EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012915 (Gene tree)
Gene ID: 102451878
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 195744 bases
Position: chrJH207156.1:4029864-4225607
Accession: 102451878
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014646	R3H	PF01424.22	3.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014715	R3HDM1-201	3710	XM_006117053	ENSPSIP00000014646	1092 (aa)	XP_006117115	K7G2Y5

Gene Model

Click here to download ENSPSIG00000012915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012915	R3HDM1	71	51.374	ENSPSIG00000009255	ARPP21	96	52.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012915	R3HDM1	100	79.024	ENSG00000048991	R3HDM1	88	95.946	Homo_sapiens
ENSPSIG00000012915	R3HDM1	89	47.509	ENSAPOG00000020850	r3hdm1	97	46.809	Acanthochromis_polyacanthus
ENSPSIG00000012915	R3HDM1	100	78.662	ENSAMEG00000014886	R3HDM1	100	78.752	Ailuropoda_melanoleuca
ENSPSIG00000012915	R3HDM1	88	47.227	ENSAOCG00000005192	r3hdm1	99	46.525	Amphiprion_ocellaris
ENSPSIG00000012915	R3HDM1	88	46.596	ENSAPEG00000016108	r3hdm1	99	45.865	Amphiprion_percula
ENSPSIG00000012915	R3HDM1	88	46.035	ENSATEG00000000232	r3hdm1	99	45.288	Anabas_testudineus
ENSPSIG00000012915	R3HDM1	100	87.226	ENSAPLG00000015231	R3HDM1	100	86.770	Anas_platyrhynchos
ENSPSIG00000012915	R3HDM1	100	81.074	ENSACAG00000001676	R3HDM1	100	81.602	Anolis_carolinensis
ENSPSIG00000012915	R3HDM1	100	79.133	ENSANAG00000035334	R3HDM1	100	78.862	Aotus_nancymaae
ENSPSIG00000012915	R3HDM1	80	48.669	ENSACLG00000027282	r3hdm1	95	48.511	Astatotilapia_calliptera
ENSPSIG00000012915	R3HDM1	92	70.743	ENSAMXG00000012861	R3HDM1	100	70.673	Astyanax_mexicanus
ENSPSIG00000012915	R3HDM1	88	69.272	ENSAMXG00000003536	r3hdm1	94	69.189	Astyanax_mexicanus
ENSPSIG00000012915	R3HDM1	100	75.595	ENSBTAG00000013302	R3HDM1	100	75.968	Bos_taurus
ENSPSIG00000012915	R3HDM1	100	79.186	ENSCJAG00000011718	R3HDM1	100	79.005	Callithrix_jacchus
ENSPSIG00000012915	R3HDM1	100	78.933	ENSCAFG00000005075	R3HDM1	100	79.024	Canis_familiaris
ENSPSIG00000012915	R3HDM1	100	78.843	ENSCAFG00020016119	R3HDM1	100	78.933	Canis_lupus_dingo
ENSPSIG00000012915	R3HDM1	100	78.818	ENSCHIG00000020851	R3HDM1	100	78.909	Capra_hircus
ENSPSIG00000012915	R3HDM1	100	74.233	ENSCPOG00000012784	R3HDM1	100	76.412	Cavia_porcellus
ENSPSIG00000012915	R3HDM1	100	78.481	ENSCCAG00000027199	R3HDM1	100	78.210	Cebus_capucinus
ENSPSIG00000012915	R3HDM1	98	85.049	ENSCATG00000023642	R3HDM1	100	78.391	Cercocebus_atys
ENSPSIG00000012915	R3HDM1	100	74.386	ENSCLAG00000007962	R3HDM1	100	79.070	Chinchilla_lanigera
