EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000012885 (Gene tree)
Gene ID: 102462197
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 111746 bases
Position: chrJH209961.1:933392-1045137
Accession: 102462197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014363	La	PF05383.17	7.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014431	LARP1B-201	2914	XM_006127886	ENSPSIP00000014363	931 (aa)	-	K7G252

Gene Model

Click here to download ENSPSIG00000012885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012885's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012885	LARP1B	99	75.000	ENSG00000138709	LARP1B	96	79.167	Homo_sapiens
ENSPSIG00000012885	LARP1B	99	57.447	ENSAPOG00000020101	larp1b	87	56.314	Acanthochromis_polyacanthus
ENSPSIG00000012885	LARP1B	59	76.937	ENSAMEG00000002748	LARP1B	99	76.757	Ailuropoda_melanoleuca
ENSPSIG00000012885	LARP1B	99	55.074	ENSACIG00000023890	larp1b	85	55.191	Amphilophus_citrinellus
ENSPSIG00000012885	LARP1B	92	54.535	ENSAOCG00000014268	larp1b	89	56.157	Amphiprion_ocellaris
ENSPSIG00000012885	LARP1B	99	57.537	ENSAPEG00000004126	larp1b	87	56.674	Amphiprion_percula
ENSPSIG00000012885	LARP1B	99	57.968	ENSATEG00000017849	larp1b	87	58.048	Anabas_testudineus
ENSPSIG00000012885	LARP1B	95	75.960	ENSAPLG00000010129	LARP1B	99	75.604	Anas_platyrhynchos
ENSPSIG00000012885	LARP1B	97	79.431	ENSACAG00000011338	LARP1B	93	81.072	Anolis_carolinensis
ENSPSIG00000012885	LARP1B	81	69.582	ENSANAG00000034618	LARP1B	96	68.693	Aotus_nancymaae
ENSPSIG00000012885	LARP1B	99	57.099	ENSACLG00000011948	larp1b	86	57.202	Astatotilapia_calliptera
ENSPSIG00000012885	LARP1B	79	54.005	ENSAMXG00000006805	larp1b	83	53.209	Astyanax_mexicanus
ENSPSIG00000012885	LARP1B	99	77.131	ENSBTAG00000012135	LARP1B	98	75.097	Bos_taurus
ENSPSIG00000012885	LARP1B	93	77.752	ENSCJAG00000003338	LARP1B	99	78.766	Callithrix_jacchus
ENSPSIG00000012885	LARP1B	93	80.738	ENSCAFG00000003831	LARP1B	96	78.888	Canis_familiaris
ENSPSIG00000012885	LARP1B	93	79.636	ENSCAFG00020018899	LARP1B	98	76.133	Canis_lupus_dingo
ENSPSIG00000012885	LARP1B	93	77.879	ENSCHIG00000023144	LARP1B	99	73.535	Capra_hircus
ENSPSIG00000012885	LARP1B	92	77.335	ENSCCAG00000021948	LARP1B	96	77.904	Cebus_capucinus
ENSPSIG00000012885	LARP1B	93	76.163	ENSCATG00000013541	LARP1B	96	76.731	Cercocebus_atys
ENSPSIG00000012885	LARP1B	93	77.149	ENSCSAG00000003582	LARP1B	96	77.715	Chlorocebus_sabaeus
ENSPSIG00000012885	LARP1B	93	70.843	ENSCHOG00000005354	LARP1B	95	70.957	Choloepus_hoffmanni
ENSPSIG00000012885	LARP1B	99	89.914	ENSCPBG00000017480	LARP1B	89	91.309	Chrysemys_picta_bellii
ENSPSIG00000012885	LARP1B	93	73.281	ENSCANG00000026958	LARP1B	96	73.625	Colobus_angolensis_palliatus
