EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPSIG00000013505 (Gene tree)
Gene ID
102457456
Gene Symbol
PRDM5
Alias
-
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
146691 bases
Position
chrJH209423.1:1833127-1979817
Accession
102457456
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71112
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71212
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71312
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71412
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71512
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71612
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71712
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71812
ENSPSIP00000015205zf-C2H2PF00096.265.3e-71912
ENSPSIP00000015205zf-C2H2PF00096.265.3e-711012
ENSPSIP00000015205zf-C2H2PF00096.265.3e-711112
ENSPSIP00000015205zf-C2H2PF00096.265.3e-711212
ENSPSIP00000015205zf-metPF12874.74.4e-3015
ENSPSIP00000015205zf-metPF12874.74.4e-3025
ENSPSIP00000015205zf-metPF12874.74.4e-3035
ENSPSIP00000015205zf-metPF12874.74.4e-3045
ENSPSIP00000015205zf-metPF12874.74.4e-3055
ENSPSIP00000015205zf-C2H2_jazPF12171.84.2e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000015276PRDM5-2012092XM_006125581ENSPSIP00000015205633 (aa)XP_006125643K7G4J4
Gene Model
Click here to download ENSPSIG00000013505's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013505's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPSIG00000013505PRDM57339.904ENSPSIG00000016247-6038.956
ENSPSIG00000013505PRDM56831.330ENSPSIG00000011562-9231.330
ENSPSIG00000013505PRDM57441.477ENSPSIG00000008734GFI15041.011
ENSPSIG00000013505PRDM57439.161ENSPSIG00000009603-10039.161
ENSPSIG00000013505PRDM57340.000ENSPSIG00000001739-9940.000
ENSPSIG00000013505PRDM57337.864ENSPSIG00000005128-10037.864
ENSPSIG00000013505PRDM57340.571ENSPSIG00000009270-7240.571
ENSPSIG00000013505PRDM57341.818ENSPSIG00000000672-8541.818
ENSPSIG00000013505PRDM58339.423ENSPSIG00000004502-6139.423
ENSPSIG00000013505PRDM56836.328ENSPSIG00000005672-7336.328
ENSPSIG00000013505PRDM56739.303ENSPSIG00000016033-5539.303
ENSPSIG00000013505PRDM55237.143ENSPSIG00000006768OVOL26337.143
ENSPSIG00000013505PRDM57338.209ENSPSIG00000001026-9238.209
ENSPSIG00000013505PRDM57339.610ENSPSIG00000004614-8339.610
ENSPSIG00000013505PRDM57334.080ENSPSIG00000006586-10034.080
ENSPSIG00000013505PRDM55738.532ENSPSIG00000011896ZIC35437.762
ENSPSIG00000013505PRDM57332.990ENSPSIG00000004303ZNF3199332.990
ENSPSIG00000013505PRDM57144.366ENSPSIG00000006790-9144.366
ENSPSIG00000013505PRDM57336.190ENSPSIG00000004682ZNF6526336.190
ENSPSIG00000013505PRDM57738.785ENSPSIG00000010328-7137.975
ENSPSIG00000013505PRDM59137.255ENSPSIG00000015459-7237.255
