensis
ENSPSIG00000012803	SF3A1	96	94.329	ENSANAG00000032045	SF3A1	83	93.407	Aotus_nancymaae
ENSPSIG00000012803	SF3A1	98	89.011	ENSACLG00000012622	sf3a1	82	89.011	Astatotilapia_calliptera
ENSPSIG00000012803	SF3A1	99	92.308	ENSAMXG00000005382	sf3a1	83	92.308	Astyanax_mexicanus
ENSPSIG00000012803	SF3A1	96	94.505	ENSBTAG00000003390	SF3A1	83	94.505	Bos_taurus
ENSPSIG00000012803	SF3A1	99	40.459	WBGene00004188	prp-21	99	39.105	Caenorhabditis_elegans
ENSPSIG00000012803	SF3A1	96	94.505	ENSCJAG00000010370	SF3A1	83	94.505	Callithrix_jacchus
ENSPSIG00000012803	SF3A1	96	94.162	ENSCAFG00000012559	SF3A1	83	93.407	Canis_familiaris
ENSPSIG00000012803	SF3A1	96	94.162	ENSCAFG00020000838	SF3A1	83	93.407	Canis_lupus_dingo
ENSPSIG00000012803	SF3A1	96	94.505	ENSCHIG00000018642	SF3A1	83	94.505	Capra_hircus
ENSPSIG00000012803	SF3A1	96	94.162	ENSTSYG00000004739	SF3A1	83	93.407	Carlito_syrichta
ENSPSIG00000012803	SF3A1	92	75.940	ENSCAPG00000015414	SF3A1	82	73.462	Cavia_aperea
ENSPSIG00000012803	SF3A1	96	94.915	ENSCPOG00000014589	SF3A1	82	94.505	Cavia_porcellus
ENSPSIG00000012803	SF3A1	96	94.329	ENSCCAG00000032006	SF3A1	83	93.407	Cebus_capucinus
ENSPSIG00000012803	SF3A1	96	94.505	ENSCATG00000029241	SF3A1	83	94.505	Cercocebus_atys
ENSPSIG00000012803	SF3A1	96	94.505	ENSCLAG00000006508	SF3A1	83	94.505	Chinchilla_lanigera
ENSPSIG00000012803	SF3A1	96	94.505	ENSCSAG00000009470	SF3A1	83	94.505	Chlorocebus_sabaeus
ENSPSIG00000012803	SF3A1	67	94.286	ENSCHOG00000005201	SF3A1	62	94.286	Choloepus_hoffmanni
ENSPSIG00000012803	SF3A1	96	98.488	ENSCPBG00000007595	SF3A1	83	96.703	Chrysemys_picta_bellii
ENSPSIG00000012803	SF3A1	96	69.565	ENSCING00000008526	-	78	69.565	Ciona_intestinalis
ENSPSIG00000012803	SF3A1	96	69.565	ENSCSAVG00000005608	-	88	69.565	Ciona_savignyi
ENSPSIG00000012803	SF3A1	96	94.505	ENSCANG00000033564	SF3A1	83	94.505	Colobus_angolensis_palliatus
ENSPSIG00000012803	SF3A1	94	95.385	ENSCGRG00001008933	Sf3a1	83	92.308	Cricetulus_griseus_chok1gshd
ENSPSIG00000012803	SF3A1	94	95.385	ENSCGRG00000006127	Sf3a1	83	92.308	Cricetulus_griseus_crigri
ENSPSIG00000012803	SF3A1	99	92.308	ENSCSEG00000010792	sf3a1	84	92.308	Cynoglossus_semilaevis
ENSPSIG00000012803	SF3A1	99	90.110	ENSCVAG00000004560	sf3a1	79	90.110	Cyprinodon_variegatus
ENSPSIG00000012803	SF3A1	99	94.505	ENSDARG00000041887	sf3a1	90	89.375	Danio_rerio
ENSPSIG00000012803	SF3A1	99	94.505	ENSDNOG00000010629	SF3A1	82	94.505	Dasypus_novemcinctus
