EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000013275 (Gene tree)
Gene ID: 102445355
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 30068 bases
Position: chrJH204862.1:327073-357140
Accession: 102445355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015016	CPSF_A	PF03178.15	9e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015087	DDB1-201	7039	XM_006110324	ENSPSIP00000015016	1124 (aa)	-	K7G405

Gene Model

Click here to download ENSPSIG00000013275's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03420	Nucleotide excision repair	KEGG
pss04120	Ubiquitin mediated proteolysis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013275	DDB1	100	96.975	ENSG00000167986	DDB1	100	97.576	Homo_sapiens
ENSPSIG00000013275	DDB1	98	90.255	ENSAPOG00000005036	ddb1	98	90.249	Acanthochromis_polyacanthus
ENSPSIG00000013275	DDB1	100	97.064	ENSAMEG00000016518	DDB1	98	97.064	Ailuropoda_melanoleuca
ENSPSIG00000013275	DDB1	86	90.560	ENSACIG00000020624	ddb1	98	90.560	Amphilophus_citrinellus
ENSPSIG00000013275	DDB1	100	90.302	ENSAOCG00000003066	ddb1	98	90.302	Amphiprion_ocellaris
ENSPSIG00000013275	DDB1	100	90.391	ENSAPEG00000000092	ddb1	98	90.391	Amphiprion_percula
ENSPSIG00000013275	DDB1	94	90.557	ENSATEG00000020571	ddb1	96	90.557	Anabas_testudineus
ENSPSIG00000013275	DDB1	100	96.983	ENSAPLG00000007174	DDB1	99	96.983	Anas_platyrhynchos
ENSPSIG00000013275	DDB1	100	97.509	ENSACAG00000017758	DDB1	98	97.509	Anolis_carolinensis
ENSPSIG00000013275	DDB1	100	96.975	ENSANAG00000021878	DDB1	98	96.975	Aotus_nancymaae
ENSPSIG00000013275	DDB1	100	90.658	ENSACLG00000012401	ddb1	98	90.658	Astatotilapia_calliptera
ENSPSIG00000013275	DDB1	100	97.064	ENSBTAG00000021569	DDB1	92	97.064	Bos_taurus
ENSPSIG00000013275	DDB1	100	37.121	WBGene00010890	ddb-1	98	37.034	Caenorhabditis_elegans
ENSPSIG00000013275	DDB1	100	96.975	ENSCJAG00000019319	DDB1	98	96.975	Callithrix_jacchus
ENSPSIG00000013275	DDB1	100	97.064	ENSCAFG00000016264	DDB1	98	97.064	Canis_familiaris
ENSPSIG00000013275	DDB1	94	96.884	ENSCAFG00020012722	DDB1	98	96.884	Canis_lupus_dingo
ENSPSIG00000013275	DDB1	100	97.064	ENSCHIG00000014969	DDB1	98	97.064	Capra_hircus
ENSPSIG00000013275	DDB1	100	96.619	ENSTSYG00000008027	DDB1	98	96.619	Carlito_syrichta
ENSPSIG00000013275	DDB1	99	96.789	ENSCAPG00000010786	DDB1	100	96.789	Cavia_aperea
ENSPSIG00000013275	DDB1	100	96.619	ENSCPOG00000009956	DDB1	98	96.619	Cavia_porcellus
ENSPSIG00000013275	DDB1	100	96.975	ENSCCAG00000035883	DDB1	98	96.975	Cebus_capucinus
ENSPSIG00000013275	DDB1	100	94.454	ENSCATG00000044495	DDB1	98	94.454	Cercocebus_atys
ENSPSIG00000013275	DDB1	100	96.530	ENSCLAG00000004126	DDB1	98	96.530	Chinchilla_lanigera