ENSPSIG00000013505PRDM57338.214ENSPSIG00000003152-8633.553
ENSPSIG00000013505PRDM59039.103ENSPSIG00000016380-7339.103
ENSPSIG00000013505PRDM57341.040ENSPSIG00000009650-6941.040
ENSPSIG00000013505PRDM57339.088ENSPSIG00000012650-7739.007
ENSPSIG00000013505PRDM57337.725ENSPSIG00000015465-7637.725
ENSPSIG00000013505PRDM59940.816ENSPSIG00000012066PRDM45440.789
ENSPSIG00000013505PRDM57236.824ENSPSIG00000000075-7136.824
ENSPSIG00000013505PRDM55741.606ENSPSIG00000016395SNAI25241.606
ENSPSIG00000013505PRDM57342.982ENSPSIG00000010405-9942.982
ENSPSIG00000013505PRDM57237.975ENSPSIG00000000333-7636.782
ENSPSIG00000013505PRDM57439.506ENSPSIG00000012112GFI1B5739.506
ENSPSIG00000013505PRDM57936.691ENSPSIG00000014208-5636.691
ENSPSIG00000013505PRDM59135.817ENSPSIG00000005603-6835.714
ENSPSIG00000013505PRDM57440.385ENSPSIG00000004647-5140.385
ENSPSIG00000013505PRDM57339.147ENSPSIG00000010248-6538.830
ENSPSIG00000013505PRDM59140.789ENSPSIG00000006739PRDM127140.789
ENSPSIG00000013505PRDM57337.766ENSPSIG00000000522-9537.766
ENSPSIG00000013505PRDM57342.525ENSPSIG00000012865-7042.525
ENSPSIG00000013505PRDM57340.000ENSPSIG00000013021-7440.000
ENSPSIG00000013505PRDM57341.026ENSPSIG00000014455GZF15041.026
ENSPSIG00000013505PRDM57331.034ENSPSIG00000005522ZNF6469931.329
ENSPSIG00000013505PRDM57334.273ENSPSIG00000008588-9934.273
ENSPSIG00000013505PRDM57338.009ENSPSIG00000015216-7738.009
ENSPSIG00000013505PRDM58538.318ENSPSIG00000002538ZNF5218938.318
ENSPSIG00000013505PRDM58331.333ENSPSIG00000000760-9231.333
ENSPSIG00000013505PRDM55641.304ENSPSIG00000003607SNAI15541.007
ENSPSIG00000013505PRDM57339.600ENSPSIG00000009893-6639.600
ENSPSIG00000013505PRDM56132.857ENSPSIG00000011722GTF3A7232.857
ENSPSIG00000013505PRDM57344.444ENSPSIG00000002569-7644.444
ENSPSIG00000013505PRDM55843.396ENSPSIG00000004262SNAI36243.396
ENSPSIG00000013505PRDM56832.487ENSPSIG00000016553-5232.487
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000013505PRDM510084.676ENSG00000138738PRDM510084.360Homo_sapiens
ENSPSIG00000013505PRDM510080.757ENSAPOG00000023220prdm510079.811Acanthochromis_polyacanthus
ENSPSIG00000013505PRDM59178.238ENSAMEG00000003050PRDM510078.584Ailuropoda_melanoleuca
ENSPSIG00000013505PRDM510079.811ENSACIG00000000406prdm510080.284Amphilophus_citrinellus
ENSPSIG00000013505PRDM510081.703ENSAOCG00000014806prdm510081.230Amphiprion_ocellaris
ENSPSIG00000013505PRDM510072.672ENSAPEG00000016846prdm510073.435Amphiprion_percula
ENSPSIG00000013505PRDM510084.385ENSATEG00000013829prdm59984.385Anabas_testudineus
ENSPSIG00000013505PRDM59594.684ENSAPLG00000013828PRDM510094.684Anas_platyrhynchos
ENSPSIG00000013505PRDM510089.889ENSACAG00000012999PRDM510089.889Anolis_carolinensis