ENSPSIG00000012803	SF3A1	96	94.727	ENSDORG00000005613	Sf3a1	83	93.407	Dipodomys_ordii
ENSPSIG00000012803	SF3A1	91	61.959	FBgn0266917	Sf3a1	80	61.121	Drosophila_melanogaster
ENSPSIG00000012803	SF3A1	80	94.981	ENSETEG00000017194	SF3A1	79	91.171	Echinops_telfairi
ENSPSIG00000012803	SF3A1	99	66.450	ENSEBUG00000001285	sf3a1	78	84.615	Eptatretus_burgeri
ENSPSIG00000012803	SF3A1	96	94.528	ENSEASG00005010254	SF3A1	83	94.505	Equus_asinus_asinus
ENSPSIG00000012803	SF3A1	96	94.528	ENSECAG00000023962	SF3A1	83	94.505	Equus_caballus
ENSPSIG00000012803	SF3A1	89	95.082	ENSEEUG00000003159	SF3A1	83	95.082	Erinaceus_europaeus
ENSPSIG00000012803	SF3A1	99	90.110	ENSELUG00000022578	sf3a1	78	90.110	Esox_lucius
ENSPSIG00000012803	SF3A1	96	94.505	ENSFCAG00000011932	SF3A1	83	94.505	Felis_catus
ENSPSIG00000012803	SF3A1	93	96.693	ENSFALG00000006944	SF3A1	85	93.982	Ficedula_albicollis
ENSPSIG00000012803	SF3A1	96	94.505	ENSFDAG00000009560	SF3A1	83	94.505	Fukomys_damarensis
ENSPSIG00000012803	SF3A1	96	92.308	ENSFHEG00000010866	sf3a1	81	92.308	Fundulus_heteroclitus
ENSPSIG00000012803	SF3A1	99	92.308	ENSGMOG00000016024	sf3a1	80	92.308	Gadus_morhua
ENSPSIG00000012803	SF3A1	93	97.665	ENSGALG00000007937	SF3A1	83	94.505	Gallus_gallus
ENSPSIG00000012803	SF3A1	99	90.110	ENSGAFG00000009111	sf3a1	82	90.110	Gambusia_affinis
ENSPSIG00000012803	SF3A1	99	92.308	ENSGACG00000011893	sf3a1	92	80.450	Gasterosteus_aculeatus
ENSPSIG00000012803	SF3A1	91	98.299	ENSGAGG00000000762	SF3A1	82	98.276	Gopherus_agassizii
ENSPSIG00000012803	SF3A1	96	94.505	ENSGGOG00000012631	SF3A1	83	94.505	Gorilla_gorilla
ENSPSIG00000012803	SF3A1	98	89.011	ENSHBUG00000015795	sf3a1	82	89.011	Haplochromis_burtoni
ENSPSIG00000012803	SF3A1	96	94.505	ENSHGLG00000007907	SF3A1	83	94.505	Heterocephalus_glaber_female
ENSPSIG00000012803	SF3A1	96	94.505	ENSHGLG00100013799	SF3A1	83	94.505	Heterocephalus_glaber_male
ENSPSIG00000012803	SF3A1	98	89.011	ENSHCOG00000015423	sf3a1	82	89.011	Hippocampus_comes
ENSPSIG00000012803	SF3A1	99	93.407	ENSIPUG00000002470	sf3a1	80	93.407	Ictalurus_punctatus
ENSPSIG00000012803	SF3A1	96	94.539	ENSSTOG00000013892	SF3A1	83	94.505	Ictidomys_tridecemlineatus
ENSPSIG00000012803	SF3A1	96	94.518	ENSJJAG00000022566	Sf3a1	83	94.505	Jaculus_jaculus
ENSPSIG00000012803	SF3A1	98	93.407	ENSKMAG00000002400	sf3a1	78	93.407	Kryptolebias_marmoratus
