EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012807 (Gene tree)
Gene ID: 102461854
Gene Symbol: TSEN54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 14391 bases
Position: chrJH212636.1:1639394-1653784
Accession: 102461854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014280	tRNA_int_end_N2	PF12928.7	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014347	TSEN54-201	3463	XM_006136513	ENSPSIP00000014280	428 (aa)	-	K7G1W9

Gene Model

Click here to download ENSPSIG00000012807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012807	TSEN54	99	51.732	ENSG00000182173	TSEN54	100	75.000	Homo_sapiens
ENSPSIG00000012807	TSEN54	100	46.387	ENSAPOG00000009659	tsen54	99	46.387	Acanthochromis_polyacanthus
ENSPSIG00000012807	TSEN54	99	52.083	ENSAMEG00000009414	TSEN54	80	52.546	Ailuropoda_melanoleuca
ENSPSIG00000012807	TSEN54	100	45.921	ENSAOCG00000000152	tsen54	79	46.313	Amphiprion_ocellaris
ENSPSIG00000012807	TSEN54	100	45.688	ENSAPEG00000018931	tsen54	79	46.083	Amphiprion_percula
ENSPSIG00000012807	TSEN54	100	41.898	ENSATEG00000019860	tsen54	81	43.418	Anabas_testudineus
ENSPSIG00000012807	TSEN54	99	66.979	ENSAPLG00000009419	TSEN54	94	66.979	Anas_platyrhynchos
ENSPSIG00000012807	TSEN54	99	59.767	ENSACAG00000006714	TSEN54	81	59.907	Anolis_carolinensis
ENSPSIG00000012807	TSEN54	99	51.270	ENSANAG00000024061	TSEN54	80	52.546	Aotus_nancymaae
ENSPSIG00000012807	TSEN54	100	43.750	ENSACLG00000019800	tsen54	80	44.676	Astatotilapia_calliptera
ENSPSIG00000012807	TSEN54	100	46.853	ENSAMXG00000006546	tsen54	80	46.853	Astyanax_mexicanus
ENSPSIG00000012807	TSEN54	99	51.613	ENSBTAG00000000824	TSEN54	80	52.184	Bos_taurus
ENSPSIG00000012807	TSEN54	99	50.808	ENSCJAG00000014278	TSEN54	80	52.315	Callithrix_jacchus
ENSPSIG00000012807	TSEN54	99	50.926	ENSCAFG00000004798	TSEN54	80	52.315	Canis_familiaris
ENSPSIG00000012807	TSEN54	99	50.926	ENSCAFG00020000312	TSEN54	80	52.315	Canis_lupus_dingo
ENSPSIG00000012807	TSEN54	99	51.732	ENSCHIG00000019908	TSEN54	80	51.732	Capra_hircus
ENSPSIG00000012807	TSEN54	99	51.152	ENSTSYG00000037439	TSEN54	93	51.613	Carlito_syrichta
ENSPSIG00000012807	TSEN54	99	52.083	ENSCCAG00000036624	TSEN54	80	52.315	Cebus_capucinus
ENSPSIG00000012807	TSEN54	99	51.620	ENSCATG00000042877	TSEN54	80	51.620	Cercocebus_atys
ENSPSIG00000012807	TSEN54	99	52.083	ENSCLAG00000002924	TSEN54	80	52.083	Chinchilla_lanigera
ENSPSIG00000012807	TSEN54	99	50.808	ENSCSAG00000004809	TSEN54	80	51.852	Chlorocebus_sabaeus
ENSPSIG00000012807	TSEN54	100	88.140	ENSCPBG00000028071	TSEN54	82	88.140	Chrysemys_picta_bellii
ENSPSIG00000012807	TSEN54	99	51.389	ENSCANG00000028053	TSEN54	80	51.389	Colobus_angolensis_palliatus
ENSPSIG00000012807	TSEN54	99	50.465	ENSCGRG00001020029	Tsen54	80	50.465	Cricetulus_griseus_chok1gshd
ENSPSIG00000012807	TSEN54	99	50.465	ENSCGRG00000016289	Tsen54	95	50.465	Cricetulus_griseus_crigri
ENSPSIG00000012807	TSEN54	100	39.261	ENSCSEG00000020586	tsen54	99	39.261	Cynoglossus_semilaevis
ENSPSIG00000012807	TSEN54	100	45.794	ENSDARG00000036844	tsen54	100	46.028	Danio_rerio