ENSPSIG00000012915	R3HDM1	100	75.132	ENSCSAG00000016356	R3HDM1	100	76.140	Chlorocebus_sabaeus
ENSPSIG00000012915	R3HDM1	87	67.486	ENSCHOG00000013638	R3HDM1	86	72.452	Choloepus_hoffmanni
ENSPSIG00000012915	R3HDM1	88	92.701	ENSCPBG00000009645	R3HDM1	100	95.941	Chrysemys_picta_bellii
ENSPSIG00000012915	R3HDM1	100	79.133	ENSCANG00000034748	R3HDM1	100	78.771	Colobus_angolensis_palliatus
ENSPSIG00000012915	R3HDM1	99	74.648	ENSCGRG00001012357	R3hdm1	97	74.715	Cricetulus_griseus_chok1gshd
ENSPSIG00000012915	R3HDM1	99	76.944	ENSCGRG00000012080	R3hdm1	100	79.402	Cricetulus_griseus_crigri
ENSPSIG00000012915	R3HDM1	88	44.560	ENSCSEG00000008944	r3hdm1	99	44.131	Cynoglossus_semilaevis
ENSPSIG00000012915	R3HDM1	88	48.303	ENSCVAG00000007582	r3hdm1	99	47.915	Cyprinodon_variegatus
ENSPSIG00000012915	R3HDM1	100	76.061	ENSDNOG00000000771	R3HDM1	100	76.152	Dasypus_novemcinctus
ENSPSIG00000012915	R3HDM1	100	70.109	ENSETEG00000013606	R3HDM1	100	70.743	Echinops_telfairi
ENSPSIG00000012915	R3HDM1	60	42.692	ENSEBUG00000014746	arpp21	97	43.328	Eptatretus_burgeri
ENSPSIG00000012915	R3HDM1	100	78.766	ENSEASG00005007392	R3HDM1	100	78.857	Equus_asinus_asinus
ENSPSIG00000012915	R3HDM1	100	78.623	ENSECAG00000019114	R3HDM1	100	78.714	Equus_caballus
ENSPSIG00000012915	R3HDM1	87	75.138	ENSEEUG00000012589	R3HDM1	84	76.154	Erinaceus_europaeus
ENSPSIG00000012915	R3HDM1	94	56.150	ENSELUG00000004909	R3HDM1	99	55.410	Esox_lucius
ENSPSIG00000012915	R3HDM1	93	52.411	ENSELUG00000014413	r3hdm1	100	52.656	Esox_lucius
ENSPSIG00000012915	R3HDM1	100	78.857	ENSFCAG00000027113	R3HDM1	100	78.947	Felis_catus
ENSPSIG00000012915	R3HDM1	74	79.502	ENSFALG00000013731	R3HDM1	93	69.691	Ficedula_albicollis
ENSPSIG00000012915	R3HDM1	100	74.759	ENSFDAG00000016478	R3HDM1	95	84.615	Fukomys_damarensis
ENSPSIG00000012915	R3HDM1	88	46.623	ENSFHEG00000018713	r3hdm1	100	47.741	Fundulus_heteroclitus
ENSPSIG00000012915	R3HDM1	58	65.714	ENSGMOG00000006042	-	81	61.670	Gadus_morhua
ENSPSIG00000012915	R3HDM1	83	87.908	ENSGALG00000012246	R3HDM1	99	87.869	Gallus_gallus
ENSPSIG00000012915	R3HDM1	78	49.457	ENSGAFG00000006203	r3hdm1	94	49.022	Gambusia_affinis
ENSPSIG00000012915	R3HDM1	86	46.794	ENSGACG00000014925	r3hdm1	99	46.974	Gasterosteus_aculeatus
ENSPSIG00000012915	R3HDM1	100	91.956	ENSGAGG00000007840	R3HDM1	100	91.773	Gopherus_agassizii
ENSPSIG00000012915	R3HDM1	100	79.204	ENSGGOG00000008156	R3HDM1	100	78.843	Gorilla_gorilla
ENSPSIG00000012915	R3HDM1	50	56.560	ENSHBUG00000015737	R3HDM1	90	57.495	Haplochromis_burtoni
ENSPSIG00000012915	R3HDM1	100	74.582	ENSHGLG00000015718	R3HDM1	100	79.070	Heterocephalus_glaber_female
