EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000013143 (Gene tree)
Gene ID: 102463951
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11A-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 18662 bases
Position: chrJH206249.1:1751109-1769770
Accession: 102463951
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000014671	MMR_HSR1	PF01926.23	2.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000014740	-	2400	XM_006113901	ENSPSIP00000014671	216 (aa)	XP_006113963	K7G310

Gene Model

Click here to download ENSPSIG00000013143's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000013143	-	82	35.912	ENSPSIG00000008757	-	93	35.912
ENSPSIG00000013143	-	75	31.707	ENSPSIG00000010115	RHEB	89	31.707
ENSPSIG00000013143	-	81	40.909	ENSPSIG00000003078	RAB30	87	40.909
ENSPSIG00000013143	-	73	39.264	ENSPSIG00000011514	RAB7A	78	39.264
ENSPSIG00000013143	-	55	32.520	ENSPSIG00000000003	ARL4A	60	32.520
ENSPSIG00000013143	-	73	43.312	ENSPSIG00000009912	RAB22A	81	43.312
ENSPSIG00000013143	-	96	44.712	ENSPSIG00000008028	RAB1A	98	44.712
ENSPSIG00000013143	-	79	34.503	ENSPSIG00000014041	-	73	34.503
ENSPSIG00000013143	-	78	39.884	ENSPSIG00000001871	RAB9B	86	39.884
ENSPSIG00000013143	-	75	30.814	ENSPSIG00000011613	RASL11A	72	30.814
ENSPSIG00000013143	-	99	77.570	ENSPSIG00000011930	RAB11A	97	79.048
ENSPSIG00000013143	-	72	35.032	ENSPSIG00000015579	RAB23	68	34.783
ENSPSIG00000013143	-	58	31.783	ENSPSIG00000000594	ARL4D	63	31.783
ENSPSIG00000013143	-	94	44.118	ENSPSIG00000007157	RAB5A	91	44.118
ENSPSIG00000013143	-	75	42.857	ENSPSIG00000009095	RAB31	83	42.857
ENSPSIG00000013143	-	83	44.751	ENSPSIG00000009419	RAB39B	85	44.751
ENSPSIG00000013143	-	94	30.732	ENSPSIG00000003388	RAB7B	96	30.732
ENSPSIG00000013143	-	78	39.181	ENSPSIG00000006606	-	85	39.181
ENSPSIG00000013143	-	66	38.028	ENSPSIG00000002522	-	92	38.028
ENSPSIG00000013143	-	75	34.940	ENSPSIG00000003221	RERG	81	34.940
ENSPSIG00000013143	-	70	38.562	ENSPSIG00000012698	-	89	38.562
ENSPSIG00000013143	-	72	41.250	ENSPSIG00000000469	RAB9A	79	41.250
ENSPSIG00000013143	-	84	38.251	ENSPSIG00000006831	RAB42	82	38.251
ENSPSIG00000013143	-	60	30.000	ENSPSIG00000015164	RRAS2	75	30.000
ENSPSIG00000013143	-	86	43.011	ENSPSIG00000016995	RAB17	78	43.011
ENSPSIG00000013143	-	98	75.455	ENSPSIG00000010242	-	85	75.455
ENSPSIG00000013143	-	70	34.868	ENSPSIG00000014690	HRAS	85	35.976
ENSPSIG00000013143	-	77	52.096	ENSPSIG00000003919	RAB14	78	52.096
ENSPSIG00000013143	-	91	47.716	ENSPSIG00000011994	RAB2A	99	45.413
ENSPSIG00000013143	-	70	34.211	ENSPSIG00000015077	-	86	35.366
ENSPSIG00000013143	-	72	30.380	ENSPSIG00000009592	MRAS	81	31.765
ENSPSIG00000013143	-	100	60.648	ENSPSIG00000013051	RAB25	100	60.648
ENSPSIG00000013143	-	93	32.701	ENSPSIG00000009545	RAB36	78	32.701

