EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000013945 (Gene tree)
Gene ID: 102452760
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 9781 bases
Position: chrJH210458.1:1638249-1648029
Accession: 102452760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015664	PseudoU_synth_2	PF00849.22	8.6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015738	RPUSD1-201	1427	XM_006129295	ENSPSIP00000015664	303 (aa)	XP_006129357	K7G5V3

Gene Model

Click here to download ENSPSIG00000013945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000013945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000013945	RPUSD1	100	65.049	ENSG00000007376	RPUSD1	100	76.786	Homo_sapiens
ENSPSIG00000013945	RPUSD1	99	63.366	ENSAPOG00000022221	rpusd1	98	64.145	Acanthochromis_polyacanthus
ENSPSIG00000013945	RPUSD1	100	67.541	ENSAMEG00000007461	RPUSD1	99	67.541	Ailuropoda_melanoleuca
ENSPSIG00000013945	RPUSD1	99	61.889	ENSACIG00000015863	rpusd1	98	62.903	Amphilophus_citrinellus
ENSPSIG00000013945	RPUSD1	99	63.158	ENSAOCG00000021975	rpusd1	95	63.158	Amphiprion_ocellaris
ENSPSIG00000013945	RPUSD1	99	63.487	ENSAPEG00000001316	rpusd1	95	63.487	Amphiprion_percula
ENSPSIG00000013945	RPUSD1	99	63.158	ENSATEG00000002984	rpusd1	98	63.158	Anabas_testudineus
ENSPSIG00000013945	RPUSD1	78	80.672	ENSAPLG00000012316	RPUSD1	98	80.672	Anas_platyrhynchos
ENSPSIG00000013945	RPUSD1	100	78.548	ENSACAG00000008953	RPUSD1	100	78.548	Anolis_carolinensis
ENSPSIG00000013945	RPUSD1	100	64.725	ENSANAG00000024709	RPUSD1	99	64.725	Aotus_nancymaae
ENSPSIG00000013945	RPUSD1	99	62.418	ENSACLG00000013692	rpusd1	98	62.418	Astatotilapia_calliptera
ENSPSIG00000013945	RPUSD1	100	62.500	ENSAMXG00000019802	rpusd1	100	62.500	Astyanax_mexicanus
ENSPSIG00000013945	RPUSD1	100	67.869	ENSBTAG00000000179	RPUSD1	99	67.869	Bos_taurus
ENSPSIG00000013945	RPUSD1	100	64.725	ENSCJAG00000012253	RPUSD1	99	64.725	Callithrix_jacchus
ENSPSIG00000013945	RPUSD1	100	66.557	ENSCAFG00000019614	RPUSD1	99	66.885	Canis_familiaris
ENSPSIG00000013945	RPUSD1	100	66.557	ENSCAFG00020008891	RPUSD1	99	66.885	Canis_lupus_dingo
ENSPSIG00000013945	RPUSD1	100	67.869	ENSCHIG00000012872	RPUSD1	99	67.857	Capra_hircus
ENSPSIG00000013945	RPUSD1	100	65.147	ENSTSYG00000036934	RPUSD1	92	75.833	Carlito_syrichta
ENSPSIG00000013945	RPUSD1	100	65.686	ENSCAPG00000014219	RPUSD1	99	65.686	Cavia_aperea
ENSPSIG00000013945	RPUSD1	100	65.686	ENSCPOG00000034604	RPUSD1	99	65.686	Cavia_porcellus
ENSPSIG00000013945	RPUSD1	100	65.372	ENSCCAG00000034385	RPUSD1	99	65.372	Cebus_capucinus
ENSPSIG00000013945	RPUSD1	100	66.019	ENSCATG00000042983	RPUSD1	92	77.500	Cercocebus_atys
ENSPSIG00000013945	RPUSD1	100	64.590	ENSCLAG00000013966	RPUSD1	99	64.286	Chinchilla_lanigera
ENSPSIG00000013945	RPUSD1	100	65.696	ENSCSAG00000012121	RPUSD1	99	65.696	Chlorocebus_sabaeus
ENSPSIG00000013945	RPUSD1	99	92.384	ENSCPBG00000021101	RPUSD1	99	92.384	Chrysemys_picta_bellii