ENSPSIG00000012885	LARP1B	99	53.815	ENSCSEG00000013519	larp1b	87	54.711	Cynoglossus_semilaevis
ENSPSIG00000012885	LARP1B	99	55.613	ENSCVAG00000005046	larp1b	87	55.876	Cyprinodon_variegatus
ENSPSIG00000012885	LARP1B	99	54.574	ENSDARG00000061169	larp1b	82	56.362	Danio_rerio
ENSPSIG00000012885	LARP1B	55	75.534	ENSDNOG00000018765	-	99	76.493	Dasypus_novemcinctus
ENSPSIG00000012885	LARP1B	82	71.884	ENSETEG00000012497	LARP1B	84	72.340	Echinops_telfairi
ENSPSIG00000012885	LARP1B	97	52.120	ENSEBUG00000003668	larp1b	92	51.860	Eptatretus_burgeri
ENSPSIG00000012885	LARP1B	93	77.816	ENSEASG00005018106	LARP1B	99	77.003	Equus_asinus_asinus
ENSPSIG00000012885	LARP1B	99	77.031	ENSECAG00000001088	LARP1B	83	76.749	Equus_caballus
ENSPSIG00000012885	LARP1B	65	57.662	ENSELUG00000023774	larp1b	88	48.541	Esox_lucius
ENSPSIG00000012885	LARP1B	55	76.983	ENSFCAG00000014650	-	98	76.789	Felis_catus
ENSPSIG00000012885	LARP1B	93	76.617	ENSFALG00000008098	LARP1B	93	77.367	Ficedula_albicollis
ENSPSIG00000012885	LARP1B	99	57.158	ENSFHEG00000010264	larp1b	84	56.379	Fundulus_heteroclitus
ENSPSIG00000012885	LARP1B	85	69.288	ENSGMOG00000005207	larp1b	77	69.663	Gadus_morhua
ENSPSIG00000012885	LARP1B	99	76.237	ENSGALG00000010207	LARP1B	90	76.237	Gallus_gallus
ENSPSIG00000012885	LARP1B	86	60.343	ENSGAFG00000012012	larp1b	90	60.832	Gambusia_affinis
ENSPSIG00000012885	LARP1B	99	51.643	ENSGACG00000004609	larp1b	87	54.735	Gasterosteus_aculeatus
ENSPSIG00000012885	LARP1B	99	90.645	ENSGAGG00000017209	LARP1B	88	91.290	Gopherus_agassizii
ENSPSIG00000012885	LARP1B	93	76.644	ENSGGOG00000015900	LARP1B	99	74.275	Gorilla_gorilla
ENSPSIG00000012885	LARP1B	99	57.113	ENSHBUG00000009730	larp1b	86	57.216	Haplochromis_burtoni
ENSPSIG00000012885	LARP1B	73	62.811	ENSHCOG00000000918	larp1b	94	63.235	Hippocampus_comes
ENSPSIG00000012885	LARP1B	99	55.996	ENSIPUG00000012138	larp1b	83	56.726	Ictalurus_punctatus
ENSPSIG00000012885	LARP1B	99	54.555	ENSKMAG00000011589	larp1b	89	56.122	Kryptolebias_marmoratus
ENSPSIG00000012885	LARP1B	99	57.067	ENSLBEG00000005655	larp1b	87	56.923	Labrus_bergylta
ENSPSIG00000012885	LARP1B	99	74.573	ENSLACG00000015247	LARP1B	99	72.123	Latimeria_chalumnae
ENSPSIG00000012885	LARP1B	97	66.772	ENSLOCG00000010684	larp1b	94	68.360	Lepisosteus_oculatus
ENSPSIG00000012885	LARP1B	93	77.639	ENSMFAG00000002218	LARP1B	99	75.435	Macaca_fascicularis
ENSPSIG00000012885	LARP1B	93	77.526	ENSMMUG00000021347	LARP1B	99	75.242	Macaca_mulatta
ENSPSIG00000012885	LARP1B	87	76.662	ENSMNEG00000030406	LARP1B	95	76.521	Macaca_nemestrina
ENSPSIG00000012885	LARP1B	93	74.688	ENSMLEG00000009306	LARP1B	96	75.482	Mandrillus_leucophaeus
