EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000013571 (Gene tree)
Gene ID: 102454411
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 3375 bases
Position: chrJH211449.1:51817-55191
Accession: 102454411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015188	EXOSC1	PF10447.9	1.3e-07	1	1
ENSPSIP00000015193	EXOSC1	PF10447.9	6.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015259	EXOSC1-201	1483	XM_006132770	ENSPSIP00000015188	198 (aa)	-	K7G4H7
ENSPSIT00000015264	EXOSC1-202	372	-	ENSPSIP00000015193	124 (aa)	-	K7G4I2

Gene Model

Click here to download ENSPSIG00000013571's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013571's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013571	EXOSC1	98	80.992	ENSG00000171311	EXOSC1	75	82.192	Homo_sapiens
ENSPSIG00000013571	EXOSC1	98	80.165	ENSAPOG00000007822	exosc1	91	66.316	Acanthochromis_polyacanthus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSAMEG00000000129	EXOSC1	75	81.507	Ailuropoda_melanoleuca
ENSPSIG00000013571	EXOSC1	98	79.339	ENSACIG00000018956	exosc1	87	65.789	Amphilophus_citrinellus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSAOCG00000010699	exosc1	91	66.316	Amphiprion_ocellaris
ENSPSIG00000013571	EXOSC1	98	64.463	ENSAPEG00000012690	exosc1	95	55.789	Amphiprion_percula
ENSPSIG00000013571	EXOSC1	98	80.165	ENSATEG00000018683	exosc1	91	66.316	Anabas_testudineus
ENSPSIG00000013571	EXOSC1	98	81.967	ENSACAG00000002101	EXOSC1	75	83.562	Anolis_carolinensis
ENSPSIG00000013571	EXOSC1	98	81.818	ENSANAG00000034669	EXOSC1	75	82.192	Aotus_nancymaae
ENSPSIG00000013571	EXOSC1	98	80.165	ENSACLG00000021243	exosc1	91	66.316	Astatotilapia_calliptera
ENSPSIG00000013571	EXOSC1	98	80.165	ENSAMXG00000011116	exosc1	91	66.316	Astyanax_mexicanus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSBTAG00000012699	EXOSC1	75	81.507	Bos_taurus
ENSPSIG00000013571	EXOSC1	94	32.203	WBGene00012966	exos-1	63	35.878	Caenorhabditis_elegans
ENSPSIG00000013571	EXOSC1	98	81.818	ENSCJAG00000016586	EXOSC1	75	82.192	Callithrix_jacchus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCAFG00000009068	EXOSC1	71	80.822	Canis_familiaris
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCAFG00020006002	EXOSC1	71	80.822	Canis_lupus_dingo
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCHIG00000015253	EXOSC1	75	81.507	Capra_hircus
ENSPSIG00000013571	EXOSC1	98	80.992	ENSTSYG00000000760	EXOSC1	75	80.822	Carlito_syrichta
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCPOG00000001173	EXOSC1	75	82.192	Cavia_porcellus
ENSPSIG00000013571	EXOSC1	98	80.992	ENSCATG00000034114	EXOSC1	75	82.192	Cercocebus_atys
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCLAG00000002463	EXOSC1	75	82.192	Chinchilla_lanigera