ENSPSIG00000013945	RPUSD1	90	69.343	ENSCANG00000028576	RPUSD1	92	77.500	Colobus_angolensis_palliatus
ENSPSIG00000013945	RPUSD1	100	67.869	ENSCGRG00001014253	Rpusd1	99	67.869	Cricetulus_griseus_chok1gshd
ENSPSIG00000013945	RPUSD1	100	67.869	ENSCGRG00000017995	Rpusd1	99	67.869	Cricetulus_griseus_crigri
ENSPSIG00000013945	RPUSD1	100	62.376	ENSCSEG00000018512	rpusd1	100	62.376	Cynoglossus_semilaevis
ENSPSIG00000013945	RPUSD1	99	64.145	ENSCVAG00000022746	rpusd1	98	64.145	Cyprinodon_variegatus
ENSPSIG00000013945	RPUSD1	100	68.750	ENSDARG00000060192	rpusd1	100	68.750	Danio_rerio
ENSPSIG00000013945	RPUSD1	100	65.902	ENSDNOG00000003721	RPUSD1	99	65.902	Dasypus_novemcinctus
ENSPSIG00000013945	RPUSD1	100	65.574	ENSDORG00000026656	Rpusd1	99	65.902	Dipodomys_ordii
ENSPSIG00000013945	RPUSD1	99	47.950	ENSEBUG00000008767	rpusd1	93	47.950	Eptatretus_burgeri
ENSPSIG00000013945	RPUSD1	100	65.176	ENSEASG00005018421	RPUSD1	75	65.815	Equus_asinus_asinus
ENSPSIG00000013945	RPUSD1	99	61.842	ENSELUG00000014307	rpusd1	88	61.342	Esox_lucius
ENSPSIG00000013945	RPUSD1	100	66.230	ENSFCAG00000010359	RPUSD1	99	66.230	Felis_catus
ENSPSIG00000013945	RPUSD1	100	83.168	ENSFALG00000003211	RPUSD1	100	83.168	Ficedula_albicollis
ENSPSIG00000013945	RPUSD1	100	64.286	ENSFDAG00000013398	RPUSD1	99	64.286	Fukomys_damarensis
ENSPSIG00000013945	RPUSD1	99	62.583	ENSFHEG00000004736	rpusd1	98	63.487	Fundulus_heteroclitus
ENSPSIG00000013945	RPUSD1	99	60.984	ENSGMOG00000010756	rpusd1	99	62.092	Gadus_morhua
ENSPSIG00000013945	RPUSD1	100	83.828	ENSGALG00000005315	RPUSD1	100	83.828	Gallus_gallus
ENSPSIG00000013945	RPUSD1	99	63.576	ENSGAFG00000009886	rpusd1	98	63.576	Gambusia_affinis
ENSPSIG00000013945	RPUSD1	98	62.500	ENSGACG00000014276	rpusd1	98	63.072	Gasterosteus_aculeatus
ENSPSIG00000013945	RPUSD1	99	91.060	ENSGAGG00000004181	RPUSD1	99	91.060	Gopherus_agassizii
ENSPSIG00000013945	RPUSD1	100	65.372	ENSGGOG00000013997	RPUSD1	92	75.000	Gorilla_gorilla
ENSPSIG00000013945	RPUSD1	99	62.745	ENSHBUG00000023728	rpusd1	98	62.745	Haplochromis_burtoni
ENSPSIG00000013945	RPUSD1	100	64.918	ENSHGLG00000002595	RPUSD1	99	64.610	Heterocephalus_glaber_female
ENSPSIG00000013945	RPUSD1	100	64.918	ENSHGLG00100014303	RPUSD1	99	64.610	Heterocephalus_glaber_male
ENSPSIG00000013945	RPUSD1	99	62.791	ENSHCOG00000002390	rpusd1	99	62.791	Hippocampus_comes
ENSPSIG00000013945	RPUSD1	99	66.447	ENSIPUG00000001570	rpusd1	99	66.447	Ictalurus_punctatus
ENSPSIG00000013945	RPUSD1	100	66.340	ENSSTOG00000004276	RPUSD1	99	66.340	Ictidomys_tridecemlineatus
ENSPSIG00000013945	RPUSD1	100	66.885	ENSJJAG00000015696	Rpusd1	99	66.993	Jaculus_jaculus
ENSPSIG00000013945	RPUSD1	99	63.333	ENSKMAG00000017287	rpusd1	98	63.333	Kryptolebias_marmoratus
ENSPSIG00000013945	RPUSD1	99	63.816	ENSLBEG00000013354	RPUSD1	98	63.816	Labrus_bergylta
ENSPSIG00000013945	RPUSD1	99	63.816	ENSLBEG00000022502	rpusd1	98	63.816	Labrus_bergylta
ENSPSIG00000013945	RPUSD1	99	77.152	ENSLACG00000008869	RPUSD1	99	77.152	Latimeria_chalumnae