ENSPSIG00000013505PRDM510090.190ENSANAG00000027411PRDM510090.190Aotus_nancymaae
ENSPSIG00000013505PRDM510081.861ENSACLG00000017996prdm510082.492Astatotilapia_calliptera
ENSPSIG00000013505PRDM58583.704ENSAMXG00000041864prdm59984.104Astyanax_mexicanus
ENSPSIG00000013505PRDM510084.044ENSBTAG00000012111PRDM510083.728Bos_taurus
ENSPSIG00000013505PRDM510090.190ENSCJAG00000003133PRDM510090.190Callithrix_jacchus
ENSPSIG00000013505PRDM59276.460ENSCAFG00000004179PRDM59976.460Canis_familiaris
ENSPSIG00000013505PRDM510084.202ENSCAFG00020017685PRDM510084.202Canis_lupus_dingo
ENSPSIG00000013505PRDM510083.254ENSCHIG00000018772PRDM510083.254Capra_hircus
ENSPSIG00000013505PRDM59584.307ENSTSYG00000009630PRDM59584.124Carlito_syrichta
ENSPSIG00000013505PRDM59189.333ENSCAPG00000015217PRDM510089.333Cavia_aperea
ENSPSIG00000013505PRDM59589.873ENSCPOG00000012883PRDM510089.873Cavia_porcellus
ENSPSIG00000013505PRDM510090.506ENSCCAG00000023157PRDM510090.506Cebus_capucinus
ENSPSIG00000013505PRDM510090.506ENSCATG00000042510PRDM510090.506Cercocebus_atys
ENSPSIG00000013505PRDM59589.557ENSCLAG00000005392PRDM510089.557Chinchilla_lanigera
ENSPSIG00000013505PRDM510081.201ENSCSAG00000003729PRDM510081.043Chlorocebus_sabaeus
ENSPSIG00000013505PRDM59979.720ENSCHOG00000007801PRDM59179.720Choloepus_hoffmanni
ENSPSIG00000013505PRDM510097.340ENSCPBG00000024735PRDM510097.340Chrysemys_picta_bellii
ENSPSIG00000013505PRDM510090.506ENSCANG00000036807PRDM510090.506Colobus_angolensis_palliatus
ENSPSIG00000013505PRDM510090.667ENSCGRG00001010581Prdm510090.667Cricetulus_griseus_chok1gshd
ENSPSIG00000013505PRDM59572.259ENSCGRG00000010996-9972.259Cricetulus_griseus_crigri
ENSPSIG00000013505PRDM510081.546ENSCSEG00000019979prdm510080.757Cynoglossus_semilaevis
ENSPSIG00000013505PRDM510079.653ENSCVAG00000013692prdm510080.284Cyprinodon_variegatus
ENSPSIG00000013505PRDM510082.047ENSDARG00000006288prdm510081.732Danio_rerio
ENSPSIG00000013505PRDM59183.391ENSDNOG00000002009PRDM510083.218Dasypus_novemcinctus
ENSPSIG00000013505PRDM510088.924ENSDORG00000007739Prdm510088.924Dipodomys_ordii
ENSPSIG00000013505PRDM59180.702ENSETEG00000020268PRDM58880.702Echinops_telfairi
ENSPSIG00000013505PRDM59970.570ENSEBUG00000004301prdm510070.095Eptatretus_burgeri
ENSPSIG00000013505PRDM510090.823ENSEASG00005018365PRDM510090.823Equus_asinus_asinus
ENSPSIG00000013505PRDM59982.450ENSECAG00000011516PRDM59082.450Equus_caballus
ENSPSIG00000013505PRDM510068.827ENSECAG00000024747-10078.505Equus_caballus
ENSPSIG00000013505PRDM59977.547ENSEEUG00000010306PRDM510077.547Erinaceus_europaeus
ENSPSIG00000013505PRDM59982.967ENSELUG00000005894prdm59382.967Esox_lucius
ENSPSIG00000013505PRDM510083.886ENSFCAG00000025656PRDM510083.886Felis_catus
ENSPSIG00000013505PRDM59988.785ENSFALG00000008381PRDM510088.785Ficedula_albicollis
