EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000013393 (Gene tree)
Gene ID: 102445739
Gene Symbol: PRPF8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 27328 bases
Position: chrJH209736.1:379216-406543
Accession: 102445739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015324	RRM_4	PF10598.9	2.3e-48	1	1
ENSPSIP00000015324	U5_2-snRNA_bdg	PF10597.9	4.6e-74	1	1
ENSPSIP00000015324	PRO8NT	PF08082.11	9.4e-87	1	1
ENSPSIP00000015324	U6-snRNA_bdg	PF10596.9	1.1e-89	1	1
ENSPSIP00000015324	PROCN	PF08083.11	5.7e-237	1	1
ENSPSIP00000015324	PRP8_domainIV	PF12134.8	2.6e-130	1	1
ENSPSIP00000015324	PROCT	PF08084.11	4.9e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015396	PRPF8-201	7765	XM_006127030	ENSPSIP00000015324	2335 (aa)	XP_006127092	K7G4W3

Gene Model

Click here to download ENSPSIG00000013393's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013393	PRPF8	100	99.486	ENSG00000174231	PRPF8	100	99.486	Homo_sapiens
ENSPSIG00000013393	PRPF8	100	97.733	ENSAPOG00000010079	prpf8	100	97.733	Acanthochromis_polyacanthus
ENSPSIG00000013393	PRPF8	100	99.486	ENSAMEG00000007940	PRPF8	100	99.486	Ailuropoda_melanoleuca
ENSPSIG00000013393	PRPF8	100	95.549	ENSACIG00000018280	prpf8	100	95.839	Amphilophus_citrinellus
ENSPSIG00000013393	PRPF8	100	97.733	ENSAOCG00000010725	prpf8	100	97.733	Amphiprion_ocellaris
ENSPSIG00000013393	PRPF8	100	97.733	ENSAPEG00000014397	prpf8	100	97.733	Amphiprion_percula
ENSPSIG00000013393	PRPF8	100	97.134	ENSATEG00000010062	prpf8	100	97.134	Anabas_testudineus
ENSPSIG00000013393	PRPF8	96	99.733	ENSAPLG00000010357	PRPF8	100	99.733	Anas_platyrhynchos
ENSPSIG00000013393	PRPF8	83	97.528	ENSACAG00000014784	PRPF8	99	97.528	Anolis_carolinensis
ENSPSIG00000013393	PRPF8	100	99.486	ENSANAG00000032629	PRPF8	100	99.486	Aotus_nancymaae
ENSPSIG00000013393	PRPF8	100	97.319	ENSACLG00000020858	prpf8	100	97.319	Astatotilapia_calliptera
ENSPSIG00000013393	PRPF8	100	97.773	ENSAMXG00000020291	prpf8	100	97.773	Astyanax_mexicanus
ENSPSIG00000013393	PRPF8	100	99.486	ENSBTAG00000011488	PRPF8	100	99.486	Bos_taurus
ENSPSIG00000013393	PRPF8	99	86.407	WBGene00004187	prp-8	99	86.492	Caenorhabditis_elegans
ENSPSIG00000013393	PRPF8	100	99.486	ENSCJAG00000001911	PRPF8	100	99.486	Callithrix_jacchus
ENSPSIG00000013393	PRPF8	100	99.486	ENSCAFG00000019221	PRPF8	100	99.486	Canis_familiaris
ENSPSIG00000013393	PRPF8	96	99.643	ENSCAFG00020009943	PRPF8	100	99.643	Canis_lupus_dingo
ENSPSIG00000013393	PRPF8	100	99.486	ENSCHIG00000017499	PRPF8	100	99.486	Capra_hircus
ENSPSIG00000013393	PRPF8	100	99.486	ENSTSYG00000014120	PRPF8	100	99.486	Carlito_syrichta
ENSPSIG00000013393	PRPF8	96	97.416	ENSCAPG00000009459	PRPF8	99	97.416	Cavia_aperea
ENSPSIG00000013393	PRPF8	100	99.486	ENSCPOG00000010379	PRPF8	100	99.486	Cavia_porcellus
