EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000013433 (Gene tree)
Gene ID: 102447397
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 45900 bases
Position: chrJH206634.1:256274-302173
Accession: 102447397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015246	DUF1604	PF07713.13	6.8e-36	1	1
ENSPSIP00000015232	DUF1604	PF07713.13	6.8e-36	1	1
ENSPSIP00000015246	G-patch	PF01585.23	2.8e-06	1	1
ENSPSIP00000015232	G-patch	PF01585.23	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015303	GPATCH1-201	4571	XM_006114930	ENSPSIP00000015232	934 (aa)	XP_006114992	K7G4M1
ENSPSIT00000015317	GPATCH1-202	2911	-	ENSPSIP00000015246	929 (aa)	-	K7G4N5

Gene Model

Click here to download ENSPSIG00000013433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013433	GPATCH1	100	62.394	ENSG00000076650	GPATCH1	78	84.000	Homo_sapiens
ENSPSIG00000013433	GPATCH1	100	62.566	ENSAMEG00000015575	GPATCH1	100	62.420	Ailuropoda_melanoleuca
ENSPSIG00000013433	GPATCH1	81	69.613	ENSAOCG00000006668	gpatch1	75	69.613	Amphiprion_ocellaris
ENSPSIG00000013433	GPATCH1	81	54.113	ENSAPEG00000000026	gpatch1	80	55.208	Amphiprion_percula
ENSPSIG00000013433	GPATCH1	81	52.645	ENSATEG00000014494	gpatch1	90	51.653	Anabas_testudineus
ENSPSIG00000013433	GPATCH1	90	68.268	ENSAPLG00000007584	GPATCH1	96	69.204	Anas_platyrhynchos
ENSPSIG00000013433	GPATCH1	100	62.712	ENSANAG00000027002	GPATCH1	100	61.335	Aotus_nancymaae
ENSPSIG00000013433	GPATCH1	81	53.699	ENSACLG00000024740	gpatch1	79	54.373	Astatotilapia_calliptera
ENSPSIG00000013433	GPATCH1	89	53.007	ENSAMXG00000020177	gpatch1	96	53.007	Astyanax_mexicanus
ENSPSIG00000013433	GPATCH1	91	64.327	ENSBTAG00000000721	GPATCH1	100	60.976	Bos_taurus
ENSPSIG00000013433	GPATCH1	68	30.734	WBGene00011109	R07E5.1	68	30.076	Caenorhabditis_elegans
ENSPSIG00000013433	GPATCH1	100	62.500	ENSCJAG00000000684	GPATCH1	100	61.123	Callithrix_jacchus
ENSPSIG00000013433	GPATCH1	100	63.175	ENSCAFG00000007457	GPATCH1	84	63.030	Canis_familiaris
ENSPSIG00000013433	GPATCH1	94	64.673	ENSCAFG00020019731	GPATCH1	91	65.421	Canis_lupus_dingo
ENSPSIG00000013433	GPATCH1	91	65.497	ENSCHIG00000019626	GPATCH1	100	61.849	Capra_hircus
ENSPSIG00000013433	GPATCH1	97	58.033	ENSCAPG00000008827	GPATCH1	100	58.198	Cavia_aperea
ENSPSIG00000013433	GPATCH1	99	59.873	ENSCPOG00000024477	GPATCH1	99	59.599	Cavia_porcellus
ENSPSIG00000013433	GPATCH1	100	62.182	ENSCCAG00000024676	GPATCH1	100	60.805	Cebus_capucinus
ENSPSIG00000013433	GPATCH1	100	62.142	ENSCATG00000043637	GPATCH1	100	61.725	Cercocebus_atys
ENSPSIG00000013433	GPATCH1	89	62.782	ENSCLAG00000003395	-	92	62.819	Chinchilla_lanigera
ENSPSIG00000013433	GPATCH1	100	60.399	ENSCSAG00000004743	GPATCH1	100	60.294	Chlorocebus_sabaeus
ENSPSIG00000013433	GPATCH1	82	57.545	ENSCHOG00000012865	GPATCH1	89	57.471	Choloepus_hoffmanni
ENSPSIG00000013433	GPATCH1	83	86.118	ENSCPBG00000000666	GPATCH1	98	85.714	Chrysemys_picta_bellii
ENSPSIG00000013433	GPATCH1	68	36.991	ENSCING00000012518	-	84	35.573	Ciona_intestinalis