ENSPSIG00000013945	RPUSD1	71	80.841	ENSLOCG00000005682	rpusd1	99	80.841	Lepisosteus_oculatus
ENSPSIG00000013945	RPUSD1	100	65.147	ENSLAFG00000002115	RPUSD1	99	65.147	Loxodonta_africana
ENSPSIG00000013945	RPUSD1	100	66.019	ENSMFAG00000003961	RPUSD1	92	77.500	Macaca_fascicularis
ENSPSIG00000013945	RPUSD1	100	66.019	ENSMMUG00000000842	RPUSD1	92	77.500	Macaca_mulatta
ENSPSIG00000013945	RPUSD1	100	66.019	ENSMNEG00000042712	RPUSD1	92	77.500	Macaca_nemestrina
ENSPSIG00000013945	RPUSD1	100	66.019	ENSMLEG00000030591	RPUSD1	92	77.500	Mandrillus_leucophaeus
ENSPSIG00000013945	RPUSD1	99	62.215	ENSMAMG00000004735	rpusd1	98	62.623	Mastacembelus_armatus
ENSPSIG00000013945	RPUSD1	99	62.418	ENSMZEG00005003214	rpusd1	98	62.418	Maylandia_zebra
ENSPSIG00000013945	RPUSD1	99	82.943	ENSMGAG00000005447	RPUSD1	100	82.943	Meleagris_gallopavo
ENSPSIG00000013945	RPUSD1	83	68.627	ENSMAUG00000019998	Rpusd1	97	68.627	Mesocricetus_auratus
ENSPSIG00000013945	RPUSD1	100	66.557	ENSMICG00000017561	RPUSD1	92	78.333	Microcebus_murinus
ENSPSIG00000013945	RPUSD1	100	67.541	ENSMOCG00000014082	Rpusd1	99	67.647	Microtus_ochrogaster
ENSPSIG00000013945	RPUSD1	99	60.984	ENSMMOG00000012569	rpusd1	99	61.794	Mola_mola
ENSPSIG00000013945	RPUSD1	100	73.355	ENSMODG00000016882	RPUSD1	99	73.355	Monodelphis_domestica
ENSPSIG00000013945	RPUSD1	99	62.623	ENSMALG00000017818	rpusd1	98	64.821	Monopterus_albus
ENSPSIG00000013945	RPUSD1	100	67.213	MGP_CAROLIEiJ_G0021244	Rpusd1	99	67.541	Mus_caroli
ENSPSIG00000013945	RPUSD1	100	67.541	ENSMUSG00000041199	Rpusd1	99	67.869	Mus_musculus
ENSPSIG00000013945	RPUSD1	100	66.557	MGP_PahariEiJ_G0023562	Rpusd1	99	67.427	Mus_pahari
ENSPSIG00000013945	RPUSD1	100	67.541	MGP_SPRETEiJ_G0022155	Rpusd1	99	67.869	Mus_spretus
ENSPSIG00000013945	RPUSD1	100	64.590	ENSMPUG00000015897	RPUSD1	99	64.918	Mustela_putorius_furo
ENSPSIG00000013945	RPUSD1	100	66.558	ENSMLUG00000001089	RPUSD1	99	66.558	Myotis_lucifugus
ENSPSIG00000013945	RPUSD1	100	66.557	ENSNGAG00000003595	Rpusd1	99	66.667	Nannospalax_galili
ENSPSIG00000013945	RPUSD1	99	63.333	ENSNBRG00000006457	rpusd1	98	64.784	Neolamprologus_brichardi
ENSPSIG00000013945	RPUSD1	55	53.488	ENSNLEG00000008424	-	98	54.651	Nomascus_leucogenys
ENSPSIG00000013945	RPUSD1	100	73.927	ENSMEUG00000016049	RPUSD1	99	73.927	Notamacropus_eugenii
ENSPSIG00000013945	RPUSD1	100	60.328	ENSOPRG00000008340	RPUSD1	99	60.328	Ochotona_princeps
ENSPSIG00000013945	RPUSD1	100	65.584	ENSODEG00000016945	RPUSD1	99	65.584	Octodon_degus
ENSPSIG00000013945	RPUSD1	99	62.295	ENSONIG00000015672	rpusd1	99	62.295	Oreochromis_niloticus
ENSPSIG00000013945	RPUSD1	99	63.245	ENSORLG00000013009	rpusd1	99	63.245	Oryzias_latipes
ENSPSIG00000013945	RPUSD1	99	62.583	ENSORLG00020010382	rpusd1	99	62.583	Oryzias_latipes_hni
ENSPSIG00000013945	RPUSD1	99	62.583	ENSORLG00015021354	rpusd1	99	62.583	Oryzias_latipes_hsok
ENSPSIG00000013945	RPUSD1	99	64.333	ENSOMEG00000021426	rpusd1	98	64.333	Oryzias_melastigma
