EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000012965 (Gene tree)
Gene ID: 102454318
Gene Symbol: FUBP1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 34936 bases
Position: chrJH210520.1:844898-879833
Accession: 102454318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014596	KH_1	PF00013.29	7.4e-70	1	4
ENSPSIP00000014596	KH_1	PF00013.29	7.4e-70	2	4
ENSPSIP00000014596	KH_1	PF00013.29	7.4e-70	3	4
ENSPSIP00000014596	KH_1	PF00013.29	7.4e-70	4	4
ENSPSIP00000014601	KH_1	PF00013.29	8.7e-70	1	4
ENSPSIP00000014601	KH_1	PF00013.29	8.7e-70	2	4
ENSPSIP00000014601	KH_1	PF00013.29	8.7e-70	3	4
ENSPSIP00000014601	KH_1	PF00013.29	8.7e-70	4	4
ENSPSIP00000014596	KH_2	PF07650.17	3.1e-23	1	2
ENSPSIP00000014596	KH_2	PF07650.17	3.1e-23	2	2
ENSPSIP00000014601	KH_2	PF07650.17	3.6e-23	1	2
ENSPSIP00000014601	KH_2	PF07650.17	3.6e-23	2	2
ENSPSIP00000014596	DUF1897	PF09005.10	6.1e-12	1	2
ENSPSIP00000014596	DUF1897	PF09005.10	6.1e-12	2	2
ENSPSIP00000014601	DUF1897	PF09005.10	6.8e-12	1	2
ENSPSIP00000014601	DUF1897	PF09005.10	6.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014669	FUBP1-202	1833	-	ENSPSIP00000014601	610 (aa)	-	K7G2U0
ENSPSIT00000014664	FUBP1-201	2193	XM_006129588	ENSPSIP00000014596	591 (aa)	-	K7G2T5

Gene Model

Click here to download ENSPSIG00000012965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000012965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000012965	FUBP1	61	30.460	ENSPSIG00000014154	IGF2BP3	62	30.286
ENSPSIG00000012965	FUBP1	55	40.984	ENSPSIG00000011286	PCBP4	83	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000012965	FUBP1	100	96.627	ENSG00000162613	FUBP1	95	95.915	Homo_sapiens
ENSPSIG00000012965	FUBP1	99	71.980	ENSAPOG00000014845	fubp1	66	76.526	Acanthochromis_polyacanthus
ENSPSIG00000012965	FUBP1	100	93.182	ENSAMEG00000007372	FUBP1	92	93.182	Ailuropoda_melanoleuca
ENSPSIG00000012965	FUBP1	100	69.094	ENSACIG00000020024	fubp1	65	74.171	Amphilophus_citrinellus
ENSPSIG00000012965	FUBP1	100	68.558	ENSAPEG00000012232	fubp1	68	77.830	Amphiprion_percula
ENSPSIG00000012965	FUBP1	99	73.898	ENSATEG00000018619	fubp1	66	79.048	Anabas_testudineus
ENSPSIG00000012965	FUBP1	99	98.475	ENSAPLG00000005965	FUBP1	100	98.339	Anas_platyrhynchos
ENSPSIG00000012965	FUBP1	99	85.759	ENSACAG00000006310	FUBP1	92	88.479	Anolis_carolinensis
ENSPSIG00000012965	FUBP1	99	71.906	ENSACLG00000006708	fubp1	68	78.810	Astatotilapia_calliptera
ENSPSIG00000012965	FUBP1	92	76.866	ENSAMXG00000005525	fubp1	64	86.337	Astyanax_mexicanus
ENSPSIG00000012965	FUBP1	100	96.959	ENSCJAG00000007062	FUBP1	95	96.236	Callithrix_jacchus
ENSPSIG00000012965	FUBP1	100	96.796	ENSCAFG00000020361	FUBP1	95	96.078	Canis_familiaris
ENSPSIG00000012965	FUBP1	100	96.459	ENSTSYG00000000148	FUBP1	100	96.364	Carlito_syrichta
ENSPSIG00000012965	FUBP1	63	97.436	ENSCAPG00000011052	-	67	97.436	Cavia_aperea
ENSPSIG00000012965	FUBP1	99	96.134	ENSCPOG00000002757	FUBP1	98	96.599	Cavia_porcellus