ENSPSIG00000013275	DDB1	100	96.975	ENSCSAG00000006392	DDB1	98	96.975	Chlorocebus_sabaeus
ENSPSIG00000013275	DDB1	87	90.943	ENSCHOG00000011377	DDB1	88	90.943	Choloepus_hoffmanni
ENSPSIG00000013275	DDB1	100	98.843	ENSCPBG00000017728	DDB1	98	98.843	Chrysemys_picta_bellii
ENSPSIG00000013275	DDB1	100	61.444	ENSCING00000007437	-	98	61.356	Ciona_intestinalis
ENSPSIG00000013275	DDB1	95	60.294	ENSCSAVG00000004783	-	100	60.294	Ciona_savignyi
ENSPSIG00000013275	DDB1	100	96.975	ENSCANG00000019948	DDB1	98	96.975	Colobus_angolensis_palliatus
ENSPSIG00000013275	DDB1	100	97.064	ENSCGRG00001016599	Ddb1	98	97.064	Cricetulus_griseus_chok1gshd
ENSPSIG00000013275	DDB1	100	97.064	ENSCGRG00000013427	Ddb1	98	97.064	Cricetulus_griseus_crigri
ENSPSIG00000013275	DDB1	93	90.335	ENSCSEG00000012499	ddb1	98	88.683	Cynoglossus_semilaevis
ENSPSIG00000013275	DDB1	94	90.350	ENSCVAG00000019531	ddb1	98	90.350	Cyprinodon_variegatus
ENSPSIG00000013275	DDB1	100	87.744	ENSDARG00000074431	ddb1	98	87.865	Danio_rerio
ENSPSIG00000013275	DDB1	94	96.601	ENSDNOG00000014884	DDB1	96	96.601	Dasypus_novemcinctus
ENSPSIG00000013275	DDB1	84	96.552	ENSDORG00000000127	Ddb1	98	96.552	Dipodomys_ordii
ENSPSIG00000013275	DDB1	100	60.762	FBgn0260962	pic	98	60.550	Drosophila_melanogaster
ENSPSIG00000013275	DDB1	71	97.034	ENSETEG00000001053	-	69	97.034	Echinops_telfairi
ENSPSIG00000013275	DDB1	78	83.849	ENSEBUG00000014593	ddb1	95	83.849	Eptatretus_burgeri
ENSPSIG00000013275	DDB1	100	96.886	ENSEASG00005008184	DDB1	98	96.886	Equus_asinus_asinus
ENSPSIG00000013275	DDB1	100	96.975	ENSECAG00000012136	DDB1	98	96.975	Equus_caballus
ENSPSIG00000013275	DDB1	80	94.631	ENSEEUG00000003194	DDB1	79	94.631	Erinaceus_europaeus
ENSPSIG00000013275	DDB1	100	90.302	ENSELUG00000023868	ddb1	98	90.302	Esox_lucius
ENSPSIG00000013275	DDB1	100	97.064	ENSFCAG00000029716	DDB1	98	97.064	Felis_catus
ENSPSIG00000013275	DDB1	99	97.425	ENSFALG00000011981	DDB1	98	97.425	Ficedula_albicollis
ENSPSIG00000013275	DDB1	100	96.619	ENSFDAG00000005128	DDB1	98	96.619	Fukomys_damarensis
ENSPSIG00000013275	DDB1	90	91.765	ENSFHEG00000022133	ddb1	96	91.765	Fundulus_heteroclitus
ENSPSIG00000013275	DDB1	80	94.314	ENSGMOG00000019386	ddb1	94	94.314	Gadus_morhua
ENSPSIG00000013275	DDB1	100	97.331	ENSGALG00000042333	DDB1	98	97.331	Gallus_gallus
ENSPSIG00000013275	DDB1	94	90.066	ENSGAFG00000013142	ddb1	98	90.066	Gambusia_affinis
ENSPSIG00000013275	DDB1	96	89.395	ENSGACG00000017182	ddb1	98	89.395	Gasterosteus_aculeatus
ENSPSIG00000013275	DDB1	97	99.263	ENSGAGG00000014124	DDB1	100	99.263	Gopherus_agassizii
ENSPSIG00000013275	DDB1	100	96.975	ENSGGOG00000004052	DDB1	98	96.975	Gorilla_gorilla