ENSPSIG00000012885	LARP1B	99	57.835	ENSMAMG00000000081	larp1b	88	58.454	Mastacembelus_armatus
ENSPSIG00000012885	LARP1B	75	62.465	ENSMZEG00005002545	larp1b	92	62.450	Maylandia_zebra
ENSPSIG00000012885	LARP1B	93	68.237	ENSMGAG00000004809	LARP1B	99	67.657	Meleagris_gallopavo
ENSPSIG00000012885	LARP1B	93	80.623	ENSMICG00000036111	LARP1B	98	78.210	Microcebus_murinus
ENSPSIG00000012885	LARP1B	54	58.431	ENSMICG00000028052	-	99	59.020	Microcebus_murinus
ENSPSIG00000012885	LARP1B	99	80.289	ENSMODG00000012300	LARP1B	86	79.630	Monodelphis_domestica
ENSPSIG00000012885	LARP1B	99	57.643	ENSMALG00000003638	larp1b	87	57.938	Monopterus_albus
ENSPSIG00000012885	LARP1B	95	80.022	ENSMPUG00000017365	LARP1B	83	77.564	Mustela_putorius_furo
ENSPSIG00000012885	LARP1B	95	73.908	ENSMLUG00000010229	LARP1B	99	74.563	Myotis_lucifugus
ENSPSIG00000012885	LARP1B	83	57.550	ENSNBRG00000023846	larp1b	83	57.697	Neolamprologus_brichardi
ENSPSIG00000012885	LARP1B	93	76.670	ENSNLEG00000013819	LARP1B	99	74.855	Nomascus_leucogenys
ENSPSIG00000012885	LARP1B	80	80.000	ENSMEUG00000010308	LARP1B	84	78.875	Notamacropus_eugenii
ENSPSIG00000012885	LARP1B	85	68.486	ENSOPRG00000005478	LARP1B	86	68.852	Ochotona_princeps
ENSPSIG00000012885	LARP1B	99	55.704	ENSONIG00000012386	larp1b	99	55.728	Oreochromis_niloticus
ENSPSIG00000012885	LARP1B	93	77.393	ENSOCUG00000013330	LARP1B	94	77.970	Oryctolagus_cuniculus
ENSPSIG00000012885	LARP1B	99	54.819	ENSORLG00000017954	larp1b	86	55.151	Oryzias_latipes
ENSPSIG00000012885	LARP1B	99	55.026	ENSORLG00020013081	larp1b	86	55.255	Oryzias_latipes_hni
ENSPSIG00000012885	LARP1B	99	55.348	ENSORLG00015009580	larp1b	86	55.359	Oryzias_latipes_hsok
ENSPSIG00000012885	LARP1B	99	56.087	ENSOMEG00000004210	larp1b	86	56.726	Oryzias_melastigma
ENSPSIG00000012885	LARP1B	95	77.503	ENSOGAG00000005771	LARP1B	100	77.728	Otolemur_garnettii
ENSPSIG00000012885	LARP1B	93	77.159	ENSOARG00000015300	LARP1B	96	76.364	Ovis_aries
ENSPSIG00000012885	LARP1B	93	76.871	ENSPPAG00000030439	LARP1B	96	77.324	Pan_paniscus
ENSPSIG00000012885	LARP1B	55	76.983	ENSPPRG00000002743	-	98	76.789	Panthera_pardus
ENSPSIG00000012885	LARP1B	55	76.983	ENSPTIG00000011225	LARP1B	98	76.789	Panthera_tigris_altaica
ENSPSIG00000012885	LARP1B	93	76.644	ENSPTRG00000016437	LARP1B	96	77.098	Pan_troglodytes
ENSPSIG00000012885	LARP1B	93	77.639	ENSPANG00000012488	LARP1B	99	75.435	Papio_anubis
ENSPSIG00000012885	LARP1B	99	51.966	ENSPKIG00000014360	larp1b	93	52.070	Paramormyrops_kingsleyae
ENSPSIG00000012885	LARP1B	73	63.476	ENSPMGG00000007207	larp1b	80	62.887	Periophthalmus_magnuspinnatus
ENSPSIG00000012885	LARP1B	71	59.448	ENSPMAG00000002700	larp1b	95	54.951	Petromyzon_marinus
ENSPSIG00000012885	LARP1B	93	82.993	ENSPCIG00000026516	LARP1B	93	86.629	Phascolarctos_cinereus