ENSPSIG00000012965	FUBP1	73	91.241	ENSCCAG00000036537	FUBP1	82	89.051	Cebus_capucinus
ENSPSIG00000012965	FUBP1	100	96.627	ENSCATG00000042126	FUBP1	95	95.915	Cercocebus_atys
ENSPSIG00000012965	FUBP1	100	96.459	ENSCLAG00000005621	FUBP1	100	96.815	Chinchilla_lanigera
ENSPSIG00000012965	FUBP1	100	96.627	ENSCSAG00000001402	FUBP1	95	95.915	Chlorocebus_sabaeus
ENSPSIG00000012965	FUBP1	99	96.791	ENSCHOG00000008177	FUBP1	93	96.072	Choloepus_hoffmanni
ENSPSIG00000012965	FUBP1	100	95.973	ENSCGRG00001007103	Fubp1	93	95.973	Cricetulus_griseus_chok1gshd
ENSPSIG00000012965	FUBP1	100	95.973	ENSCGRG00000003372	Fubp1	100	95.888	Cricetulus_griseus_crigri
ENSPSIG00000012965	FUBP1	100	71.082	ENSCSEG00000021412	fubp1	65	77.857	Cynoglossus_semilaevis
ENSPSIG00000012965	FUBP1	99	70.827	ENSCVAG00000014487	fubp1	60	84.703	Cyprinodon_variegatus
ENSPSIG00000012965	FUBP1	69	77.855	ENSDARG00000029248	fubp1	67	77.726	Danio_rerio
ENSPSIG00000012965	FUBP1	74	69.231	ENSDNOG00000034565	-	69	67.937	Dasypus_novemcinctus
ENSPSIG00000012965	FUBP1	99	96.622	ENSDORG00000016534	Fubp1	93	95.908	Dipodomys_ordii
ENSPSIG00000012965	FUBP1	74	97.619	ENSETEG00000000948	-	53	96.166	Echinops_telfairi
ENSPSIG00000012965	FUBP1	90	46.416	ENSEBUG00000016143	fubp1	64	57.303	Eptatretus_burgeri
ENSPSIG00000012965	FUBP1	56	100.000	ENSEEUG00000001287	FUBP1	84	89.300	Erinaceus_europaeus
ENSPSIG00000012965	FUBP1	99	69.637	ENSELUG00000007990	fubp1	89	75.758	Esox_lucius
ENSPSIG00000012965	FUBP1	99	98.475	ENSFALG00000005768	FUBP1	93	97.537	Ficedula_albicollis
ENSPSIG00000012965	FUBP1	99	96.453	ENSFDAG00000014210	FUBP1	100	96.599	Fukomys_damarensis
ENSPSIG00000012965	FUBP1	100	71.567	ENSFHEG00000005230	fubp1	65	82.738	Fundulus_heteroclitus
ENSPSIG00000012965	FUBP1	100	67.258	ENSGMOG00000003370	fubp1	66	70.686	Gadus_morhua
ENSPSIG00000012965	FUBP1	100	98.314	ENSGALG00000008939	FUBP1	98	98.182	Gallus_gallus
ENSPSIG00000012965	FUBP1	100	70.317	ENSGAFG00000020972	fubp1	87	78.624	Gambusia_affinis
ENSPSIG00000012965	FUBP1	100	71.108	ENSGACG00000016563	fubp1	66	76.526	Gasterosteus_aculeatus
ENSPSIG00000012965	FUBP1	100	70.762	ENSHBUG00000009835	fubp1	80	77.435	Haplochromis_burtoni
ENSPSIG00000012965	FUBP1	69	92.195	ENSHGLG00000002808	-	67	89.976	Heterocephalus_glaber_female
ENSPSIG00000012965	FUBP1	100	96.141	ENSHGLG00000008415	-	100	96.815	Heterocephalus_glaber_female
ENSPSIG00000012965	FUBP1	69	92.439	ENSHGLG00100001414	-	67	90.692	Heterocephalus_glaber_male
ENSPSIG00000012965	FUBP1	100	96.141	ENSHGLG00100003417	-	92	96.141	Heterocephalus_glaber_male
ENSPSIG00000012965	FUBP1	100	69.085	ENSHCOG00000000910	fubp1	67	75.982	Hippocampus_comes
ENSPSIG00000012965	FUBP1	100	73.077	ENSIPUG00000009896	fubp1	66	79.196	Ictalurus_punctatus
ENSPSIG00000012965	FUBP1	100	96.796	ENSSTOG00000014312	FUBP1	95	96.223	Ictidomys_tridecemlineatus
ENSPSIG00000012965	FUBP1	100	96.303	ENSJJAG00000020069	Fubp1	100	96.599	Jaculus_jaculus