ENSPSIG00000013393	PRPF8	100	99.486	ENSCCAG00000031983	-	100	99.486	Cebus_capucinus
ENSPSIG00000013393	PRPF8	100	99.486	ENSCATG00000038595	PRPF8	100	99.486	Cercocebus_atys
ENSPSIG00000013393	PRPF8	100	99.486	ENSCLAG00000004388	PRPF8	100	99.486	Chinchilla_lanigera
ENSPSIG00000013393	PRPF8	100	99.486	ENSCSAG00000013929	PRPF8	100	99.486	Chlorocebus_sabaeus
ENSPSIG00000013393	PRPF8	81	98.163	ENSCHOG00000008590	PRPF8	88	98.163	Choloepus_hoffmanni
ENSPSIG00000013393	PRPF8	100	99.957	ENSCPBG00000020409	PRPF8	100	99.957	Chrysemys_picta_bellii
ENSPSIG00000013393	PRPF8	99	92.874	ENSCSAVG00000007825	-	100	91.280	Ciona_savignyi
ENSPSIG00000013393	PRPF8	100	99.486	ENSCANG00000043088	PRPF8	100	99.486	Colobus_angolensis_palliatus
ENSPSIG00000013393	PRPF8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPSIG00000013393	PRPF8	100	97.649	ENSCSEG00000007905	prpf8	100	97.649	Cynoglossus_semilaevis
ENSPSIG00000013393	PRPF8	100	97.609	ENSDARG00000026180	prpf8	100	97.609	Danio_rerio
ENSPSIG00000013393	PRPF8	93	99.494	ENSDNOG00000018471	PRPF8	99	99.494	Dasypus_novemcinctus
ENSPSIG00000013393	PRPF8	84	98.722	ENSDORG00000006185	Prpf8	96	98.722	Dipodomys_ordii
ENSPSIG00000013393	PRPF8	99	91.495	FBgn0033688	Prp8	97	91.495	Drosophila_melanogaster
ENSPSIG00000013393	PRPF8	100	94.047	ENSETEG00000017592	PRPF8	100	94.047	Echinops_telfairi
ENSPSIG00000013393	PRPF8	99	93.677	ENSEBUG00000006548	prpf8	99	93.677	Eptatretus_burgeri
ENSPSIG00000013393	PRPF8	100	99.486	ENSEASG00005009514	PRPF8	100	99.486	Equus_asinus_asinus
ENSPSIG00000013393	PRPF8	97	99.648	ENSECAG00000021318	PRPF8	100	99.648	Equus_caballus
ENSPSIG00000013393	PRPF8	67	99.259	ENSEEUG00000012120	-	67	99.259	Erinaceus_europaeus
ENSPSIG00000013393	PRPF8	98	96.460	ENSELUG00000007120	prpf8	99	96.460	Esox_lucius
ENSPSIG00000013393	PRPF8	100	99.486	ENSFCAG00000006297	PRPF8	100	99.486	Felis_catus
ENSPSIG00000013393	PRPF8	100	99.786	ENSFALG00000006628	PRPF8	100	99.786	Ficedula_albicollis
ENSPSIG00000013393	PRPF8	100	99.486	ENSFDAG00000004711	PRPF8	100	99.486	Fukomys_damarensis
ENSPSIG00000013393	PRPF8	100	97.395	ENSFHEG00000021084	prpf8	100	97.395	Fundulus_heteroclitus
ENSPSIG00000013393	PRPF8	100	95.389	ENSGMOG00000002028	prpf8	99	95.389	Gadus_morhua
ENSPSIG00000013393	PRPF8	100	99.743	ENSGALG00000002943	PRPF8	100	99.743	Gallus_gallus
ENSPSIG00000013393	PRPF8	99	97.643	ENSGAFG00000010337	prpf8	99	97.643	Gambusia_affinis
ENSPSIG00000013393	PRPF8	100	97.602	ENSGACG00000008504	prpf8	100	97.602	Gasterosteus_aculeatus
ENSPSIG00000013393	PRPF8	100	99.872	ENSGAGG00000008350	PRPF8	100	99.872	Gopherus_agassizii
ENSPSIG00000013393	PRPF8	100	99.486	ENSGGOG00000005516	PRPF8	100	99.486	Gorilla_gorilla