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013143	-	99	80.000	ENSAPOG00000008251	rab11al	99	80.000	Acanthochromis_polyacanthus
ENSPSIG00000013143	-	99	78.605	ENSACIG00000017403	rab11al	99	78.605	Amphilophus_citrinellus
ENSPSIG00000013143	-	99	79.439	ENSAOCG00000015678	rab11al	99	79.439	Amphiprion_ocellaris
ENSPSIG00000013143	-	99	79.439	ENSAPEG00000022135	rab11al	99	79.439	Amphiprion_percula
ENSPSIG00000013143	-	99	78.972	ENSATEG00000006156	rab11al	99	78.972	Anabas_testudineus
ENSPSIG00000013143	-	99	79.070	ENSACLG00000010268	rab11al	99	79.070	Astatotilapia_calliptera
ENSPSIG00000013143	-	94	77.723	ENSAMXG00000024632	rab11al	92	77.723	Astyanax_mexicanus
ENSPSIG00000013143	-	94	96.059	ENSCPBG00000025819	-	99	96.059	Chrysemys_picta_bellii
ENSPSIG00000013143	-	99	79.535	ENSCSEG00000011996	rab11al	99	79.535	Cynoglossus_semilaevis
ENSPSIG00000013143	-	99	79.535	ENSCVAG00000020016	rab11al	99	79.535	Cyprinodon_variegatus
ENSPSIG00000013143	-	99	81.860	ENSDARG00000014340	rab11al	99	81.860	Danio_rerio
ENSPSIG00000013143	-	99	79.535	ENSELUG00000012035	rab11al	99	79.535	Esox_lucius
ENSPSIG00000013143	-	100	89.352	ENSFALG00000002594	-	92	89.352	Ficedula_albicollis
ENSPSIG00000013143	-	94	82.353	ENSFHEG00000000832	rab11al	98	82.353	Fundulus_heteroclitus
ENSPSIG00000013143	-	93	78.607	ENSGMOG00000006450	rab11al	99	78.607	Gadus_morhua
ENSPSIG00000013143	-	100	85.648	ENSGALG00000037802	-	50	85.648	Gallus_gallus
ENSPSIG00000013143	-	99	80.930	ENSGAFG00000021725	rab11al	99	80.930	Gambusia_affinis
ENSPSIG00000013143	-	99	78.605	ENSGACG00000013259	rab11al	99	78.605	Gasterosteus_aculeatus
ENSPSIG00000013143	-	100	97.222	ENSGAGG00000020702	-	100	97.222	Gopherus_agassizii
ENSPSIG00000013143	-	99	79.070	ENSHBUG00000009333	rab11al	99	79.070	Haplochromis_burtoni
ENSPSIG00000013143	-	99	78.605	ENSHCOG00000000232	rab11al	99	78.605	Hippocampus_comes
ENSPSIG00000013143	-	99	80.000	ENSIPUG00000006091	RAB11A	99	80.000	Ictalurus_punctatus
ENSPSIG00000013143	-	99	79.070	ENSKMAG00000015516	rab11al	99	79.070	Kryptolebias_marmoratus
ENSPSIG00000013143	-	99	79.535	ENSLBEG00000016417	rab11al	99	79.535	Labrus_bergylta
ENSPSIG00000013143	-	99	81.395	ENSLACG00000011380	rab11al	99	81.395	Latimeria_chalumnae
ENSPSIG00000013143	-	99	81.308	ENSLOCG00000008865	rab11al	99	81.308	Lepisosteus_oculatus
ENSPSIG00000013143	-	99	79.070	ENSMAMG00000010278	rab11al	99	79.070	Mastacembelus_armatus
ENSPSIG00000013143	-	99	79.070	ENSMZEG00005017514	rab11al	99	79.070	Maylandia_zebra
ENSPSIG00000013143	-	74	93.125	ENSMGAG00000004720	-	95	93.125	Meleagris_gallopavo
ENSPSIG00000013143	-	78	90.533	ENSMMOG00000017117	rab11al	83	90.533	Mola_mola
ENSPSIG00000013143	-	99	78.140	ENSMALG00000004093	rab11al	99	78.140	Monopterus_albus
ENSPSIG00000013143	-	99	79.070	ENSNBRG00000005116	rab11al	99	79.070	Neolamprologus_brichardi
ENSPSIG00000013143	-	99	78.605	ENSONIG00000002281	rab11al	99	78.605	Oreochromis_niloticus
ENSPSIG00000013143	-	99	79.070	ENSORLG00000016126	rab11al	99	79.070	Oryzias_latipes
ENSPSIG00000013143	-	99	79.070	ENSORLG00020013747	rab11al	99	79.070	Oryzias_latipes_hni
ENSPSIG00000013143	-	99	79.070	ENSORLG00015019591	rab11al	99	79.070	Oryzias_latipes_hsok
ENSPSIG00000013143	-	99	79.439	ENSOMEG00000020271	rab11al	99	79.439	Oryzias_melastigma
ENSPSIG00000013143	-	99	78.505	ENSPKIG00000020893	rab11al	99	78.505	Paramormyrops_kingsleyae
ENSPSIG00000013143	-	99	79.439	ENSPMGG00000004220	rab11al	89	92.537	Periophthalmus_magnuspinnatus
ENSPSIG00000013143	-	99	80.930	ENSPFOG00000011316	rab11al	99	80.930	Poecilia_formosa
ENSPSIG00000013143	-	99	80.930	ENSPLAG00000007986	rab11al	99	80.930	Poecilia_latipinna
ENSPSIG00000013143	-	99	80.930	ENSPMEG00000000804	rab11al	99	80.930	Poecilia_mexicana
ENSPSIG00000013143	-	99	80.930	ENSPREG00000017324	rab11al	99	80.930	Poecilia_reticulata
ENSPSIG00000013143	-	99	79.070	ENSPNYG00000018244	rab11al	99	79.070	Pundamilia_nyererei
ENSPSIG00000013143	-	99	81.395	ENSPNAG00000029085	rab11al	99	81.395	Pygocentrus_nattereri
ENSPSIG00000013143	-	99	78.972	ENSSFOG00015008618	rab11al	99	78.972	Scleropages_formosus
ENSPSIG00000013143	-	99	78.605	ENSSMAG00000016206	rab11al	99	78.605	Scophthalmus_maximus
ENSPSIG00000013143	-	99	78.605	ENSSDUG00000006278	rab11al	99	78.605	Seriola_dumerili
ENSPSIG00000013143	-	99	78.605	ENSSLDG00000012116	rab11al	99	78.605	Seriola_lalandi_dorsalis
ENSPSIG00000013143	-	100	87.558	ENSSPUG00000002526	-	100	87.558	Sphenodon_punctatus
ENSPSIG00000013143	-	99	78.605	ENSSPAG00000012044	rab11al	99	78.605	Stegastes_partitus
ENSPSIG00000013143	-	94	91.626	ENSTGUG00000003680	-	100	91.626	Taeniopygia_guttata
ENSPSIG00000013143	-	98	78.774	ENSTRUG00000007556	rab11al	94	90.345	Takifugu_rubripes
ENSPSIG00000013143	-	99	80.465	ENSXCOG00000004226	rab11al	99	80.465	Xiphophorus_couchianus
ENSPSIG00000013143	-	99	80.465	ENSXMAG00000027071	rab11al	99	80.465	Xiphophorus_maculatus