ENSPSIG00000012807	TSEN54	99	50.114	ENSDNOG00000018452	TSEN54	80	52.425	Dasypus_novemcinctus
ENSPSIG00000012807	TSEN54	99	50.935	ENSDORG00000004073	Tsen54	80	51.402	Dipodomys_ordii
ENSPSIG00000012807	TSEN54	99	30.942	ENSEBUG00000005203	TSEN54	79	30.942	Eptatretus_burgeri
ENSPSIG00000012807	TSEN54	99	52.414	ENSEASG00005000579	TSEN54	80	52.414	Equus_asinus_asinus
ENSPSIG00000012807	TSEN54	99	52.184	ENSECAG00000004924	TSEN54	80	52.184	Equus_caballus
ENSPSIG00000012807	TSEN54	99	50.688	ENSEEUG00000008467	TSEN54	93	51.147	Erinaceus_europaeus
ENSPSIG00000012807	TSEN54	99	42.045	ENSELUG00000017703	tsen54	75	42.045	Esox_lucius
ENSPSIG00000012807	TSEN54	99	52.194	ENSFCAG00000023712	TSEN54	81	52.656	Felis_catus
ENSPSIG00000012807	TSEN54	99	66.276	ENSFALG00000001119	TSEN54	80	66.276	Ficedula_albicollis
ENSPSIG00000012807	TSEN54	99	53.380	ENSFDAG00000019090	TSEN54	93	53.380	Fukomys_damarensis
ENSPSIG00000012807	TSEN54	100	44.056	ENSFHEG00000005470	tsen54	80	44.522	Fundulus_heteroclitus
ENSPSIG00000012807	TSEN54	78	50.980	ENSGMOG00000013146	tsen54	80	50.980	Gadus_morhua
ENSPSIG00000012807	TSEN54	99	62.731	ENSGALG00000047163	TSEN54	84	62.731	Gallus_gallus
ENSPSIG00000012807	TSEN54	100	45.080	ENSGAFG00000005111	tsen54	80	45.309	Gambusia_affinis
ENSPSIG00000012807	TSEN54	100	41.860	ENSGACG00000014987	tsen54	82	42.558	Gasterosteus_aculeatus
ENSPSIG00000012807	TSEN54	100	86.279	ENSGAGG00000006825	TSEN54	80	86.279	Gopherus_agassizii
ENSPSIG00000012807	TSEN54	99	51.963	ENSGGOG00000009417	TSEN54	83	53.009	Gorilla_gorilla
ENSPSIG00000012807	TSEN54	89	42.188	ENSHBUG00000018296	tsen54	90	40.816	Haplochromis_burtoni
ENSPSIG00000012807	TSEN54	99	52.326	ENSHGLG00000007979	TSEN54	80	52.326	Heterocephalus_glaber_female
ENSPSIG00000012807	TSEN54	99	52.326	ENSHGLG00100005497	TSEN54	80	52.326	Heterocephalus_glaber_male
ENSPSIG00000012807	TSEN54	100	43.508	ENSHCOG00000007481	tsen54	99	43.508	Hippocampus_comes
ENSPSIG00000012807	TSEN54	100	38.532	ENSIPUG00000000590	tsen54	80	39.450	Ictalurus_punctatus
ENSPSIG00000012807	TSEN54	99	50.698	ENSSTOG00000012883	TSEN54	80	50.698	Ictidomys_tridecemlineatus
ENSPSIG00000012807	TSEN54	99	53.793	ENSJJAG00000007365	Tsen54	80	53.793	Jaculus_jaculus
ENSPSIG00000012807	TSEN54	100	44.570	ENSKMAG00000006944	tsen54	81	44.570	Kryptolebias_marmoratus
ENSPSIG00000012807	TSEN54	100	41.309	ENSLBEG00000004199	tsen54	81	41.309	Labrus_bergylta
ENSPSIG00000012807	TSEN54	100	46.560	ENSLACG00000009497	TSEN54	83	46.560	Latimeria_chalumnae
ENSPSIG00000012807	TSEN54	100	43.409	ENSLOCG00000011191	tsen54	81	44.444	Lepisosteus_oculatus
ENSPSIG00000012807	TSEN54	99	52.414	ENSLAFG00000011655	TSEN54	80	52.414	Loxodonta_africana
ENSPSIG00000012807	TSEN54	99	51.039	ENSMFAG00000000712	TSEN54	74	58.333	Macaca_fascicularis
ENSPSIG00000012807	TSEN54	99	50.808	ENSMNEG00000029199	TSEN54	74	58.333	Macaca_nemestrina
ENSPSIG00000012807	TSEN54	99	50.577	ENSMLEG00000044168	TSEN54	82	51.620	Mandrillus_leucophaeus