ENSPSIG00000013393	PRPF8	100	97.730	ENSHBUG00000016192	prpf8	100	97.730	Haplochromis_burtoni
ENSPSIG00000013393	PRPF8	100	99.486	ENSHGLG00000012029	PRPF8	100	99.486	Heterocephalus_glaber_female
ENSPSIG00000013393	PRPF8	100	99.486	ENSHGLG00100016494	PRPF8	100	99.486	Heterocephalus_glaber_male
ENSPSIG00000013393	PRPF8	100	97.563	ENSHCOG00000016414	prpf8	100	97.563	Hippocampus_comes
ENSPSIG00000013393	PRPF8	100	97.605	ENSIPUG00000023230	prpf8	100	97.605	Ictalurus_punctatus
ENSPSIG00000013393	PRPF8	100	99.486	ENSSTOG00000005128	PRPF8	100	99.486	Ictidomys_tridecemlineatus
ENSPSIG00000013393	PRPF8	100	97.302	ENSJJAG00000021159	Prpf8	100	97.302	Jaculus_jaculus
ENSPSIG00000013393	PRPF8	99	97.893	ENSKMAG00000016118	prpf8	99	97.893	Kryptolebias_marmoratus
ENSPSIG00000013393	PRPF8	100	97.476	ENSLBEG00000026903	prpf8	100	97.476	Labrus_bergylta
ENSPSIG00000013393	PRPF8	95	96.027	ENSLACG00000010479	PRPF8	99	98.551	Latimeria_chalumnae
ENSPSIG00000013393	PRPF8	99	97.860	ENSLOCG00000005409	prpf8	99	97.860	Lepisosteus_oculatus
ENSPSIG00000013393	PRPF8	100	99.486	ENSLAFG00000015445	PRPF8	100	99.486	Loxodonta_africana
ENSPSIG00000013393	PRPF8	100	99.486	ENSMFAG00000039995	PRPF8	100	99.486	Macaca_fascicularis
ENSPSIG00000013393	PRPF8	100	99.486	ENSMMUG00000004820	PRPF8	100	99.486	Macaca_mulatta
ENSPSIG00000013393	PRPF8	100	99.486	ENSMNEG00000035713	PRPF8	100	99.486	Macaca_nemestrina
ENSPSIG00000013393	PRPF8	100	99.486	ENSMLEG00000037937	PRPF8	100	99.486	Mandrillus_leucophaeus
ENSPSIG00000013393	PRPF8	100	97.733	ENSMAMG00000008919	prpf8	100	97.733	Mastacembelus_armatus
ENSPSIG00000013393	PRPF8	100	97.319	ENSMZEG00005015073	prpf8	100	97.319	Maylandia_zebra
ENSPSIG00000013393	PRPF8	100	99.743	ENSMGAG00000004769	PRPF8	100	99.743	Meleagris_gallopavo
ENSPSIG00000013393	PRPF8	100	99.443	ENSMICG00000010320	PRPF8	100	99.443	Microcebus_murinus
ENSPSIG00000013393	PRPF8	100	99.443	ENSMOCG00000016838	Prpf8	100	99.443	Microtus_ochrogaster
ENSPSIG00000013393	PRPF8	100	97.220	ENSMMOG00000011887	prpf8	100	97.220	Mola_mola
ENSPSIG00000013393	PRPF8	100	99.486	ENSMODG00000010480	PRPF8	100	99.486	Monodelphis_domestica
ENSPSIG00000013393	PRPF8	97	97.621	ENSMALG00000003558	prpf8	100	97.621	Monopterus_albus
ENSPSIG00000013393	PRPF8	100	99.400	MGP_CAROLIEiJ_G0016740	Prpf8	100	99.400	Mus_caroli
ENSPSIG00000013393	PRPF8	100	99.400	ENSMUSG00000020850	Prpf8	100	99.400	Mus_musculus
ENSPSIG00000013393	PRPF8	100	99.358	MGP_PahariEiJ_G0017877	Prpf8	100	99.358	Mus_pahari
ENSPSIG00000013393	PRPF8	100	99.400	MGP_SPRETEiJ_G0017583	Prpf8	100	99.400	Mus_spretus
ENSPSIG00000013393	PRPF8	100	99.486	ENSMPUG00000013227	PRPF8	100	99.486	Mustela_putorius_furo
ENSPSIG00000013393	PRPF8	100	99.273	ENSMLUG00000002666	PRPF8	100	99.273	Myotis_lucifugus