ENSPSIG00000012803	SF3A1	99	91.209	ENSLBEG00000022974	sf3a1	80	91.209	Labrus_bergylta
ENSPSIG00000012803	SF3A1	95	93.407	ENSLACG00000003565	SF3A1	82	93.407	Latimeria_chalumnae
ENSPSIG00000012803	SF3A1	96	94.505	ENSLOCG00000008251	sf3a1	83	94.505	Lepisosteus_oculatus
ENSPSIG00000012803	SF3A1	96	94.162	ENSLAFG00000000448	SF3A1	83	93.407	Loxodonta_africana
ENSPSIG00000012803	SF3A1	98	72.500	ENSLAFG00000026032	-	76	72.500	Loxodonta_africana
ENSPSIG00000012803	SF3A1	96	94.505	ENSMFAG00000031979	SF3A1	83	94.505	Macaca_fascicularis
ENSPSIG00000012803	SF3A1	96	94.505	ENSMMUG00000005547	SF3A1	83	94.505	Macaca_mulatta
ENSPSIG00000012803	SF3A1	96	94.505	ENSMNEG00000037229	SF3A1	83	94.505	Macaca_nemestrina
ENSPSIG00000012803	SF3A1	96	94.505	ENSMLEG00000041908	SF3A1	83	94.505	Mandrillus_leucophaeus
ENSPSIG00000012803	SF3A1	98	91.209	ENSMAMG00000006460	sf3a1	80	91.209	Mastacembelus_armatus
ENSPSIG00000012803	SF3A1	98	89.011	ENSMZEG00005009633	sf3a1	82	89.011	Maylandia_zebra
ENSPSIG00000012803	SF3A1	93	97.665	ENSMGAG00000001330	SF3A1	85	94.505	Meleagris_gallopavo
ENSPSIG00000012803	SF3A1	90	92.308	ENSMAUG00000020317	Sf3a1	85	92.308	Mesocricetus_auratus
ENSPSIG00000012803	SF3A1	96	93.785	ENSMICG00000010038	SF3A1	83	93.407	Microcebus_murinus
ENSPSIG00000012803	SF3A1	96	94.329	ENSMOCG00000008438	Sf3a1	82	92.308	Microtus_ochrogaster
ENSPSIG00000012803	SF3A1	99	92.308	ENSMMOG00000015588	sf3a1	82	92.308	Mola_mola
ENSPSIG00000012803	SF3A1	95	95.604	ENSMODG00000009270	SF3A1	83	95.604	Monodelphis_domestica
ENSPSIG00000012803	SF3A1	98	92.308	ENSMALG00000000148	sf3a1	83	92.308	Monopterus_albus
ENSPSIG00000012803	SF3A1	96	93.762	MGP_CAROLIEiJ_G0016029	Sf3a1	83	92.308	Mus_caroli
ENSPSIG00000012803	SF3A1	96	93.762	ENSMUSG00000002129	Sf3a1	83	92.308	Mus_musculus
ENSPSIG00000012803	SF3A1	96	93.573	MGP_PahariEiJ_G0016862	Sf3a1	83	92.308	Mus_pahari
ENSPSIG00000012803	SF3A1	96	93.762	MGP_SPRETEiJ_G0016870	Sf3a1	83	92.308	Mus_spretus
ENSPSIG00000012803	SF3A1	96	94.350	ENSMPUG00000013144	SF3A1	83	93.407	Mustela_putorius_furo
ENSPSIG00000012803	SF3A1	96	94.539	ENSMLUG00000002139	SF3A1	83	94.505	Myotis_lucifugus
ENSPSIG00000012803	SF3A1	96	94.717	ENSNGAG00000016977	Sf3a1	83	94.505	Nannospalax_galili
ENSPSIG00000012803	SF3A1	98	89.011	ENSNBRG00000016642	sf3a1	81	89.011	Neolamprologus_brichardi
ENSPSIG00000012803	SF3A1	96	94.505	ENSNLEG00000003686	SF3A1	83	94.505	Nomascus_leucogenys