ENSPSIG00000013433	GPATCH1	92	62.306	ENSCANG00000012540	GPATCH1	100	62.168	Colobus_angolensis_palliatus
ENSPSIG00000013433	GPATCH1	97	62.039	ENSCGRG00001016736	Gpatch1	100	60.196	Cricetulus_griseus_chok1gshd
ENSPSIG00000013433	GPATCH1	78	56.540	ENSCGRG00000005069	Gpatch1	78	56.812	Cricetulus_griseus_crigri
ENSPSIG00000013433	GPATCH1	89	40.898	ENSCSEG00000019456	-	76	70.408	Cynoglossus_semilaevis
ENSPSIG00000013433	GPATCH1	90	51.987	ENSDARG00000033418	gpatch1	92	52.179	Danio_rerio
ENSPSIG00000013433	GPATCH1	91	64.576	ENSDNOG00000005291	GPATCH1	95	64.195	Dasypus_novemcinctus
ENSPSIG00000013433	GPATCH1	94	59.800	ENSDORG00000012546	Gpatch1	95	60.162	Dipodomys_ordii
ENSPSIG00000013433	GPATCH1	90	31.607	FBgn0036386	CG8833	66	34.593	Drosophila_melanogaster
ENSPSIG00000013433	GPATCH1	99	60.171	ENSETEG00000003626	GPATCH1	70	68.971	Echinops_telfairi
ENSPSIG00000013433	GPATCH1	94	35.132	ENSEBUG00000011286	gpatch1	83	36.637	Eptatretus_burgeri
ENSPSIG00000013433	GPATCH1	90	65.207	ENSEASG00005021162	GPATCH1	93	64.061	Equus_asinus_asinus
ENSPSIG00000013433	GPATCH1	91	64.802	ENSECAG00000022743	GPATCH1	88	64.795	Equus_caballus
ENSPSIG00000013433	GPATCH1	65	64.677	ENSEEUG00000012925	GPATCH1	66	64.677	Erinaceus_europaeus
ENSPSIG00000013433	GPATCH1	86	56.923	ENSELUG00000018195	gpatch1	91	49.833	Esox_lucius
ENSPSIG00000013433	GPATCH1	100	64.384	ENSFCAG00000014917	GPATCH1	100	61.970	Felis_catus
ENSPSIG00000013433	GPATCH1	99	69.035	ENSFALG00000007821	GPATCH1	91	69.722	Ficedula_albicollis
ENSPSIG00000013433	GPATCH1	88	62.726	ENSFDAG00000003871	GPATCH1	92	61.814	Fukomys_damarensis
ENSPSIG00000013433	GPATCH1	81	47.347	ENSGMOG00000003830	gpatch1	95	44.498	Gadus_morhua
ENSPSIG00000013433	GPATCH1	92	70.690	ENSGALG00000004839	GPATCH1	94	70.960	Gallus_gallus
ENSPSIG00000013433	GPATCH1	81	53.003	ENSGACG00000017544	gpatch1	84	52.652	Gasterosteus_aculeatus
ENSPSIG00000013433	GPATCH1	99	85.405	ENSGAGG00000010067	GPATCH1	99	85.081	Gopherus_agassizii
ENSPSIG00000013433	GPATCH1	97	62.118	ENSGGOG00000010862	GPATCH1	100	61.381	Gorilla_gorilla
ENSPSIG00000013433	GPATCH1	81	54.161	ENSHBUG00000023462	gpatch1	90	52.440	Haplochromis_burtoni
ENSPSIG00000013433	GPATCH1	99	63.474	ENSHGLG00000009334	GPATCH1	99	63.041	Heterocephalus_glaber_female
ENSPSIG00000013433	GPATCH1	99	63.474	ENSHGLG00100018074	GPATCH1	99	63.041	Heterocephalus_glaber_male
ENSPSIG00000013433	GPATCH1	99	51.165	ENSIPUG00000014977	gpatch1	90	52.548	Ictalurus_punctatus
ENSPSIG00000013433	GPATCH1	100	62.788	ENSSTOG00000003720	GPATCH1	100	63.224	Ictidomys_tridecemlineatus
ENSPSIG00000013433	GPATCH1	91	63.753	ENSJJAG00000023765	Gpatch1	100	61.294	Jaculus_jaculus
ENSPSIG00000013433	GPATCH1	81	53.384	ENSKMAG00000017950	gpatch1	82	53.384	Kryptolebias_marmoratus
ENSPSIG00000013433	GPATCH1	81	51.801	ENSLBEG00000026527	gpatch1	79	52.381	Labrus_bergylta
ENSPSIG00000013433	GPATCH1	87	62.652	ENSLACG00000008130	GPATCH1	89	62.728	Latimeria_chalumnae
ENSPSIG00000013433	GPATCH1	81	57.717	ENSLOCG00000001800	gpatch1	89	55.948	Lepisosteus_oculatus