ENSPSIG00000013393	PRPF8	100	97.687	ENSNGAG00000005305	Prpf8	100	97.687	Nannospalax_galili
ENSPSIG00000013393	PRPF8	100	97.362	ENSNBRG00000013127	prpf8	100	97.362	Neolamprologus_brichardi
ENSPSIG00000013393	PRPF8	97	97.383	ENSNLEG00000000897	PRPF8	98	97.383	Nomascus_leucogenys
ENSPSIG00000013393	PRPF8	99	97.827	ENSMEUG00000015999	PRPF8	100	97.827	Notamacropus_eugenii
ENSPSIG00000013393	PRPF8	100	97.944	ENSOPRG00000003102	PRPF8	100	97.944	Ochotona_princeps
ENSPSIG00000013393	PRPF8	100	99.486	ENSODEG00000008468	PRPF8	100	99.486	Octodon_degus
ENSPSIG00000013393	PRPF8	100	97.404	ENSONIG00000008153	prpf8	100	97.404	Oreochromis_niloticus
ENSPSIG00000013393	PRPF8	82	99.813	ENSOANG00000004250	PRPF8	97	99.813	Ornithorhynchus_anatinus
ENSPSIG00000013393	PRPF8	100	99.486	ENSOCUG00000000081	PRPF8	100	99.486	Oryctolagus_cuniculus
ENSPSIG00000013393	PRPF8	100	96.941	ENSORLG00000008036	prpf8	100	96.941	Oryzias_latipes
ENSPSIG00000013393	PRPF8	100	96.900	ENSORLG00020021070	prpf8	100	96.900	Oryzias_latipes_hni
ENSPSIG00000013393	PRPF8	100	96.941	ENSORLG00015002340	prpf8	100	96.941	Oryzias_latipes_hsok
ENSPSIG00000013393	PRPF8	99	96.541	ENSOMEG00000016866	prpf8	100	95.455	Oryzias_melastigma
ENSPSIG00000013393	PRPF8	100	99.358	ENSOARG00000013312	PRPF8	100	99.358	Ovis_aries
ENSPSIG00000013393	PRPF8	100	99.486	ENSPPAG00000042753	PRPF8	100	99.486	Pan_paniscus
ENSPSIG00000013393	PRPF8	100	99.486	ENSPPRG00000008746	PRPF8	100	99.486	Panthera_pardus
ENSPSIG00000013393	PRPF8	100	99.400	ENSPTIG00000019200	PRPF8	100	99.400	Panthera_tigris_altaica
ENSPSIG00000013393	PRPF8	100	99.486	ENSPTRG00000039576	PRPF8	100	99.486	Pan_troglodytes
ENSPSIG00000013393	PRPF8	99	99.652	ENSPANG00000024607	PRPF8	98	99.652	Papio_anubis
ENSPSIG00000013393	PRPF8	100	97.529	ENSPKIG00000011201	prpf8	100	97.529	Paramormyrops_kingsleyae
ENSPSIG00000013393	PRPF8	100	99.443	ENSPEMG00000021699	Prpf8	100	99.443	Peromyscus_maniculatus_bairdii
ENSPSIG00000013393	PRPF8	96	93.764	ENSPMAG00000005438	prpf8	100	93.808	Petromyzon_marinus
ENSPSIG00000013393	PRPF8	100	99.486	ENSPCIG00000022603	PRPF8	100	99.643	Phascolarctos_cinereus
ENSPSIG00000013393	PRPF8	100	96.904	ENSPFOG00000007005	prpf8	100	96.904	Poecilia_formosa
ENSPSIG00000013393	PRPF8	100	96.360	ENSPLAG00000020777	prpf8	100	96.360	Poecilia_latipinna
ENSPSIG00000013393	PRPF8	100	96.904	ENSPMEG00000004051	prpf8	100	96.904	Poecilia_mexicana
ENSPSIG00000013393	PRPF8	100	97.773	ENSPREG00000021902	prpf8	100	97.773	Poecilia_reticulata
ENSPSIG00000013393	PRPF8	100	99.486	ENSPPYG00000007777	PRPF8	100	99.486	Pongo_abelii
ENSPSIG00000013393	PRPF8	90	99.010	ENSPCAG00000008938	PRPF8	90	99.010	Procavia_capensis
ENSPSIG00000013393	PRPF8	100	99.443	ENSPCOG00000015182	PRPF8	100	99.443	Propithecus_coquereli