ENSPSIG00000013571	EXOSC1	98	79.508	ENSCSAG00000005870	EXOSC1	75	81.507	Chlorocebus_sabaeus
ENSPSIG00000013571	EXOSC1	91	79.646	ENSCHOG00000006477	EXOSC1	60	79.646	Choloepus_hoffmanni
ENSPSIG00000013571	EXOSC1	97	51.667	ENSCING00000022734	-	70	48.630	Ciona_intestinalis
ENSPSIG00000013571	EXOSC1	97	54.167	ENSCSAVG00000010865	-	89	48.045	Ciona_savignyi
ENSPSIG00000013571	EXOSC1	98	80.992	ENSCANG00000034159	EXOSC1	75	82.192	Colobus_angolensis_palliatus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCGRG00001000335	Exosc1	75	81.507	Cricetulus_griseus_chok1gshd
ENSPSIG00000013571	EXOSC1	98	81.148	ENSCGRG00000011602	Exosc1	75	81.507	Cricetulus_griseus_crigri
ENSPSIG00000013571	EXOSC1	98	77.686	ENSCSEG00000007895	exosc1	69	77.686	Cynoglossus_semilaevis
ENSPSIG00000013571	EXOSC1	98	73.554	ENSCVAG00000016748	exosc1	91	63.158	Cyprinodon_variegatus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSDARG00000059841	exosc1	91	66.842	Danio_rerio
ENSPSIG00000013571	EXOSC1	60	75.676	ENSDNOG00000007983	EXOSC1	66	78.571	Dasypus_novemcinctus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSDORG00000016528	Exosc1	75	82.192	Dipodomys_ordii
ENSPSIG00000013571	EXOSC1	90	46.957	FBgn0032346	Csl4	70	44.444	Drosophila_melanogaster
ENSPSIG00000013571	EXOSC1	98	81.148	ENSETEG00000002469	-	75	80.822	Echinops_telfairi
ENSPSIG00000013571	EXOSC1	98	68.852	ENSEBUG00000008164	exosc1	91	54.255	Eptatretus_burgeri
ENSPSIG00000013571	EXOSC1	99	81.301	ENSEASG00005008684	EXOSC1	74	74.286	Equus_asinus_asinus
ENSPSIG00000013571	EXOSC1	98	80.328	ENSEEUG00000005647	EXOSC1	75	80.822	Erinaceus_europaeus
ENSPSIG00000013571	EXOSC1	97	80.000	ENSELUG00000017369	exosc1	69	80.000	Esox_lucius
ENSPSIG00000013571	EXOSC1	98	81.818	ENSFCAG00000040563	EXOSC1	71	81.818	Felis_catus
ENSPSIG00000013571	EXOSC1	98	82.787	ENSFALG00000008450	EXOSC1	75	85.034	Ficedula_albicollis
ENSPSIG00000013571	EXOSC1	98	81.148	ENSFDAG00000000846	EXOSC1	75	82.192	Fukomys_damarensis
ENSPSIG00000013571	EXOSC1	98	74.380	ENSFHEG00000009154	exosc1	91	64.706	Fundulus_heteroclitus
ENSPSIG00000013571	EXOSC1	98	78.512	ENSGMOG00000008993	exosc1	91	65.263	Gadus_morhua
ENSPSIG00000013571	EXOSC1	100	83.065	ENSGALG00000039917	EXOSC1	100	84.247	Gallus_gallus
ENSPSIG00000013571	EXOSC1	98	74.380	ENSGAFG00000010265	exosc1	75	71.975	Gambusia_affinis
ENSPSIG00000013571	EXOSC1	98	79.339	ENSGACG00000018936	exosc1	91	66.316	Gasterosteus_aculeatus
ENSPSIG00000013571	EXOSC1	98	88.525	ENSGAGG00000019192	EXOSC1	77	88.079	Gopherus_agassizii
ENSPSIG00000013571	EXOSC1	98	80.992	ENSGGOG00000003099	EXOSC1	71	80.992	Gorilla_gorilla
ENSPSIG00000013571	EXOSC1	98	80.165	ENSHBUG00000017857	exosc1	92	66.316	Haplochromis_burtoni