ENSPSIG00000012803	SF3A1	95	94.828	ENSMEUG00000008741	SF3A1	81	94.828	Notamacropus_eugenii
ENSPSIG00000012803	SF3A1	96	95.463	ENSOPRG00000016636	SF3A1	83	93.407	Ochotona_princeps
ENSPSIG00000012803	SF3A1	96	94.329	ENSODEG00000002571	SF3A1	83	93.407	Octodon_degus
ENSPSIG00000012803	SF3A1	98	89.011	ENSONIG00000010848	sf3a1	82	89.011	Oreochromis_niloticus
ENSPSIG00000012803	SF3A1	96	94.518	ENSOCUG00000007633	SF3A1	83	93.407	Oryctolagus_cuniculus
ENSPSIG00000012803	SF3A1	92	89.655	ENSORLG00000013050	sf3a1	86	89.655	Oryzias_latipes
ENSPSIG00000012803	SF3A1	94	89.655	ENSORLG00020003236	sf3a1	74	89.655	Oryzias_latipes_hni
ENSPSIG00000012803	SF3A1	97	91.209	ENSORLG00015017411	sf3a1	87	91.209	Oryzias_latipes_hsok
ENSPSIG00000012803	SF3A1	99	90.110	ENSOMEG00000013362	sf3a1	79	90.110	Oryzias_melastigma
ENSPSIG00000012803	SF3A1	96	93.785	ENSOGAG00000012931	SF3A1	83	93.407	Otolemur_garnettii
ENSPSIG00000012803	SF3A1	96	94.505	ENSOARG00000006849	SF3A1	83	94.505	Ovis_aries
ENSPSIG00000012803	SF3A1	96	94.505	ENSPPAG00000041790	SF3A1	83	94.505	Pan_paniscus
ENSPSIG00000012803	SF3A1	96	94.505	ENSPPRG00000004391	SF3A1	83	94.505	Panthera_pardus
ENSPSIG00000012803	SF3A1	96	94.350	ENSPTIG00000000844	SF3A1	85	93.407	Panthera_tigris_altaica
ENSPSIG00000012803	SF3A1	96	94.505	ENSPTRG00000014240	SF3A1	83	94.505	Pan_troglodytes
ENSPSIG00000012803	SF3A1	96	94.505	ENSPANG00000020772	SF3A1	83	94.505	Papio_anubis
ENSPSIG00000012803	SF3A1	98	90.110	ENSPMGG00000023096	sf3a1	85	90.110	Periophthalmus_magnuspinnatus
ENSPSIG00000012803	SF3A1	94	95.577	ENSPEMG00000009494	Sf3a1	83	92.308	Peromyscus_maniculatus_bairdii
ENSPSIG00000012803	SF3A1	79	80.702	ENSPMAG00000007139	-	88	80.455	Petromyzon_marinus
ENSPSIG00000012803	SF3A1	96	95.094	ENSPCIG00000022692	SF3A1	83	94.505	Phascolarctos_cinereus
ENSPSIG00000012803	SF3A1	94	91.209	ENSPFOG00000016768	sf3a1	78	91.209	Poecilia_formosa
ENSPSIG00000012803	SF3A1	99	91.209	ENSPLAG00000017268	sf3a1	82	91.209	Poecilia_latipinna
ENSPSIG00000012803	SF3A1	83	91.209	ENSPMEG00000019811	sf3a1	81	91.209	Poecilia_mexicana
ENSPSIG00000012803	SF3A1	99	91.209	ENSPREG00000010347	sf3a1	79	91.209	Poecilia_reticulata
ENSPSIG00000012803	SF3A1	96	94.505	ENSPPYG00000011707	SF3A1	83	94.505	Pongo_abelii
ENSPSIG00000012803	SF3A1	96	94.505	ENSPCOG00000026630	SF3A1	83	94.505	Propithecus_coquereli
ENSPSIG00000012803	SF3A1	92	94.505	ENSPVAG00000017719	SF3A1	80	94.505	Pteropus_vampyrus