ENSPSIG00000013393	PRPF8	93	99.335	ENSPVAG00000002134	PRPF8	93	99.335	Pteropus_vampyrus
ENSPSIG00000013393	PRPF8	100	97.730	ENSPNYG00000016356	prpf8	100	97.730	Pundamilia_nyererei
ENSPSIG00000013393	PRPF8	100	97.690	ENSPNAG00000009247	prpf8	100	97.690	Pygocentrus_nattereri
ENSPSIG00000013393	PRPF8	100	99.400	ENSRNOG00000003495	Prpf8	100	99.400	Rattus_norvegicus
ENSPSIG00000013393	PRPF8	100	99.486	ENSRBIG00000031219	PRPF8	100	99.486	Rhinopithecus_bieti
ENSPSIG00000013393	PRPF8	100	99.486	ENSRROG00000038014	PRPF8	100	99.486	Rhinopithecus_roxellana
ENSPSIG00000013393	PRPF8	99	62.430	YHR165C	PRP8	95	62.473	Saccharomyces_cerevisiae
ENSPSIG00000013393	PRPF8	100	99.486	ENSSBOG00000029717	PRPF8	100	99.486	Saimiri_boliviensis_boliviensis
ENSPSIG00000013393	PRPF8	100	99.443	ENSSHAG00000006167	PRPF8	100	99.443	Sarcophilus_harrisii
ENSPSIG00000013393	PRPF8	100	97.523	ENSSFOG00015013905	prpf8	100	97.523	Scleropages_formosus
ENSPSIG00000013393	PRPF8	100	97.519	ENSSMAG00000017736	prpf8	100	97.519	Scophthalmus_maximus
ENSPSIG00000013393	PRPF8	100	97.733	ENSSDUG00000003029	prpf8	100	97.733	Seriola_dumerili
ENSPSIG00000013393	PRPF8	68	98.811	ENSSLDG00000017096	prpf8	100	98.811	Seriola_lalandi_dorsalis
ENSPSIG00000013393	PRPF8	87	98.336	ENSSARG00000002892	PRPF8	87	98.336	Sorex_araneus
ENSPSIG00000013393	PRPF8	100	99.400	ENSSPUG00000007463	PRPF8	100	99.400	Sphenodon_punctatus
ENSPSIG00000013393	PRPF8	100	97.134	ENSSPAG00000015639	prpf8	100	97.134	Stegastes_partitus
ENSPSIG00000013393	PRPF8	100	99.486	ENSSSCG00000017817	PRPF8	100	99.486	Sus_scrofa
ENSPSIG00000013393	PRPF8	100	99.786	ENSTGUG00000005648	-	100	99.786	Taeniopygia_guttata
ENSPSIG00000013393	PRPF8	52	99.651	ENSTGUG00000015597	-	95	99.651	Taeniopygia_guttata
ENSPSIG00000013393	PRPF8	100	97.605	ENSTRUG00000015906	prpf8	100	97.605	Takifugu_rubripes
ENSPSIG00000013393	PRPF8	95	98.805	ENSTNIG00000003460	prpf8	99	98.805	Tetraodon_nigroviridis
ENSPSIG00000013393	PRPF8	93	99.660	ENSTBEG00000006431	PRPF8	93	99.660	Tupaia_belangeri
ENSPSIG00000013393	PRPF8	100	98.887	ENSTTRG00000006869	PRPF8	100	98.887	Tursiops_truncatus
ENSPSIG00000013393	PRPF8	54	99.126	ENSUAMG00000015644	-	96	99.126	Ursus_americanus
ENSPSIG00000013393	PRPF8	100	99.229	ENSUMAG00000009385	PRPF8	100	99.229	Ursus_maritimus
ENSPSIG00000013393	PRPF8	71	99.310	ENSVPAG00000006063	-	71	99.310	Vicugna_pacos
ENSPSIG00000013393	PRPF8	100	99.486	ENSVVUG00000021695	PRPF8	99	99.486	Vulpes_vulpes
ENSPSIG00000013393	PRPF8	100	98.630	ENSXETG00000022259	prpf8	100	98.630	Xenopus_tropicalis
ENSPSIG00000013393	PRPF8	100	97.395	ENSXCOG00000012775	prpf8	100	97.395	Xiphophorus_couchianus
ENSPSIG00000013393	PRPF8	100	97.438	ENSXMAG00000008505	prpf8	100	97.438	Xiphophorus_maculatus