ENSPSIG00000013275	DDB1	100	90.658	ENSHBUG00000008873	ddb1	100	90.608	Haplochromis_burtoni
ENSPSIG00000013275	DDB1	100	96.619	ENSHGLG00000018430	DDB1	98	96.619	Heterocephalus_glaber_female
ENSPSIG00000013275	DDB1	100	95.552	ENSHGLG00100014475	DDB1	98	95.552	Heterocephalus_glaber_male
ENSPSIG00000013275	DDB1	94	90.000	ENSHCOG00000018670	ddb1	97	90.000	Hippocampus_comes
ENSPSIG00000013275	DDB1	100	89.769	ENSIPUG00000005612	DDB1	98	89.769	Ictalurus_punctatus
ENSPSIG00000013275	DDB1	100	96.975	ENSSTOG00000007552	DDB1	98	96.975	Ictidomys_tridecemlineatus
ENSPSIG00000013275	DDB1	100	96.975	ENSJJAG00000017769	Ddb1	98	96.975	Jaculus_jaculus
ENSPSIG00000013275	DDB1	94	90.161	ENSKMAG00000002315	ddb1	98	90.161	Kryptolebias_marmoratus
ENSPSIG00000013275	DDB1	86	90.644	ENSLBEG00000017065	ddb1	99	90.644	Labrus_bergylta
ENSPSIG00000013275	DDB1	100	93.606	ENSLACG00000017611	DDB1	98	93.606	Latimeria_chalumnae
ENSPSIG00000013275	DDB1	92	82.416	ENSLOCG00000000012	ddb1	98	82.416	Lepisosteus_oculatus
ENSPSIG00000013275	DDB1	100	96.797	ENSLAFG00000011513	DDB1	98	96.797	Loxodonta_africana
ENSPSIG00000013275	DDB1	100	96.975	ENSMFAG00000042035	DDB1	98	96.975	Macaca_fascicularis
ENSPSIG00000013275	DDB1	99	97.040	ENSMMUG00000002691	DDB1	98	97.040	Macaca_mulatta
ENSPSIG00000013275	DDB1	100	96.975	ENSMNEG00000031559	DDB1	98	96.975	Macaca_nemestrina
ENSPSIG00000013275	DDB1	100	96.975	ENSMLEG00000044136	DDB1	98	96.975	Mandrillus_leucophaeus
ENSPSIG00000013275	DDB1	100	90.747	ENSMAMG00000014372	ddb1	98	90.747	Mastacembelus_armatus
ENSPSIG00000013275	DDB1	100	90.569	ENSMZEG00005013835	ddb1	98	90.569	Maylandia_zebra
ENSPSIG00000013275	DDB1	95	97.119	ENSMGAG00000004990	DDB1	100	97.119	Meleagris_gallopavo
ENSPSIG00000013275	DDB1	100	97.064	ENSMAUG00000012926	Ddb1	98	97.064	Mesocricetus_auratus
ENSPSIG00000013275	DDB1	100	96.975	ENSMICG00000013703	DDB1	98	96.975	Microcebus_murinus
ENSPSIG00000013275	DDB1	100	96.975	ENSMOCG00000020499	Ddb1	98	96.975	Microtus_ochrogaster
ENSPSIG00000013275	DDB1	86	90.353	ENSMMOG00000001758	ddb1	98	90.353	Mola_mola
ENSPSIG00000013275	DDB1	100	87.719	ENSMODG00000020353	DDB1	98	87.719	Monodelphis_domestica
ENSPSIG00000013275	DDB1	100	90.658	ENSMALG00000014071	ddb1	98	90.658	Monopterus_albus
ENSPSIG00000013275	DDB1	100	97.064	MGP_CAROLIEiJ_G0022695	Ddb1	98	97.064	Mus_caroli
ENSPSIG00000013275	DDB1	100	96.975	ENSMUSG00000024740	Ddb1	98	96.975	Mus_musculus
ENSPSIG00000013275	DDB1	100	97.064	MGP_PahariEiJ_G0014189	Ddb1	98	97.064	Mus_pahari
ENSPSIG00000013275	DDB1	100	97.064	MGP_SPRETEiJ_G0023609	Ddb1	98	97.064	Mus_spretus
ENSPSIG00000013275	DDB1	100	93.772	ENSMPUG00000014200	DDB1	98	93.772	Mustela_putorius_furo