ENSPSIG00000012915	R3HDM1	100	57.971	ENSHGLG00100015374	-	100	57.790	Heterocephalus_glaber_male
ENSPSIG00000012915	R3HDM1	100	74.494	ENSHGLG00100003184	-	100	79.070	Heterocephalus_glaber_male
ENSPSIG00000012915	R3HDM1	79	44.079	ENSHCOG00000013366	r3hdm1	88	59.250	Hippocampus_comes
ENSPSIG00000012915	R3HDM1	85	67.771	ENSIPUG00000013629	r3hdm1	95	69.375	Ictalurus_punctatus
ENSPSIG00000012915	R3HDM1	81	65.871	ENSIPUG00000001676	R3HDM1	99	65.714	Ictalurus_punctatus
ENSPSIG00000012915	R3HDM1	100	77.939	ENSSTOG00000007572	R3HDM1	95	85.000	Ictidomys_tridecemlineatus
ENSPSIG00000012915	R3HDM1	95	74.105	ENSLACG00000005334	R3HDM1	99	73.597	Latimeria_chalumnae
ENSPSIG00000012915	R3HDM1	100	68.072	ENSLOCG00000001641	r3hdm1	100	67.504	Lepisosteus_oculatus
ENSPSIG00000012915	R3HDM1	100	76.011	ENSLAFG00000009065	R3HDM1	100	75.835	Loxodonta_africana
ENSPSIG00000012915	R3HDM1	100	79.024	ENSMFAG00000030331	R3HDM1	100	78.662	Macaca_fascicularis
ENSPSIG00000012915	R3HDM1	100	78.843	ENSMMUG00000009844	R3HDM1	100	78.481	Macaca_mulatta
ENSPSIG00000012915	R3HDM1	100	78.933	ENSMNEG00000027793	R3HDM1	100	78.571	Macaca_nemestrina
ENSPSIG00000012915	R3HDM1	100	79.024	ENSMLEG00000043189	R3HDM1	100	78.662	Mandrillus_leucophaeus
ENSPSIG00000012915	R3HDM1	88	48.750	ENSMAMG00000004532	r3hdm1	99	47.919	Mastacembelus_armatus
ENSPSIG00000012915	R3HDM1	88	47.780	ENSMZEG00005003157	r3hdm1	99	47.637	Maylandia_zebra
ENSPSIG00000012915	R3HDM1	100	86.642	ENSMGAG00000012461	R3HDM1	100	86.642	Meleagris_gallopavo
ENSPSIG00000012915	R3HDM1	100	74.366	ENSMAUG00000010315	R3hdm1	100	79.734	Mesocricetus_auratus
ENSPSIG00000012915	R3HDM1	96	49.625	ENSMICG00000042655	-	100	76.108	Microcebus_murinus
ENSPSIG00000012915	R3HDM1	100	77.166	ENSMICG00000005900	-	100	77.166	Microcebus_murinus
ENSPSIG00000012915	R3HDM1	50	83.610	ENSMOCG00000019833	-	100	79.402	Microtus_ochrogaster
ENSPSIG00000012915	R3HDM1	90	76.702	ENSMODG00000000923	R3HDM1	97	76.031	Monodelphis_domestica
ENSPSIG00000012915	R3HDM1	99	46.002	ENSMALG00000009000	r3hdm1	100	45.259	Monopterus_albus
ENSPSIG00000012915	R3HDM1	100	74.670	MGP_CAROLIEiJ_G0014543	R3hdm1	100	79.402	Mus_caroli
ENSPSIG00000012915	R3HDM1	100	74.055	ENSMUSG00000056211	R3hdm1	100	79.402	Mus_musculus
ENSPSIG00000012915	R3HDM1	100	74.406	MGP_PahariEiJ_G0027779	R3hdm1	100	79.070	Mus_pahari
ENSPSIG00000012915	R3HDM1	100	74.055	MGP_SPRETEiJ_G0015350	R3hdm1	100	79.402	Mus_spretus
ENSPSIG00000012915	R3HDM1	100	78.714	ENSMPUG00000002412	R3HDM1	100	78.804	Mustela_putorius_furo