ENSPSIG00000013571	EXOSC1	98	81.148	ENSHGLG00000016927	EXOSC1	75	82.192	Heterocephalus_glaber_female
ENSPSIG00000013571	EXOSC1	98	81.148	ENSHGLG00100012208	EXOSC1	75	82.192	Heterocephalus_glaber_male
ENSPSIG00000013571	EXOSC1	98	77.686	ENSHCOG00000019882	exosc1	75	78.082	Hippocampus_comes
ENSPSIG00000013571	EXOSC1	98	79.339	ENSIPUG00000007685	exosc1	91	66.845	Ictalurus_punctatus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSSTOG00000006615	EXOSC1	75	81.507	Ictidomys_tridecemlineatus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSJJAG00000013311	Exosc1	75	80.822	Jaculus_jaculus
ENSPSIG00000013571	EXOSC1	98	78.512	ENSKMAG00000001202	exosc1	75	64.737	Kryptolebias_marmoratus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSLBEG00000011448	exosc1	78	76.433	Labrus_bergylta
ENSPSIG00000013571	EXOSC1	65	81.395	ENSLOCG00000003776	exosc1	89	50.259	Lepisosteus_oculatus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSLAFG00000015983	EXOSC1	75	81.507	Loxodonta_africana
ENSPSIG00000013571	EXOSC1	98	80.992	ENSMFAG00000001493	EXOSC1	75	82.192	Macaca_fascicularis
ENSPSIG00000013571	EXOSC1	98	80.992	ENSMMUG00000020028	EXOSC1	75	80.000	Macaca_mulatta
ENSPSIG00000013571	EXOSC1	98	80.992	ENSMNEG00000029816	EXOSC1	75	82.192	Macaca_nemestrina
ENSPSIG00000013571	EXOSC1	98	79.675	ENSMLEG00000027643	EXOSC1	75	82.192	Mandrillus_leucophaeus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSMAMG00000012200	exosc1	91	66.316	Mastacembelus_armatus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSMZEG00005007042	exosc1	91	66.316	Maylandia_zebra
ENSPSIG00000013571	EXOSC1	98	81.818	ENSMAUG00000020462	-	71	81.818	Mesocricetus_auratus
ENSPSIG00000013571	EXOSC1	98	81.818	ENSMICG00000007664	EXOSC1	71	81.818	Microcebus_murinus
ENSPSIG00000013571	EXOSC1	98	77.049	ENSMOCG00000017124	-	74	78.767	Microtus_ochrogaster
ENSPSIG00000013571	EXOSC1	98	81.148	ENSMOCG00000006004	-	75	81.507	Microtus_ochrogaster
ENSPSIG00000013571	EXOSC1	65	86.250	ENSMMOG00000021403	exosc1	91	51.579	Mola_mola
ENSPSIG00000013571	EXOSC1	98	79.675	ENSMODG00000004213	EXOSC1	78	78.289	Monodelphis_domestica
ENSPSIG00000013571	EXOSC1	98	80.165	ENSMALG00000007061	exosc1	76	76.433	Monopterus_albus
ENSPSIG00000013571	EXOSC1	98	81.148	MGP_CAROLIEiJ_G0022959	Exosc1	75	80.822	Mus_caroli
ENSPSIG00000013571	EXOSC1	98	81.148	ENSMUSG00000034321	Exosc1	75	80.822	Mus_musculus
ENSPSIG00000013571	EXOSC1	98	81.148	MGP_PahariEiJ_G0014449	Exosc1	75	81.507	Mus_pahari
ENSPSIG00000013571	EXOSC1	98	81.148	MGP_SPRETEiJ_G0023880	Exosc1	75	80.822	Mus_spretus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSMPUG00000017044	EXOSC1	75	81.507	Mustela_putorius_furo
ENSPSIG00000013571	EXOSC1	98	81.148	ENSMLUG00000009228	EXOSC1	75	82.192	Myotis_lucifugus