ENSPSIG00000013275	DDB1	100	96.975	ENSMLUG00000013232	DDB1	98	96.975	Myotis_lucifugus
ENSPSIG00000013275	DDB1	100	96.797	ENSNGAG00000009384	Ddb1	98	96.797	Nannospalax_galili
ENSPSIG00000013275	DDB1	100	90.747	ENSNBRG00000019581	ddb1	98	90.747	Neolamprologus_brichardi
ENSPSIG00000013275	DDB1	100	93.838	ENSNLEG00000002022	DDB1	98	93.838	Nomascus_leucogenys
ENSPSIG00000013275	DDB1	91	97.887	ENSMEUG00000001099	DDB1	92	97.887	Notamacropus_eugenii
ENSPSIG00000013275	DDB1	92	88.867	ENSOPRG00000008254	DDB1	90	88.867	Ochotona_princeps
ENSPSIG00000013275	DDB1	100	96.263	ENSODEG00000002419	DDB1	98	96.263	Octodon_degus
ENSPSIG00000013275	DDB1	100	90.658	ENSONIG00000005804	ddb1	98	90.658	Oreochromis_niloticus
ENSPSIG00000013275	DDB1	92	97.582	ENSOANG00000004897	DDB1	100	97.582	Ornithorhynchus_anatinus
ENSPSIG00000013275	DDB1	100	96.975	ENSOCUG00000001667	DDB1	98	96.975	Oryctolagus_cuniculus
ENSPSIG00000013275	DDB1	96	88.837	ENSORLG00000001399	ddb1	96	90.049	Oryzias_latipes
ENSPSIG00000013275	DDB1	96	88.744	ENSORLG00020001277	ddb1	95	88.744	Oryzias_latipes_hni
ENSPSIG00000013275	DDB1	94	89.896	ENSORLG00015002080	ddb1	97	89.896	Oryzias_latipes_hsok
ENSPSIG00000013275	DDB1	96	88.714	ENSOMEG00000006181	ddb1	98	88.714	Oryzias_melastigma
ENSPSIG00000013275	DDB1	100	97.064	ENSOGAG00000016103	DDB1	98	97.064	Otolemur_garnettii
ENSPSIG00000013275	DDB1	98	97.200	ENSOARG00000011716	DDB1	96	97.200	Ovis_aries
ENSPSIG00000013275	DDB1	100	96.975	ENSPPAG00000035343	DDB1	98	96.975	Pan_paniscus
ENSPSIG00000013275	DDB1	100	97.064	ENSPPRG00000013300	DDB1	98	97.064	Panthera_pardus
ENSPSIG00000013275	DDB1	99	97.235	ENSPTIG00000006909	DDB1	98	97.235	Panthera_tigris_altaica
ENSPSIG00000013275	DDB1	100	96.975	ENSPTRG00000003737	DDB1	98	96.975	Pan_troglodytes
ENSPSIG00000013275	DDB1	100	96.975	ENSPANG00000000242	DDB1	98	96.975	Papio_anubis
ENSPSIG00000013275	DDB1	94	90.350	ENSPKIG00000019213	ddb1	92	90.350	Paramormyrops_kingsleyae
ENSPSIG00000013275	DDB1	86	90.249	ENSPMGG00000021179	ddb1	98	90.249	Periophthalmus_magnuspinnatus
ENSPSIG00000013275	DDB1	100	97.064	ENSPEMG00000012241	Ddb1	98	97.064	Peromyscus_maniculatus_bairdii
ENSPSIG00000013275	DDB1	91	86.176	ENSPMAG00000008479	ddb1	100	86.176	Petromyzon_marinus
ENSPSIG00000013275	DDB1	100	97.420	ENSPCIG00000002643	DDB1	98	97.420	Phascolarctos_cinereus
ENSPSIG00000013275	DDB1	100	90.044	ENSPFOG00000002768	ddb1	98	90.044	Poecilia_formosa
ENSPSIG00000013275	DDB1	100	89.858	ENSPLAG00000017227	ddb1	98	89.858	Poecilia_latipinna
ENSPSIG00000013275	DDB1	100	89.858	ENSPMEG00000011398	ddb1	98	89.858	Poecilia_mexicana
ENSPSIG00000013275	DDB1	94	90.179	ENSPREG00000004440	ddb1	96	90.179	Poecilia_reticulata