ENSPSIG00000013505PRDM510089.873ENSFDAG00000021361PRDM510089.873Fukomys_damarensis
ENSPSIG00000013505PRDM510081.703ENSFHEG00000013040prdm510082.177Fundulus_heteroclitus
ENSPSIG00000013505PRDM59776.316ENSGMOG00000012038prdm510076.316Gadus_morhua
ENSPSIG00000013505PRDM510094.471ENSGALG00000011963PRDM510094.471Gallus_gallus
ENSPSIG00000013505PRDM59982.936ENSGAFG00000019233prdm510078.076Gambusia_affinis
ENSPSIG00000013505PRDM59995.785ENSGAGG00000020362PRDM59995.785Gopherus_agassizii
ENSPSIG00000013505PRDM510090.506ENSGGOG00000013562PRDM510090.506Gorilla_gorilla
ENSPSIG00000013505PRDM510081.546ENSHBUG00000023375prdm510081.861Haplochromis_burtoni
ENSPSIG00000013505PRDM510076.582ENSHGLG00000003010PRDM510081.646Heterocephalus_glaber_female
ENSPSIG00000013505PRDM510090.190ENSHGLG00100003696PRDM510090.190Heterocephalus_glaber_male
ENSPSIG00000013505PRDM510083.780ENSHCOG00000012131prdm510083.780Hippocampus_comes
ENSPSIG00000013505PRDM510083.780ENSIPUG00000001248prdm59984.094Ictalurus_punctatus
ENSPSIG00000013505PRDM59587.975ENSSTOG00000004741PRDM510088.000Ictidomys_tridecemlineatus
ENSPSIG00000013505PRDM59589.557ENSJJAG00000011464Prdm510089.557Jaculus_jaculus
ENSPSIG00000013505PRDM510082.334ENSKMAG00000013663prdm510082.492Kryptolebias_marmoratus
ENSPSIG00000013505PRDM510084.385ENSLBEG00000022736prdm510084.385Labrus_bergylta
ENSPSIG00000013505PRDM59191.349ENSLACG00000009187PRDM59991.349Latimeria_chalumnae
ENSPSIG00000013505PRDM510087.520ENSLOCG00000009778prdm59987.520Lepisosteus_oculatus
ENSPSIG00000013505PRDM510080.885ENSLAFG00000006532PRDM510084.810Loxodonta_africana
ENSPSIG00000013505PRDM510090.506ENSMFAG00000045845PRDM510090.506Macaca_fascicularis
ENSPSIG00000013505PRDM510090.506ENSMMUG00000003249PRDM510090.506Macaca_mulatta
ENSPSIG00000013505PRDM510090.506ENSMNEG00000019018PRDM510090.506Macaca_nemestrina
ENSPSIG00000013505PRDM59981.270ENSMLEG00000023145PRDM510083.887Mandrillus_leucophaeus
ENSPSIG00000013505PRDM510082.808ENSMAMG00000013419prdm510082.965Mastacembelus_armatus
ENSPSIG00000013505PRDM510081.546ENSMZEG00005020645prdm510081.861Maylandia_zebra
ENSPSIG00000013505PRDM59594.518ENSMGAG00000010710PRDM510094.518Meleagris_gallopavo
ENSPSIG00000013505PRDM510090.667ENSMAUG00000006768Prdm510090.667Mesocricetus_auratus
ENSPSIG00000013505PRDM510089.873ENSMICG00000001459PRDM510089.873Microcebus_murinus
ENSPSIG00000013505PRDM510090.667ENSMOCG00000016267Prdm510090.667Microtus_ochrogaster
ENSPSIG00000013505PRDM510081.417ENSMMOG00000006035prdm510081.417Mola_mola
ENSPSIG00000013505PRDM510086.142ENSMODG00000018942PRDM510086.006Monodelphis_domestica
ENSPSIG00000013505PRDM510078.076ENSMALG00000013934prdm510078.549Monopterus_albus