ENSPSIG00000012807	TSEN54	100	44.213	ENSMAMG00000019773	tsen54	80	44.342	Mastacembelus_armatus
ENSPSIG00000012807	TSEN54	100	43.519	ENSMZEG00005000884	tsen54	80	44.444	Maylandia_zebra
ENSPSIG00000012807	TSEN54	99	63.972	ENSMGAG00000009556	TSEN54	81	63.972	Meleagris_gallopavo
ENSPSIG00000012807	TSEN54	99	50.922	ENSMAUG00000016838	Tsen54	80	50.922	Mesocricetus_auratus
ENSPSIG00000012807	TSEN54	99	53.396	ENSMICG00000044012	TSEN54	80	53.864	Microcebus_murinus
ENSPSIG00000012807	TSEN54	99	52.681	ENSMOCG00000021585	Tsen54	80	52.681	Microtus_ochrogaster
ENSPSIG00000012807	TSEN54	100	42.032	ENSMMOG00000020189	tsen54	81	42.956	Mola_mola
ENSPSIG00000012807	TSEN54	99	54.338	ENSMODG00000007438	TSEN54	79	54.338	Monodelphis_domestica
ENSPSIG00000012807	TSEN54	100	45.662	ENSMALG00000020573	tsen54	81	45.227	Monopterus_albus
ENSPSIG00000012807	TSEN54	99	52.315	MGP_CAROLIEiJ_G0017417	Tsen54	80	52.315	Mus_caroli
ENSPSIG00000012807	TSEN54	99	52.304	ENSMUSG00000020781	Tsen54	80	52.304	Mus_musculus
ENSPSIG00000012807	TSEN54	99	52.425	MGP_PahariEiJ_G0018547	Tsen54	80	52.425	Mus_pahari
ENSPSIG00000012807	TSEN54	99	52.535	MGP_SPRETEiJ_G0018262	Tsen54	80	52.535	Mus_spretus
ENSPSIG00000012807	TSEN54	99	50.926	ENSMPUG00000013870	TSEN54	80	51.620	Mustela_putorius_furo
ENSPSIG00000012807	TSEN54	99	53.613	ENSMLUG00000015298	TSEN54	81	53.828	Myotis_lucifugus
ENSPSIG00000012807	TSEN54	99	52.103	ENSNGAG00000015673	Tsen54	80	52.103	Nannospalax_galili
ENSPSIG00000012807	TSEN54	99	51.981	ENSMEUG00000011908	TSEN54	91	51.981	Notamacropus_eugenii
ENSPSIG00000012807	TSEN54	99	46.404	ENSOPRG00000012513	TSEN54	80	46.404	Ochotona_princeps
ENSPSIG00000012807	TSEN54	100	45.767	ENSONIG00000009543	tsen54	81	45.767	Oreochromis_niloticus
ENSPSIG00000012807	TSEN54	99	48.380	ENSOCUG00000009875	TSEN54	78	48.741	Oryctolagus_cuniculus
ENSPSIG00000012807	TSEN54	99	44.626	ENSORLG00000000852	tsen54	80	44.626	Oryzias_latipes
ENSPSIG00000012807	TSEN54	99	43.619	ENSORLG00020018221	tsen54	89	43.619	Oryzias_latipes_hni
ENSPSIG00000012807	TSEN54	99	43.619	ENSORLG00015009413	tsen54	66	59.615	Oryzias_latipes_hsok
ENSPSIG00000012807	TSEN54	100	43.925	ENSOMEG00000014402	tsen54	78	43.925	Oryzias_melastigma
ENSPSIG00000012807	TSEN54	99	49.767	ENSOGAG00000001442	TSEN54	80	49.767	Otolemur_garnettii
ENSPSIG00000012807	TSEN54	99	52.074	ENSOARG00000010361	TSEN54	93	52.644	Ovis_aries
ENSPSIG00000012807	TSEN54	99	52.436	ENSPPAG00000043519	TSEN54	85	52.436	Pan_paniscus
ENSPSIG00000012807	TSEN54	99	52.656	ENSPPRG00000009162	TSEN54	81	53.118	Panthera_pardus
ENSPSIG00000012807	TSEN54	99	52.436	ENSPTIG00000019312	TSEN54	90	52.668	Panthera_tigris_altaica
ENSPSIG00000012807	TSEN54	99	51.963	ENSPTRG00000009646	TSEN54	80	53.009	Pan_troglodytes
ENSPSIG00000012807	TSEN54	99	50.808	ENSPANG00000020133	TSEN54	73	59.091	Papio_anubis
ENSPSIG00000012807	TSEN54	99	45.116	ENSPKIG00000023018	tsen54	99	46.759	Paramormyrops_kingsleyae
ENSPSIG00000012807	TSEN54	100	31.121	ENSPMGG00000019578	tsen54	85	31.121	Periophthalmus_magnuspinnatus