ENSPSIG00000013433	GPATCH1	91	65.461	ENSLAFG00000013589	GPATCH1	100	62.739	Loxodonta_africana
ENSPSIG00000013433	GPATCH1	90	64.561	ENSMFAG00000034418	GPATCH1	78	83.000	Macaca_fascicularis
ENSPSIG00000013433	GPATCH1	100	61.805	ENSMMUG00000011790	GPATCH1	78	84.000	Macaca_mulatta
ENSPSIG00000013433	GPATCH1	100	61.765	ENSMNEG00000045084	GPATCH1	100	61.660	Macaca_nemestrina
ENSPSIG00000013433	GPATCH1	100	55.591	ENSMLEG00000043840	GPATCH1	100	53.102	Mandrillus_leucophaeus
ENSPSIG00000013433	GPATCH1	81	53.699	ENSMZEG00005001926	gpatch1	80	54.373	Maylandia_zebra
ENSPSIG00000013433	GPATCH1	90	72.857	ENSMGAG00000005775	GPATCH1	90	72.944	Meleagris_gallopavo
ENSPSIG00000013433	GPATCH1	89	57.583	ENSMICG00000004829	GPATCH1	92	57.329	Microcebus_murinus
ENSPSIG00000013433	GPATCH1	91	63.182	ENSMOCG00000000174	Gpatch1	92	63.520	Microtus_ochrogaster
ENSPSIG00000013433	GPATCH1	80	50.064	ENSMMOG00000002140	gpatch1	87	50.573	Mola_mola
ENSPSIG00000013433	GPATCH1	99	64.233	ENSMODG00000012226	GPATCH1	99	64.021	Monodelphis_domestica
ENSPSIG00000013433	GPATCH1	81	53.631	ENSMALG00000014386	gpatch1	82	53.503	Monopterus_albus
ENSPSIG00000013433	GPATCH1	100	64.089	ENSMUSG00000063808	Gpatch1	100	82.653	Mus_musculus
ENSPSIG00000013433	GPATCH1	100	62.803	MGP_PahariEiJ_G0012816	Gpatch1	100	82.653	Mus_pahari
ENSPSIG00000013433	GPATCH1	100	63.983	MGP_SPRETEiJ_G0030681	Gpatch1	100	82.653	Mus_spretus
ENSPSIG00000013433	GPATCH1	100	65.190	ENSMPUG00000007658	GPATCH1	100	64.472	Mustela_putorius_furo
ENSPSIG00000013433	GPATCH1	100	62.606	ENSMLUG00000012161	GPATCH1	100	62.142	Myotis_lucifugus
ENSPSIG00000013433	GPATCH1	100	60.504	ENSNGAG00000012455	Gpatch1	100	61.400	Nannospalax_galili
ENSPSIG00000013433	GPATCH1	100	61.814	ENSNLEG00000007659	GPATCH1	78	84.000	Nomascus_leucogenys
ENSPSIG00000013433	GPATCH1	78	60.055	ENSMEUG00000015174	GPATCH1	78	59.863	Notamacropus_eugenii
ENSPSIG00000013433	GPATCH1	99	61.824	ENSODEG00000007103	GPATCH1	91	62.427	Octodon_degus
ENSPSIG00000013433	GPATCH1	81	54.522	ENSONIG00000003302	gpatch1	91	53.918	Oreochromis_niloticus
ENSPSIG00000013433	GPATCH1	99	68.008	ENSOANG00000012732	GPATCH1	99	67.412	Ornithorhynchus_anatinus
ENSPSIG00000013433	GPATCH1	99	61.880	ENSOCUG00000015905	GPATCH1	99	61.257	Oryctolagus_cuniculus
ENSPSIG00000013433	GPATCH1	81	51.488	ENSORLG00000018706	gpatch1	88	49.942	Oryzias_latipes
ENSPSIG00000013433	GPATCH1	89	49.129	ENSOMEG00000022688	gpatch1	90	49.942	Oryzias_melastigma
ENSPSIG00000013433	GPATCH1	81	67.277	ENSOGAG00000004016	GPATCH1	96	67.366	Otolemur_garnettii
ENSPSIG00000013433	GPATCH1	90	65.407	ENSOARG00000004365	GPATCH1	99	61.522	Ovis_aries
ENSPSIG00000013433	GPATCH1	100	62.288	ENSPPAG00000020990	GPATCH1	100	61.870	Pan_paniscus
ENSPSIG00000013433	GPATCH1	100	61.970	ENSPPRG00000017245	GPATCH1	100	61.547	Panthera_pardus
ENSPSIG00000013433	GPATCH1	100	62.818	ENSPTIG00000019649	GPATCH1	100	62.500	Panthera_tigris_altaica
ENSPSIG00000013433	GPATCH1	100	62.288	ENSPTRG00000010803	GPATCH1	78	84.000	Pan_troglodytes