ENSPSIG00000013505PRDM510090.000MGP_CAROLIEiJ_G0028463Prdm510090.000Mus_caroli
ENSPSIG00000013505PRDM510090.000ENSMUSG00000029913Prdm510090.000Mus_musculus
ENSPSIG00000013505PRDM510090.000MGP_PahariEiJ_G0022203Prdm510090.000Mus_pahari
ENSPSIG00000013505PRDM510090.000MGP_SPRETEiJ_G0029467Prdm510090.000Mus_spretus
ENSPSIG00000013505PRDM510083.412ENSMPUG00000017415PRDM510083.412Mustela_putorius_furo
ENSPSIG00000013505PRDM59175.904ENSMLUG00000006097PRDM510075.904Myotis_lucifugus
ENSPSIG00000013505PRDM510090.190ENSNGAG00000018317Prdm510090.190Nannospalax_galili
ENSPSIG00000013505PRDM510073.095ENSNBRG00000004976prdm510078.459Neolamprologus_brichardi
ENSPSIG00000013505PRDM510090.506ENSNLEG00000009107PRDM510090.506Nomascus_leucogenys
ENSPSIG00000013505PRDM58489.831ENSMEUG00000006576-7189.831Notamacropus_eugenii
ENSPSIG00000013505PRDM59565.496ENSOPRG00000011066-8964.876Ochotona_princeps
ENSPSIG00000013505PRDM59989.873ENSODEG00000009133PRDM510089.873Octodon_degus
ENSPSIG00000013505PRDM510084.069ENSONIG00000003111prdm59985.016Oreochromis_niloticus
ENSPSIG00000013505PRDM59980.492ENSOANG00000015109PRDM59780.492Ornithorhynchus_anatinus
ENSPSIG00000013505PRDM56898.889ENSOANG00000006197-10098.889Ornithorhynchus_anatinus
ENSPSIG00000013505PRDM59376.610ENSOCUG00000013454PRDM510077.797Oryctolagus_cuniculus
ENSPSIG00000013505PRDM510081.073ENSORLG00000016247prdm510081.703Oryzias_latipes
ENSPSIG00000013505PRDM510080.915ENSORLG00020018051prdm510080.757Oryzias_latipes_hni
ENSPSIG00000013505PRDM510081.073ENSORLG00015013760prdm510081.703Oryzias_latipes_hsok
ENSPSIG00000013505PRDM510081.732ENSOMEG00000005143prdm510082.362Oryzias_melastigma
ENSPSIG00000013505PRDM58476.779ENSOGAG00000009996PRDM59875.836Otolemur_garnettii
ENSPSIG00000013505PRDM59582.428ENSOARG00000015473PRDM510081.087Ovis_aries
ENSPSIG00000013505PRDM59981.429ENSPPAG00000043045PRDM510083.559Pan_paniscus
ENSPSIG00000013505PRDM510084.360ENSPPRG00000001020PRDM510084.044Panthera_pardus
ENSPSIG00000013505PRDM59583.223ENSPTIG00000010807PRDM59583.223Panthera_tigris_altaica
ENSPSIG00000013505PRDM510090.506ENSPTRG00000016403PRDM510090.506Pan_troglodytes
ENSPSIG00000013505PRDM510090.506ENSPANG00000023612PRDM510090.506Papio_anubis
ENSPSIG00000013505PRDM510046.745ENSPKIG00000015492prdm510060.630Paramormyrops_kingsleyae
ENSPSIG00000013505PRDM510079.968ENSPMGG00000012622prdm510079.968Periophthalmus_magnuspinnatus
ENSPSIG00000013505PRDM57375.728ENSPMAG00000005248prdm510076.699Petromyzon_marinus
ENSPSIG00000013505PRDM59973.429ENSPFOG00000018630prdm59974.510Poecilia_formosa
ENSPSIG00000013505PRDM510083.596ENSPLAG00000014148prdm510084.227Poecilia_latipinna
ENSPSIG00000013505PRDM510081.861ENSPMEG00000018002prdm510082.492Poecilia_mexicana