ENSPSIG00000013275	DDB1	100	92.124	ENSPPYG00000003193	DDB1	98	92.124	Pongo_abelii
ENSPSIG00000013275	DDB1	84	96.429	ENSPCAG00000011040	DDB1	83	96.429	Procavia_capensis
ENSPSIG00000013275	DDB1	100	95.471	ENSPCOG00000015176	DDB1	98	95.471	Propithecus_coquereli
ENSPSIG00000013275	DDB1	100	96.886	ENSPVAG00000003847	DDB1	98	96.886	Pteropus_vampyrus
ENSPSIG00000013275	DDB1	50	90.071	ENSPNYG00000010482	ddb1	100	90.071	Pundamilia_nyererei
ENSPSIG00000013275	DDB1	94	90.350	ENSPNAG00000006635	ddb1	95	90.350	Pygocentrus_nattereri
ENSPSIG00000013275	DDB1	100	96.975	ENSRNOG00000020715	Ddb1	98	96.975	Rattus_norvegicus
ENSPSIG00000013275	DDB1	100	96.975	ENSRBIG00000033611	DDB1	98	97.040	Rhinopithecus_bieti
ENSPSIG00000013275	DDB1	100	96.975	ENSRROG00000041407	DDB1	98	96.975	Rhinopithecus_roxellana
ENSPSIG00000013275	DDB1	100	97.064	ENSSBOG00000019775	DDB1	98	97.064	Saimiri_boliviensis_boliviensis
ENSPSIG00000013275	DDB1	95	95.709	ENSSHAG00000011600	DDB1	100	95.709	Sarcophilus_harrisii
ENSPSIG00000013275	DDB1	94	90.755	ENSSFOG00015011151	ddb1	95	90.755	Scleropages_formosus
ENSPSIG00000013275	DDB1	100	90.302	ENSSMAG00000009495	ddb1	98	90.302	Scophthalmus_maximus
ENSPSIG00000013275	DDB1	100	90.569	ENSSDUG00000004642	ddb1	98	90.569	Seriola_dumerili
ENSPSIG00000013275	DDB1	100	90.569	ENSSLDG00000015804	ddb1	98	90.569	Seriola_lalandi_dorsalis
ENSPSIG00000013275	DDB1	65	100.000	ENSSARG00000003290	-	66	100.000	Sorex_araneus
ENSPSIG00000013275	DDB1	100	98.310	ENSSPUG00000019338	DDB1	98	98.310	Sphenodon_punctatus
ENSPSIG00000013275	DDB1	94	90.463	ENSSPAG00000009888	ddb1	97	90.463	Stegastes_partitus
ENSPSIG00000013275	DDB1	100	96.085	ENSSSCG00000013094	DDB1	98	96.085	Sus_scrofa
ENSPSIG00000013275	DDB1	100	97.153	ENSTGUG00000006414	DDB1	98	97.153	Taeniopygia_guttata
ENSPSIG00000013275	DDB1	94	89.120	ENSTRUG00000016682	ddb1	97	89.120	Takifugu_rubripes
ENSPSIG00000013275	DDB1	89	84.861	ENSTNIG00000009565	ddb1	99	84.861	Tetraodon_nigroviridis
ENSPSIG00000013275	DDB1	94	92.057	ENSTTRG00000011055	DDB1	94	92.057	Tursiops_truncatus
ENSPSIG00000013275	DDB1	94	96.884	ENSUAMG00000017793	DDB1	92	96.884	Ursus_americanus
ENSPSIG00000013275	DDB1	94	96.884	ENSUMAG00000011788	DDB1	96	96.884	Ursus_maritimus
ENSPSIG00000013275	DDB1	91	97.059	ENSVPAG00000007963	DDB1	92	97.059	Vicugna_pacos
ENSPSIG00000013275	DDB1	100	96.975	ENSVVUG00000004987	DDB1	98	96.975	Vulpes_vulpes
ENSPSIG00000013275	DDB1	100	92.199	ENSXETG00000008820	ddb1	98	92.199	Xenopus_tropicalis
ENSPSIG00000013275	DDB1	86	90.041	ENSXCOG00000013956	ddb1	98	90.041	Xiphophorus_couchianus
ENSPSIG00000013275	DDB1	94	90.066	ENSXMAG00000000022	ddb1	98	90.066	Xiphophorus_maculatus