ENSPSIG00000012915	R3HDM1	100	77.818	ENSMLUG00000013824	R3HDM1	100	77.728	Myotis_lucifugus
ENSPSIG00000012915	R3HDM1	100	79.204	ENSNLEG00000008622	R3HDM1	100	78.933	Nomascus_leucogenys
ENSPSIG00000012915	R3HDM1	89	70.329	ENSMEUG00000011784	R3HDM1	100	70.637	Notamacropus_eugenii
ENSPSIG00000012915	R3HDM1	100	73.573	ENSODEG00000008607	R3HDM1	100	79.734	Octodon_degus
ENSPSIG00000012915	R3HDM1	94	47.473	ENSONIG00000012017	r3hdm1	99	46.841	Oreochromis_niloticus
ENSPSIG00000012915	R3HDM1	100	80.892	ENSOANG00000007987	R3HDM1	100	81.056	Ornithorhynchus_anatinus
ENSPSIG00000012915	R3HDM1	89	77.688	ENSOCUG00000017366	R3HDM1	98	77.688	Oryctolagus_cuniculus
ENSPSIG00000012915	R3HDM1	78	47.755	ENSORLG00000004297	r3hdm1	94	48.177	Oryzias_latipes
ENSPSIG00000012915	R3HDM1	88	47.301	ENSORLG00015017355	r3hdm1	99	47.633	Oryzias_latipes_hsok
ENSPSIG00000012915	R3HDM1	100	78.604	ENSOGAG00000003136	R3HDM1	100	78.332	Otolemur_garnettii
ENSPSIG00000012915	R3HDM1	100	78.799	ENSOARG00000010788	R3HDM1	100	78.890	Ovis_aries
ENSPSIG00000012915	R3HDM1	100	78.881	ENSPPAG00000027858	R3HDM1	100	78.520	Pan_paniscus
ENSPSIG00000012915	R3HDM1	100	78.675	ENSPPRG00000002626	R3HDM1	100	78.766	Panthera_pardus
ENSPSIG00000012915	R3HDM1	100	78.766	ENSPTIG00000016581	R3HDM1	100	78.857	Panthera_tigris_altaica
ENSPSIG00000012915	R3HDM1	100	78.791	ENSPTRG00000012494	R3HDM1	100	78.430	Pan_troglodytes
ENSPSIG00000012915	R3HDM1	100	79.024	ENSPANG00000026448	R3HDM1	100	78.662	Papio_anubis
ENSPSIG00000012915	R3HDM1	91	68.080	ENSPKIG00000004328	r3hdm1	96	68.250	Paramormyrops_kingsleyae
ENSPSIG00000012915	R3HDM1	100	74.934	ENSPEMG00000015187	R3hdm1	100	79.402	Peromyscus_maniculatus_bairdii
ENSPSIG00000012915	R3HDM1	87	43.288	ENSPMAG00000003369	-	99	42.843	Petromyzon_marinus
ENSPSIG00000012915	R3HDM1	100	81.307	ENSPCIG00000002491	R3HDM1	100	81.397	Phascolarctos_cinereus
ENSPSIG00000012915	R3HDM1	88	45.580	ENSPFOG00000015036	r3hdm1	99	45.783	Poecilia_formosa
ENSPSIG00000012915	R3HDM1	78	48.932	ENSPLAG00000018042	r3hdm1	94	48.977	Poecilia_latipinna
ENSPSIG00000012915	R3HDM1	78	48.984	ENSPMEG00000023947	r3hdm1	94	49.030	Poecilia_mexicana
ENSPSIG00000012915	R3HDM1	88	48.269	ENSPREG00000007902	r3hdm1	89	60.920	Poecilia_reticulata
ENSPSIG00000012915	R3HDM1	100	78.320	ENSPPYG00000012815	R3HDM1	100	77.958	Pongo_abelii
ENSPSIG00000012915	R3HDM1	100	67.786	ENSPCAG00000006208	R3HDM1	93	80.303	Procavia_capensis
ENSPSIG00000012915	R3HDM1	100	75.903	ENSPCOG00000012698	R3HDM1	100	75.903	Propithecus_coquereli
ENSPSIG00000012915	R3HDM1	95	76.580	ENSPVAG00000006098	R3HDM1	100	70.397	Pteropus_vampyrus