ENSPSIG00000012885	LARP1B	99	56.085	ENSPFOG00000019519	larp1b	86	56.998	Poecilia_formosa
ENSPSIG00000012885	LARP1B	62	50.493	ENSPFOG00000022837	-	86	51.316	Poecilia_formosa
ENSPSIG00000012885	LARP1B	99	57.380	ENSPLAG00000007115	larp1b	86	57.246	Poecilia_latipinna
ENSPSIG00000012885	LARP1B	99	57.923	ENSPMEG00000001224	larp1b	86	57.780	Poecilia_mexicana
ENSPSIG00000012885	LARP1B	93	74.858	ENSPCAG00000007546	LARP1B	95	75.540	Procavia_capensis
ENSPSIG00000012885	LARP1B	82	79.310	ENSPCOG00000021874	LARP1B	98	77.432	Propithecus_coquereli
ENSPSIG00000012885	LARP1B	93	74.510	ENSPVAG00000005373	LARP1B	95	74.048	Pteropus_vampyrus
ENSPSIG00000012885	LARP1B	75	62.447	ENSPNYG00000017357	larp1b	92	62.299	Pundamilia_nyererei
ENSPSIG00000012885	LARP1B	99	54.583	ENSPNAG00000008823	larp1b	81	58.399	Pygocentrus_nattereri
ENSPSIG00000012885	LARP1B	55	74.612	ENSRBIG00000039982	-	99	74.419	Rhinopithecus_bieti
ENSPSIG00000012885	LARP1B	93	77.526	ENSRROG00000030771	LARP1B	99	75.435	Rhinopithecus_roxellana
ENSPSIG00000012885	LARP1B	70	80.535	ENSSHAG00000014474	LARP1B	99	81.493	Sarcophilus_harrisii
ENSPSIG00000012885	LARP1B	97	56.250	ENSSMAG00000006347	larp1b	92	56.250	Scophthalmus_maximus
ENSPSIG00000012885	LARP1B	99	57.585	ENSSDUG00000004182	larp1b	85	57.479	Seriola_dumerili
ENSPSIG00000012885	LARP1B	85	61.669	ENSSLDG00000014613	larp1b	78	60.876	Seriola_lalandi_dorsalis
ENSPSIG00000012885	LARP1B	90	74.643	ENSSPUG00000011837	LARP1B	93	72.123	Sphenodon_punctatus
ENSPSIG00000012885	LARP1B	99	56.392	ENSSPAG00000017772	larp1b	86	57.055	Stegastes_partitus
ENSPSIG00000012885	LARP1B	99	76.026	ENSSSCG00000034280	LARP1B	99	88.660	Sus_scrofa
ENSPSIG00000012885	LARP1B	85	78.514	ENSTGUG00000002098	-	94	73.008	Taeniopygia_guttata
ENSPSIG00000012885	LARP1B	99	55.381	ENSTRUG00000005612	larp1b	86	55.463	Takifugu_rubripes
ENSPSIG00000012885	LARP1B	99	54.949	ENSTNIG00000012398	larp1b	99	55.399	Tetraodon_nigroviridis
ENSPSIG00000012885	LARP1B	80	68.244	ENSTBEG00000004177	LARP1B	84	68.244	Tupaia_belangeri
ENSPSIG00000012885	LARP1B	85	77.516	ENSTTRG00000012984	LARP1B	87	76.894	Tursiops_truncatus
ENSPSIG00000012885	LARP1B	93	80.578	ENSUMAG00000007373	LARP1B	94	80.000	Ursus_maritimus
ENSPSIG00000012885	LARP1B	93	67.426	ENSVPAG00000007223	LARP1B	96	67.426	Vicugna_pacos
ENSPSIG00000012885	LARP1B	93	80.738	ENSVVUG00000011307	LARP1B	99	78.984	Vulpes_vulpes
ENSPSIG00000012885	LARP1B	99	59.979	ENSXETG00000022512	larp1b	90	59.979	Xenopus_tropicalis
ENSPSIG00000012885	LARP1B	80	56.325	ENSXCOG00000004435	larp1b	74	56.933	Xiphophorus_couchianus
ENSPSIG00000012885	LARP1B	99	56.392	ENSXMAG00000008150	larp1b	86	57.350	Xiphophorus_maculatus