ENSPSIG00000013433	GPATCH1	91	64.037	ENSPANG00000012374	GPATCH1	78	83.000	Papio_anubis
ENSPSIG00000013433	GPATCH1	81	55.841	ENSPKIG00000020745	gpatch1	77	55.784	Paramormyrops_kingsleyae
ENSPSIG00000013433	GPATCH1	100	61.970	ENSPEMG00000000636	Gpatch1	91	64.019	Peromyscus_maniculatus_bairdii
ENSPSIG00000013433	GPATCH1	90	65.100	ENSPCIG00000021003	GPATCH1	96	64.685	Phascolarctos_cinereus
ENSPSIG00000013433	GPATCH1	70	48.865	ENSPREG00000008264	gpatch1	79	48.554	Poecilia_reticulata
ENSPSIG00000013433	GPATCH1	100	61.950	ENSPPYG00000009824	GPATCH1	100	60.021	Pongo_abelii
ENSPSIG00000013433	GPATCH1	82	60.632	ENSPCAG00000005931	GPATCH1	92	60.724	Procavia_capensis
ENSPSIG00000013433	GPATCH1	92	62.297	ENSPCOG00000009674	GPATCH1	96	62.073	Propithecus_coquereli
ENSPSIG00000013433	GPATCH1	78	65.536	ENSPVAG00000017767	GPATCH1	78	65.400	Pteropus_vampyrus
ENSPSIG00000013433	GPATCH1	81	53.856	ENSPNYG00000018189	gpatch1	89	54.662	Pundamilia_nyererei
ENSPSIG00000013433	GPATCH1	91	52.863	ENSPNAG00000013187	gpatch1	92	53.940	Pygocentrus_nattereri
ENSPSIG00000013433	GPATCH1	100	64.376	ENSRNOG00000011584	Gpatch1	100	64.588	Rattus_norvegicus
ENSPSIG00000013433	GPATCH1	100	58.051	ENSRBIG00000034723	GPATCH1	91	58.796	Rhinopithecus_bieti
ENSPSIG00000013433	GPATCH1	100	62.076	ENSRROG00000024428	GPATCH1	100	61.864	Rhinopithecus_roxellana
ENSPSIG00000013433	GPATCH1	100	62.606	ENSSBOG00000034650	GPATCH1	100	62.080	Saimiri_boliviensis_boliviensis
ENSPSIG00000013433	GPATCH1	99	65.503	ENSSHAG00000016016	GPATCH1	99	65.079	Sarcophilus_harrisii
ENSPSIG00000013433	GPATCH1	81	56.066	ENSSFOG00015011535	gpatch1	89	54.325	Scleropages_formosus
ENSPSIG00000013433	GPATCH1	97	54.783	ENSSMAG00000002883	gpatch1	95	47.346	Scophthalmus_maximus
ENSPSIG00000013433	GPATCH1	81	52.321	ENSSDUG00000007444	gpatch1	89	50.616	Seriola_dumerili
ENSPSIG00000013433	GPATCH1	81	52.497	ENSSLDG00000002856	gpatch1	89	53.509	Seriola_lalandi_dorsalis
ENSPSIG00000013433	GPATCH1	71	68.750	ENSSARG00000004108	GPATCH1	70	69.692	Sorex_araneus
ENSPSIG00000013433	GPATCH1	91	64.843	ENSSSCG00000002865	GPATCH1	94	64.726	Sus_scrofa
ENSPSIG00000013433	GPATCH1	92	70.684	ENSTGUG00000009401	GPATCH1	91	71.957	Taeniopygia_guttata
ENSPSIG00000013433	GPATCH1	81	52.356	ENSTRUG00000005785	-	89	50.350	Takifugu_rubripes
ENSPSIG00000013433	GPATCH1	81	52.356	ENSTRUG00000025081	gpatch1	89	50.350	Takifugu_rubripes
ENSPSIG00000013433	GPATCH1	81	51.562	ENSTNIG00000002554	gpatch1	96	52.288	Tetraodon_nigroviridis
ENSPSIG00000013433	GPATCH1	60	59.218	ENSTBEG00000007750	-	80	59.218	Tupaia_belangeri
ENSPSIG00000013433	GPATCH1	90	58.216	ENSTTRG00000012221	GPATCH1	99	58.955	Tursiops_truncatus
ENSPSIG00000013433	GPATCH1	91	64.369	ENSUMAG00000014645	GPATCH1	79	82.653	Ursus_maritimus
ENSPSIG00000013433	GPATCH1	79	76.571	ENSVPAG00000010313	GPATCH1	86	76.503	Vicugna_pacos
ENSPSIG00000013433	GPATCH1	94	64.447	ENSVVUG00000016572	GPATCH1	91	65.187	Vulpes_vulpes
ENSPSIG00000013433	GPATCH1	99	50.728	ENSXETG00000018276	gpatch1	94	55.336	Xenopus_tropicalis