ENSPSIG00000013505PRDM510081.861ENSPREG00000018366prdm510082.492Poecilia_reticulata
ENSPSIG00000013505PRDM510084.676ENSPPYG00000015031PRDM510084.360Pongo_abelii
ENSPSIG00000013505PRDM59578.239ENSPCAG00000011671PRDM510078.239Procavia_capensis
ENSPSIG00000013505PRDM510089.873ENSPCOG00000022828PRDM510089.873Propithecus_coquereli
ENSPSIG00000013505PRDM59578.738ENSPVAG00000012309PRDM510078.571Pteropus_vampyrus
ENSPSIG00000013505PRDM510081.703ENSPNYG00000012194prdm510082.334Pundamilia_nyererei
ENSPSIG00000013505PRDM59379.730ENSPNAG00000023191-10080.101Pygocentrus_nattereri
ENSPSIG00000013505PRDM510081.388ENSPNAG00000026181prdm510081.732Pygocentrus_nattereri
ENSPSIG00000013505PRDM59976.481ENSRNOG00000023679Prdm59976.481Rattus_norvegicus
ENSPSIG00000013505PRDM510090.506ENSRBIG00000041307PRDM510090.506Rhinopithecus_bieti
ENSPSIG00000013505PRDM59570.185ENSRROG00000035343PRDM510075.914Rhinopithecus_roxellana
ENSPSIG00000013505PRDM510090.506ENSSBOG00000022100PRDM510090.506Saimiri_boliviensis_boliviensis
ENSPSIG00000013505PRDM59184.631ENSSHAG00000003250PRDM510084.631Sarcophilus_harrisii
ENSPSIG00000013505PRDM510080.599ENSSFOG00015020478prdm510079.968Scleropages_formosus
ENSPSIG00000013505PRDM510084.700ENSSMAG00000018844prdm59984.700Scophthalmus_maximus
ENSPSIG00000013505PRDM510082.334ENSSDUG00000020397prdm510082.650Seriola_dumerili
ENSPSIG00000013505PRDM59983.477ENSSLDG00000013353prdm510082.650Seriola_lalandi_dorsalis
ENSPSIG00000013505PRDM59290.598ENSSARG00000014129-6590.598Sorex_araneus
ENSPSIG00000013505PRDM510098.418ENSSPUG00000009941PRDM510098.418Sphenodon_punctatus
ENSPSIG00000013505PRDM510084.069ENSSPAG00000013866prdm510083.281Stegastes_partitus
ENSPSIG00000013505PRDM510084.202ENSSSCG00000009101PRDM510084.044Sus_scrofa
ENSPSIG00000013505PRDM59593.688ENSTGUG00000001920PRDM510093.355Taeniopygia_guttata
ENSPSIG00000013505PRDM510081.230ENSTRUG00000013850prdm510080.599Takifugu_rubripes
ENSPSIG00000013505PRDM510068.331ENSTNIG00000005901prdm510068.069Tetraodon_nigroviridis
ENSPSIG00000013505PRDM59577.446ENSTBEG00000015386PRDM58677.446Tupaia_belangeri
ENSPSIG00000013505PRDM510083.254ENSTTRG00000010996PRDM510082.938Tursiops_truncatus
ENSPSIG00000013505PRDM59589.744ENSUAMG00000009994PRDM57789.744Ursus_americanus
ENSPSIG00000013505PRDM59590.823ENSUMAG00000003733PRDM59990.823Ursus_maritimus
ENSPSIG00000013505PRDM59773.984ENSVPAG00000007435PRDM510073.984Vicugna_pacos
ENSPSIG00000013505PRDM59383.220ENSVVUG00000013192PRDM510083.220Vulpes_vulpes
ENSPSIG00000013505PRDM510085.150ENSXETG00000002101prdm510084.882Xenopus_tropicalis
ENSPSIG00000013505PRDM510082.177ENSXCOG00000008567prdm510082.177Xiphophorus_couchianus
ENSPSIG00000013505PRDM510082.177ENSXMAG00000013825prdm510082.177Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us