ENSPSIG00000012915	R3HDM1	63	40.656	ENSPNAG00000004162	arpp21	87	53.651	Pygocentrus_nattereri
ENSPSIG00000012915	R3HDM1	88	71.274	ENSPNAG00000013952	r3hdm1	94	71.196	Pygocentrus_nattereri
ENSPSIG00000012915	R3HDM1	83	76.282	ENSPNAG00000005436	R3HDM1	99	76.206	Pygocentrus_nattereri
ENSPSIG00000012915	R3HDM1	100	73.615	ENSRNOG00000004099	R3hdm1	100	73.680	Rattus_norvegicus
ENSPSIG00000012915	R3HDM1	100	78.069	ENSRBIG00000033317	R3HDM1	100	79.651	Rhinopithecus_bieti
ENSPSIG00000012915	R3HDM1	100	78.229	ENSRROG00000034534	R3HDM1	100	78.681	Rhinopithecus_roxellana
ENSPSIG00000012915	R3HDM1	100	78.933	ENSSBOG00000020389	R3HDM1	100	78.662	Saimiri_boliviensis_boliviensis
ENSPSIG00000012915	R3HDM1	100	81.677	ENSSHAG00000016999	R3HDM1	100	81.768	Sarcophilus_harrisii
ENSPSIG00000012915	R3HDM1	93	70.519	ENSSFOG00015014134	r3hdm1	100	71.359	Scleropages_formosus
ENSPSIG00000012915	R3HDM1	100	58.513	ENSSFOG00015019851	-	99	59.087	Scleropages_formosus
ENSPSIG00000012915	R3HDM1	99	44.045	ENSSMAG00000001669	r3hdm1	99	43.515	Scophthalmus_maximus
ENSPSIG00000012915	R3HDM1	88	47.053	ENSSDUG00000010749	r3hdm1	99	46.724	Seriola_dumerili
ENSPSIG00000012915	R3HDM1	99	46.580	ENSSLDG00000004499	r3hdm1	99	46.194	Seriola_lalandi_dorsalis
ENSPSIG00000012915	R3HDM1	70	72.093	ENSSARG00000000352	-	69	72.093	Sorex_araneus
ENSPSIG00000012915	R3HDM1	100	87.832	ENSSPUG00000004167	R3HDM1	100	87.832	Sphenodon_punctatus
ENSPSIG00000012915	R3HDM1	88	49.380	ENSSPAG00000004648	r3hdm1	99	49.360	Stegastes_partitus
ENSPSIG00000012915	R3HDM1	100	78.986	ENSSSCG00000015692	R3HDM1	100	78.986	Sus_scrofa
ENSPSIG00000012915	R3HDM1	100	80.201	ENSTGUG00000011750	R3HDM1	100	80.201	Taeniopygia_guttata
ENSPSIG00000012915	R3HDM1	80	46.793	ENSTRUG00000011654	r3hdm1	93	46.316	Takifugu_rubripes
ENSPSIG00000012915	R3HDM1	86	46.599	ENSTNIG00000010362	r3hdm1	99	45.808	Tetraodon_nigroviridis
ENSPSIG00000012915	R3HDM1	100	73.364	ENSTTRG00000003935	R3HDM1	100	73.364	Tursiops_truncatus
ENSPSIG00000012915	R3HDM1	70	80.026	ENSUAMG00000024806	R3HDM1	95	83.654	Ursus_americanus
ENSPSIG00000012915	R3HDM1	100	74.705	ENSUMAG00000005552	R3HDM1	100	74.796	Ursus_maritimus
ENSPSIG00000012915	R3HDM1	93	75.648	ENSVPAG00000007333	R3HDM1	93	75.648	Vicugna_pacos
ENSPSIG00000012915	R3HDM1	100	76.714	ENSVVUG00000006457	R3HDM1	100	76.538	Vulpes_vulpes
ENSPSIG00000012915	R3HDM1	89	69.756	ENSXETG00000019330	r3hdm1	100	69.857	Xenopus_tropicalis
ENSPSIG00000012915	R3HDM1	67	49.288	ENSXCOG00000017448	r3hdm1	94	49.547	Xiphophorus_couchianus
ENSPSIG00000012915	R3HDM1	88	46.499	ENSXMAG00000007885	r3hdm1	99	45.968	Xiphophorus_maculatus