ENSPSIG00000013571	EXOSC1	98	81.967	ENSNGAG00000022033	Exosc1	75	81.507	Nannospalax_galili
ENSPSIG00000013571	EXOSC1	65	88.750	ENSNBRG00000024007	exosc1	52	88.750	Neolamprologus_brichardi
ENSPSIG00000013571	EXOSC1	98	80.992	ENSNLEG00000013872	EXOSC1	75	82.192	Nomascus_leucogenys
ENSPSIG00000013571	EXOSC1	98	80.328	ENSOPRG00000005065	EXOSC1	75	81.507	Ochotona_princeps
ENSPSIG00000013571	EXOSC1	98	81.148	ENSODEG00000016709	EXOSC1	75	82.192	Octodon_degus
ENSPSIG00000013571	EXOSC1	98	80.992	ENSONIG00000017683	exosc1	91	66.842	Oreochromis_niloticus
ENSPSIG00000013571	EXOSC1	93	80.000	ENSOANG00000006563	EXOSC1	98	79.839	Ornithorhynchus_anatinus
ENSPSIG00000013571	EXOSC1	98	80.488	ENSOCUG00000011898	-	75	81.633	Oryctolagus_cuniculus
ENSPSIG00000013571	EXOSC1	98	76.230	ENSOCUG00000026461	-	75	78.082	Oryctolagus_cuniculus
ENSPSIG00000013571	EXOSC1	98	77.049	ENSORLG00000011595	exosc1	91	64.398	Oryzias_latipes
ENSPSIG00000013571	EXOSC1	98	77.049	ENSORLG00020005831	exosc1	91	64.398	Oryzias_latipes_hni
ENSPSIG00000013571	EXOSC1	98	77.049	ENSORLG00015004317	exosc1	91	64.398	Oryzias_latipes_hsok
ENSPSIG00000013571	EXOSC1	81	74.257	ENSOMEG00000013907	exosc1	90	55.789	Oryzias_melastigma
ENSPSIG00000013571	EXOSC1	98	80.328	ENSOGAG00000016259	EXOSC1	75	81.507	Otolemur_garnettii
ENSPSIG00000013571	EXOSC1	98	81.967	ENSOARG00000010136	EXOSC1	75	82.192	Ovis_aries
ENSPSIG00000013571	EXOSC1	98	79.839	ENSPPAG00000039842	EXOSC1	75	81.757	Pan_paniscus
ENSPSIG00000013571	EXOSC1	98	81.818	ENSPPRG00000023366	EXOSC1	75	81.507	Panthera_pardus
ENSPSIG00000013571	EXOSC1	98	81.818	ENSPTIG00000017701	EXOSC1	75	81.507	Panthera_tigris_altaica
ENSPSIG00000013571	EXOSC1	98	80.992	ENSPTRG00000002808	EXOSC1	75	82.192	Pan_troglodytes
ENSPSIG00000013571	EXOSC1	98	80.992	ENSPANG00000021324	EXOSC1	75	82.192	Papio_anubis
ENSPSIG00000013571	EXOSC1	98	79.339	ENSPKIG00000016037	exosc1	91	65.789	Paramormyrops_kingsleyae
ENSPSIG00000013571	EXOSC1	98	78.512	ENSPMGG00000014002	exosc1	72	78.512	Periophthalmus_magnuspinnatus
ENSPSIG00000013571	EXOSC1	98	81.148	ENSPEMG00000010710	-	75	81.507	Peromyscus_maniculatus_bairdii
ENSPSIG00000013571	EXOSC1	98	70.492	ENSPMAG00000000195	exosc1	91	59.043	Petromyzon_marinus
ENSPSIG00000013571	EXOSC1	98	80.328	ENSPCIG00000002210	EXOSC1	77	78.146	Phascolarctos_cinereus
ENSPSIG00000013571	EXOSC1	98	74.380	ENSPFOG00000006755	exosc1	75	71.975	Poecilia_formosa
ENSPSIG00000013571	EXOSC1	98	74.380	ENSPLAG00000005880	exosc1	75	75.207	Poecilia_latipinna
ENSPSIG00000013571	EXOSC1	98	74.380	ENSPMEG00000015598	exosc1	75	71.975	Poecilia_mexicana
ENSPSIG00000013571	EXOSC1	98	74.380	ENSPREG00000000405	exosc1	68	75.207	Poecilia_reticulata
ENSPSIG00000013571	EXOSC1	98	80.328	ENSPPYG00000002531	EXOSC1	75	82.192	Pongo_abelii