ENSPSIG00000012807	TSEN54	99	50.922	ENSPEMG00000014857	Tsen54	80	50.922	Peromyscus_maniculatus_bairdii
ENSPSIG00000012807	TSEN54	100	44.773	ENSPFOG00000022740	tsen54	80	45.000	Poecilia_formosa
ENSPSIG00000012807	TSEN54	100	44.394	ENSPLAG00000014847	tsen54	80	44.622	Poecilia_latipinna
ENSPSIG00000012807	TSEN54	100	43.707	ENSPMEG00000022876	tsen54	80	43.936	Poecilia_mexicana
ENSPSIG00000012807	TSEN54	100	44.393	ENSPREG00000013090	tsen54	80	44.626	Poecilia_reticulata
ENSPSIG00000012807	TSEN54	99	49.883	ENSPPYG00000008629	TSEN54	87	50.585	Pongo_abelii
ENSPSIG00000012807	TSEN54	94	45.455	ENSPCAG00000002093	TSEN54	79	45.455	Procavia_capensis
ENSPSIG00000012807	TSEN54	99	53.580	ENSPCOG00000027880	TSEN54	80	54.042	Propithecus_coquereli
ENSPSIG00000012807	TSEN54	99	53.241	ENSPVAG00000008446	TSEN54	80	53.241	Pteropus_vampyrus
ENSPSIG00000012807	TSEN54	100	44.521	ENSPNYG00000010217	tsen54	99	43.607	Pundamilia_nyererei
ENSPSIG00000012807	TSEN54	100	46.744	ENSPNAG00000003770	tsen54	81	46.744	Pygocentrus_nattereri
ENSPSIG00000012807	TSEN54	99	52.414	ENSRNOG00000004598	Tsen54	80	52.414	Rattus_norvegicus
ENSPSIG00000012807	TSEN54	99	51.389	ENSRBIG00000043040	TSEN54	75	56.522	Rhinopithecus_bieti
ENSPSIG00000012807	TSEN54	99	51.389	ENSRROG00000030797	TSEN54	80	51.389	Rhinopithecus_roxellana
ENSPSIG00000012807	TSEN54	99	47.575	ENSSBOG00000013543	TSEN54	79	48.843	Saimiri_boliviensis_boliviensis
ENSPSIG00000012807	TSEN54	99	53.881	ENSSHAG00000018127	TSEN54	80	53.881	Sarcophilus_harrisii
ENSPSIG00000012807	TSEN54	99	46.495	ENSSFOG00015004093	tsen54	99	46.729	Scleropages_formosus
ENSPSIG00000012807	TSEN54	100	42.056	ENSSMAG00000012449	tsen54	97	43.287	Scophthalmus_maximus
ENSPSIG00000012807	TSEN54	100	45.000	ENSSDUG00000021506	tsen54	81	45.000	Seriola_dumerili
ENSPSIG00000012807	TSEN54	100	44.545	ENSSLDG00000016303	tsen54	81	44.545	Seriola_lalandi_dorsalis
ENSPSIG00000012807	TSEN54	79	60.694	ENSSPUG00000008988	TSEN54	77	60.694	Sphenodon_punctatus
ENSPSIG00000012807	TSEN54	100	45.392	ENSSPAG00000008098	-	99	43.619	Stegastes_partitus
ENSPSIG00000012807	TSEN54	100	43.619	ENSSPAG00000008047	tsen54	99	43.619	Stegastes_partitus
ENSPSIG00000012807	TSEN54	99	53.103	ENSSSCG00000036852	TSEN54	90	53.563	Sus_scrofa
ENSPSIG00000012807	TSEN54	99	66.121	ENSTGUG00000008548	TSEN54	94	66.121	Taeniopygia_guttata
ENSPSIG00000012807	TSEN54	100	42.424	ENSTRUG00000004230	tsen54	80	42.890	Takifugu_rubripes
ENSPSIG00000012807	TSEN54	99	53.793	ENSTTRG00000015828	TSEN54	94	54.023	Tursiops_truncatus
ENSPSIG00000012807	TSEN54	99	52.546	ENSUAMG00000010045	TSEN54	99	52.546	Ursus_americanus
ENSPSIG00000012807	TSEN54	99	51.852	ENSUMAG00000008979	TSEN54	99	52.315	Ursus_maritimus
ENSPSIG00000012807	TSEN54	99	51.389	ENSVVUG00000011411	TSEN54	81	52.778	Vulpes_vulpes
ENSPSIG00000012807	TSEN54	100	47.045	ENSXETG00000012532	tsen54	63	77.143	Xenopus_tropicalis
ENSPSIG00000012807	TSEN54	100	42.506	ENSXCOG00000018245	tsen54	81	69.863	Xiphophorus_couchianus
ENSPSIG00000012807	TSEN54	100	43.707	ENSXMAG00000018818	tsen54	80	43.936	Xiphophorus_maculatus