ENSPSIG00000012803	SF3A1	98	89.011	ENSPNYG00000018706	sf3a1	82	89.011	Pundamilia_nyererei
ENSPSIG00000012803	SF3A1	99	93.407	ENSPNAG00000003721	sf3a1	79	93.407	Pygocentrus_nattereri
ENSPSIG00000012803	SF3A1	96	93.951	ENSRNOG00000005218	Sf3a1	83	92.308	Rattus_norvegicus
ENSPSIG00000012803	SF3A1	96	94.505	ENSRBIG00000032167	SF3A1	83	94.505	Rhinopithecus_bieti
ENSPSIG00000012803	SF3A1	96	94.505	ENSRROG00000044908	SF3A1	83	94.505	Rhinopithecus_roxellana
ENSPSIG00000012803	SF3A1	90	95.335	ENSSBOG00000021960	SF3A1	81	93.407	Saimiri_boliviensis_boliviensis
ENSPSIG00000012803	SF3A1	96	95.604	ENSSHAG00000003666	SF3A1	83	95.604	Sarcophilus_harrisii
ENSPSIG00000012803	SF3A1	99	91.209	ENSSFOG00015004579	sf3a1	79	91.209	Scleropages_formosus
ENSPSIG00000012803	SF3A1	100	90.110	ENSSMAG00000004275	sf3a1	79	90.110	Scophthalmus_maximus
ENSPSIG00000012803	SF3A1	99	91.209	ENSSDUG00000022219	sf3a1	82	91.209	Seriola_dumerili
ENSPSIG00000012803	SF3A1	99	91.209	ENSSLDG00000012642	sf3a1	82	91.209	Seriola_lalandi_dorsalis
ENSPSIG00000012803	SF3A1	96	94.505	ENSSARG00000005960	SF3A1	85	94.505	Sorex_araneus
ENSPSIG00000012803	SF3A1	94	96.538	ENSSPUG00000018863	SF3A1	82	95.604	Sphenodon_punctatus
ENSPSIG00000012803	SF3A1	99	91.209	ENSSPAG00000011856	sf3a1	82	91.209	Stegastes_partitus
ENSPSIG00000012803	SF3A1	96	94.505	ENSSSCG00000010002	SF3A1	83	94.505	Sus_scrofa
ENSPSIG00000012803	SF3A1	93	97.471	ENSTGUG00000010547	SF3A1	85	93.982	Taeniopygia_guttata
ENSPSIG00000012803	SF3A1	99	93.407	ENSTRUG00000006118	sf3a1	87	93.407	Takifugu_rubripes
ENSPSIG00000012803	SF3A1	57	89.474	ENSTNIG00000005713	sf3a1	71	92.308	Tetraodon_nigroviridis
ENSPSIG00000012803	SF3A1	91	98.246	ENSTBEG00000012771	SF3A1	78	98.246	Tupaia_belangeri
ENSPSIG00000012803	SF3A1	96	93.407	ENSTTRG00000001535	SF3A1	83	93.407	Tursiops_truncatus
ENSPSIG00000012803	SF3A1	95	94.162	ENSUAMG00000006750	SF3A1	82	90.845	Ursus_americanus
ENSPSIG00000012803	SF3A1	99	93.407	ENSUMAG00000016665	SF3A1	84	93.407	Ursus_maritimus
ENSPSIG00000012803	SF3A1	96	94.162	ENSVVUG00000003075	SF3A1	83	93.407	Vulpes_vulpes
ENSPSIG00000012803	SF3A1	97	92.308	ENSXETG00000016144	sf3a1	89	90.749	Xenopus_tropicalis
ENSPSIG00000012803	SF3A1	99	89.011	ENSXCOG00000015653	sf3a1	79	89.011	Xiphophorus_couchianus
ENSPSIG00000012803	SF3A1	99	89.011	ENSXMAG00000002753	sf3a1	79	89.011	Xiphophorus_maculatus