ENSPSIG00000012965	FUBP1	100	71.359	ENSKMAG00000018897	fubp1	65	77.857	Kryptolebias_marmoratus
ENSPSIG00000012965	FUBP1	99	67.767	ENSLBEG00000012700	fubp1	69	75.571	Labrus_bergylta
ENSPSIG00000012965	FUBP1	99	93.475	ENSLAFG00000003273	FUBP1	100	95.504	Loxodonta_africana
ENSPSIG00000012965	FUBP1	100	96.791	ENSMFAG00000031825	FUBP1	95	96.072	Macaca_fascicularis
ENSPSIG00000012965	FUBP1	100	96.627	ENSMMUG00000002899	FUBP1	95	95.915	Macaca_mulatta
ENSPSIG00000012965	FUBP1	100	96.627	ENSMNEG00000045212	FUBP1	95	95.915	Macaca_nemestrina
ENSPSIG00000012965	FUBP1	100	71.729	ENSMZEG00005024298	fubp1	66	79.245	Maylandia_zebra
ENSPSIG00000012965	FUBP1	100	97.976	ENSMGAG00000009424	FUBP1	100	97.851	Meleagris_gallopavo
ENSPSIG00000012965	FUBP1	99	95.966	ENSMAUG00000016428	Fubp1	98	96.599	Mesocricetus_auratus
ENSPSIG00000012965	FUBP1	99	96.134	ENSMOCG00000014751	Fubp1	98	96.599	Microtus_ochrogaster
ENSPSIG00000012965	FUBP1	92	74.141	ENSMMOG00000019463	fubp1	64	82.535	Mola_mola
ENSPSIG00000012965	FUBP1	69	86.364	ENSMODG00000020804	FUBP1	68	86.364	Monodelphis_domestica
ENSPSIG00000012965	FUBP1	100	71.036	ENSMALG00000015173	fubp1	66	77.857	Monopterus_albus
ENSPSIG00000012965	FUBP1	100	96.134	MGP_CAROLIEiJ_G0025740	Fubp1	98	96.599	Mus_caroli
ENSPSIG00000012965	FUBP1	100	95.798	ENSMUSG00000028034	Fubp1	98	95.918	Mus_musculus
ENSPSIG00000012965	FUBP1	100	96.134	MGP_PahariEiJ_G0027191	Fubp1	98	96.599	Mus_pahari
ENSPSIG00000012965	FUBP1	100	95.966	MGP_SPRETEiJ_G0026693	Fubp1	98	96.599	Mus_spretus
ENSPSIG00000012965	FUBP1	69	92.360	ENSMLUG00000014802	FUBP1	67	92.360	Myotis_lucifugus
ENSPSIG00000012965	FUBP1	98	96.239	ENSNGAG00000014302	Fubp1	98	96.599	Nannospalax_galili
ENSPSIG00000012965	FUBP1	100	69.984	ENSNBRG00000015099	fubp1	68	78.810	Neolamprologus_brichardi
ENSPSIG00000012965	FUBP1	100	90.924	ENSNLEG00000009772	FUBP1	65	91.489	Nomascus_leucogenys
ENSPSIG00000012965	FUBP1	90	91.045	ENSOPRG00000001175	FUBP1	84	88.806	Ochotona_princeps
ENSPSIG00000012965	FUBP1	99	96.622	ENSODEG00000002600	-	100	96.599	Octodon_degus
ENSPSIG00000012965	FUBP1	98	66.781	ENSODEG00000003657	-	66	67.780	Octodon_degus
ENSPSIG00000012965	FUBP1	99	71.129	ENSONIG00000018381	fubp1	66	79.245	Oreochromis_niloticus
ENSPSIG00000012965	FUBP1	97	92.092	ENSOANG00000009777	FUBP1	99	91.928	Ornithorhynchus_anatinus
ENSPSIG00000012965	FUBP1	99	68.387	ENSORLG00020005908	fubp1	67	77.619	Oryzias_latipes_hni
ENSPSIG00000012965	FUBP1	100	68.012	ENSORLG00015008779	fubp1	66	77.619	Oryzias_latipes_hsok
ENSPSIG00000012965	FUBP1	69	78.469	ENSOMEG00000021943	fubp1	66	76.429	Oryzias_melastigma
ENSPSIG00000012965	FUBP1	100	92.581	ENSOGAG00000014233	FUBP1	92	92.581	Otolemur_garnettii
ENSPSIG00000012965	FUBP1	100	93.791	ENSOARG00000013259	FUBP1	95	93.027	Ovis_aries
ENSPSIG00000012965	FUBP1	100	96.796	ENSPPRG00000000413	FUBP1	95	96.078	Panthera_pardus