ENSPSIG00000013571	EXOSC1	98	81.148	ENSPCAG00000009135	EXOSC1	75	81.507	Procavia_capensis
ENSPSIG00000013571	EXOSC1	98	79.339	ENSPCOG00000027539	EXOSC1	76	78.146	Propithecus_coquereli
ENSPSIG00000013571	EXOSC1	98	81.148	ENSPVAG00000003372	EXOSC1	75	82.192	Pteropus_vampyrus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSPNYG00000021745	exosc1	91	66.316	Pundamilia_nyererei
ENSPSIG00000013571	EXOSC1	98	80.165	ENSPNAG00000001944	exosc1	91	65.263	Pygocentrus_nattereri
ENSPSIG00000013571	EXOSC1	98	81.148	ENSRNOG00000048708	Exosc1	75	81.507	Rattus_norvegicus
ENSPSIG00000013571	EXOSC1	98	80.992	ENSRBIG00000035618	EXOSC1	75	82.192	Rhinopithecus_bieti
ENSPSIG00000013571	EXOSC1	98	80.992	ENSRROG00000032589	EXOSC1	71	80.992	Rhinopithecus_roxellana
ENSPSIG00000013571	EXOSC1	98	81.818	ENSSBOG00000000359	EXOSC1	75	82.192	Saimiri_boliviensis_boliviensis
ENSPSIG00000013571	EXOSC1	98	79.675	ENSSHAG00000018219	EXOSC1	100	79.592	Sarcophilus_harrisii
ENSPSIG00000013571	EXOSC1	98	76.033	ENSSFOG00015016289	-	91	62.632	Scleropages_formosus
ENSPSIG00000013571	EXOSC1	98	79.339	ENSSFOG00015009069	exosc1	75	78.082	Scleropages_formosus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSSMAG00000003721	exosc1	91	65.789	Scophthalmus_maximus
ENSPSIG00000013571	EXOSC1	98	80.165	ENSSDUG00000002993	exosc1	91	66.316	Seriola_dumerili
ENSPSIG00000013571	EXOSC1	98	80.165	ENSSLDG00000025181	exosc1	91	66.316	Seriola_lalandi_dorsalis
ENSPSIG00000013571	EXOSC1	98	80.992	ENSSARG00000000162	EXOSC1	62	80.992	Sorex_araneus
ENSPSIG00000013571	EXOSC1	98	81.818	ENSSPUG00000012263	EXOSC1	74	83.333	Sphenodon_punctatus
ENSPSIG00000013571	EXOSC1	98	67.769	ENSSPAG00000016792	exosc1	75	58.421	Stegastes_partitus
ENSPSIG00000013571	EXOSC1	98	80.328	ENSSSCG00000010518	EXOSC1	68	80.137	Sus_scrofa
ENSPSIG00000013571	EXOSC1	98	82.787	ENSTGUG00000009692	EXOSC1	76	83.673	Taeniopygia_guttata
ENSPSIG00000013571	EXOSC1	98	69.421	ENSTRUG00000007706	exosc1	76	70.548	Takifugu_rubripes
ENSPSIG00000013571	EXOSC1	98	67.742	ENSTNIG00000014079	exosc1	75	69.799	Tetraodon_nigroviridis
ENSPSIG00000013571	EXOSC1	98	80.992	ENSTBEG00000006011	EXOSC1	69	81.481	Tupaia_belangeri
ENSPSIG00000013571	EXOSC1	98	81.148	ENSTTRG00000009887	EXOSC1	79	81.507	Tursiops_truncatus
ENSPSIG00000013571	EXOSC1	65	90.123	ENSUAMG00000010266	EXOSC1	53	90.123	Ursus_americanus
ENSPSIG00000013571	EXOSC1	65	90.123	ENSUMAG00000022002	EXOSC1	53	90.123	Ursus_maritimus
ENSPSIG00000013571	EXOSC1	98	82.787	ENSXETG00000003434	exosc1	75	80.137	Xenopus_tropicalis
ENSPSIG00000013571	EXOSC1	97	75.000	ENSXCOG00000014499	exosc1	92	75.833	Xiphophorus_couchianus
ENSPSIG00000013571	EXOSC1	98	74.380	ENSXMAG00000023382	exosc1	68	75.207	Xiphophorus_maculatus