ENSPSIG00000012965	FUBP1	100	96.796	ENSPTIG00000019450	FUBP1	95	96.078	Panthera_tigris_altaica
ENSPSIG00000012965	FUBP1	99	73.019	ENSPMGG00000009060	fubp1	67	77.934	Periophthalmus_magnuspinnatus
ENSPSIG00000012965	FUBP1	99	96.303	ENSPEMG00000021802	Fubp1	100	97.279	Peromyscus_maniculatus_bairdii
ENSPSIG00000012965	FUBP1	56	63.590	ENSPMAG00000001644	-	87	61.111	Petromyzon_marinus
ENSPSIG00000012965	FUBP1	100	69.444	ENSPLAG00000021170	fubp1	68	79.524	Poecilia_latipinna
ENSPSIG00000012965	FUBP1	99	72.881	ENSPMEG00000004747	fubp1	69	79.524	Poecilia_mexicana
ENSPSIG00000012965	FUBP1	99	71.812	ENSPREG00000017911	fubp1	63	84.164	Poecilia_reticulata
ENSPSIG00000012965	FUBP1	75	98.778	ENSPPYG00000001219	-	65	97.664	Pongo_abelii
ENSPSIG00000012965	FUBP1	99	96.791	ENSPCAG00000012617	FUBP1	93	96.072	Procavia_capensis
ENSPSIG00000012965	FUBP1	100	96.796	ENSPCOG00000024974	FUBP1	95	96.078	Propithecus_coquereli
ENSPSIG00000012965	FUBP1	69	90.736	ENSPVAG00000014637	FUBP1	64	90.736	Pteropus_vampyrus
ENSPSIG00000012965	FUBP1	100	71.498	ENSPNYG00000004552	fubp1	69	79.048	Pundamilia_nyererei
ENSPSIG00000012965	FUBP1	100	71.451	ENSPNAG00000016207	fubp1	83	77.367	Pygocentrus_nattereri
ENSPSIG00000012965	FUBP1	100	96.303	ENSRNOG00000043370	Fubp1	95	95.603	Rattus_norvegicus
ENSPSIG00000012965	FUBP1	100	96.627	ENSRBIG00000042950	FUBP1	95	95.915	Rhinopithecus_bieti
ENSPSIG00000012965	FUBP1	100	96.627	ENSRROG00000043534	FUBP1	95	95.915	Rhinopithecus_roxellana
ENSPSIG00000012965	FUBP1	100	96.796	ENSSBOG00000027299	FUBP1	98	96.798	Saimiri_boliviensis_boliviensis
ENSPSIG00000012965	FUBP1	99	95.966	ENSSHAG00000005367	FUBP1	100	96.926	Sarcophilus_harrisii
ENSPSIG00000012965	FUBP1	99	74.446	ENSSFOG00015010213	fubp1	66	80.095	Scleropages_formosus
ENSPSIG00000012965	FUBP1	100	69.632	ENSSDUG00000007383	fubp1	65	77.262	Seriola_dumerili
ENSPSIG00000012965	FUBP1	100	70.159	ENSSLDG00000022863	fubp1	68	77.069	Seriola_lalandi_dorsalis
ENSPSIG00000012965	FUBP1	69	100.000	ENSSARG00000011730	FUBP1	51	100.000	Sorex_araneus
ENSPSIG00000012965	FUBP1	99	87.541	ENSSPUG00000008389	FUBP1	92	90.779	Sphenodon_punctatus
ENSPSIG00000012965	FUBP1	99	73.356	ENSSPAG00000010161	fubp1	65	78.571	Stegastes_partitus
ENSPSIG00000012965	FUBP1	99	97.483	ENSTGUG00000006841	FUBP1	100	97.204	Taeniopygia_guttata
ENSPSIG00000012965	FUBP1	100	66.717	ENSTRUG00000004615	fubp1	61	78.810	Takifugu_rubripes
ENSPSIG00000012965	FUBP1	55	83.784	ENSTNIG00000019815	-	87	83.784	Tetraodon_nigroviridis
ENSPSIG00000012965	FUBP1	86	100.000	ENSTBEG00000017333	FUBP1	65	100.000	Tupaia_belangeri
ENSPSIG00000012965	FUBP1	99	96.791	ENSTTRG00000000096	FUBP1	93	96.072	Tursiops_truncatus
ENSPSIG00000012965	FUBP1	99	96.791	ENSVPAG00000004709	FUBP1	94	96.072	Vicugna_pacos
ENSPSIG00000012965	FUBP1	100	69.722	ENSXCOG00000019354	fubp1	68	77.857	Xiphophorus_couchianus
ENSPSIG00000012965	FUBP1	96	75.047	ENSXMAG00000007168	fubp1	69	79.286	Xiphophorus_maculatus