ENSPSIG00000013945	RPUSD1	100	66.019	ENSOGAG00000003795	RPUSD1	99	65.705	Otolemur_garnettii
ENSPSIG00000013945	RPUSD1	100	68.197	ENSOARG00000014254	RPUSD1	99	67.742	Ovis_aries
ENSPSIG00000013945	RPUSD1	100	64.725	ENSPPAG00000034797	RPUSD1	92	75.000	Pan_paniscus
ENSPSIG00000013945	RPUSD1	100	66.230	ENSPPRG00000012389	RPUSD1	99	66.230	Panthera_pardus
ENSPSIG00000013945	RPUSD1	100	65.902	ENSPTIG00000008545	RPUSD1	78	81.553	Panthera_tigris_altaica
ENSPSIG00000013945	RPUSD1	100	64.725	ENSPTRG00000007565	RPUSD1	92	75.000	Pan_troglodytes
ENSPSIG00000013945	RPUSD1	100	66.343	ENSPANG00000024401	RPUSD1	92	77.500	Papio_anubis
ENSPSIG00000013945	RPUSD1	100	68.627	ENSPKIG00000018890	rpusd1	91	68.627	Paramormyrops_kingsleyae
ENSPSIG00000013945	RPUSD1	99	62.171	ENSPMGG00000014950	rpusd1	99	62.500	Periophthalmus_magnuspinnatus
ENSPSIG00000013945	RPUSD1	100	67.541	ENSPEMG00000000497	Rpusd1	99	67.647	Peromyscus_maniculatus_bairdii
ENSPSIG00000013945	RPUSD1	99	52.980	ENSPMAG00000001563	rpusd1	99	52.980	Petromyzon_marinus
ENSPSIG00000013945	RPUSD1	100	75.658	ENSPCIG00000021216	-	93	75.658	Phascolarctos_cinereus
ENSPSIG00000013945	RPUSD1	99	65.449	ENSPFOG00000007946	rpusd1	98	65.449	Poecilia_formosa
ENSPSIG00000013945	RPUSD1	99	65.449	ENSPLAG00000011925	rpusd1	98	65.449	Poecilia_latipinna
ENSPSIG00000013945	RPUSD1	99	64.784	ENSPMEG00000002910	rpusd1	98	64.784	Poecilia_mexicana
ENSPSIG00000013945	RPUSD1	99	64.570	ENSPREG00000019851	rpusd1	98	64.570	Poecilia_reticulata
ENSPSIG00000013945	RPUSD1	100	52.117	ENSPCAG00000002258	RPUSD1	99	52.117	Procavia_capensis
ENSPSIG00000013945	RPUSD1	100	65.372	ENSPCOG00000022582	RPUSD1	79	85.437	Propithecus_coquereli
ENSPSIG00000013945	RPUSD1	100	65.372	ENSPVAG00000013104	RPUSD1	99	65.372	Pteropus_vampyrus
ENSPSIG00000013945	RPUSD1	99	62.745	ENSPNYG00000024076	rpusd1	98	63.333	Pundamilia_nyererei
ENSPSIG00000013945	RPUSD1	100	60.586	ENSPNAG00000013806	rpusd1	100	60.586	Pygocentrus_nattereri
ENSPSIG00000013945	RPUSD1	100	67.213	ENSRNOG00000023639	Rpusd1	99	67.541	Rattus_norvegicus
ENSPSIG00000013945	RPUSD1	100	65.696	ENSRBIG00000030238	RPUSD1	92	77.500	Rhinopithecus_bieti
ENSPSIG00000013945	RPUSD1	100	65.696	ENSRROG00000036663	RPUSD1	92	77.500	Rhinopithecus_roxellana
ENSPSIG00000013945	RPUSD1	100	64.590	ENSSBOG00000033063	RPUSD1	99	65.246	Saimiri_boliviensis_boliviensis
ENSPSIG00000013945	RPUSD1	100	74.257	ENSSHAG00000013500	RPUSD1	99	74.257	Sarcophilus_harrisii
ENSPSIG00000013945	RPUSD1	99	69.536	ENSSFOG00015014394	rpusd1	99	69.536	Scleropages_formosus
ENSPSIG00000013945	RPUSD1	99	63.158	ENSSMAG00000008045	rpusd1	91	63.487	Scophthalmus_maximus
ENSPSIG00000013945	RPUSD1	87	70.342	ENSSDUG00000001829	rpusd1	95	64.803	Seriola_dumerili
ENSPSIG00000013945	RPUSD1	87	70.342	ENSSLDG00000020853	rpusd1	95	64.803	Seriola_lalandi_dorsalis
ENSPSIG00000013945	RPUSD1	54	77.246	ENSSARG00000011187	-	100	77.246	Sorex_araneus
ENSPSIG00000013945	RPUSD1	63	77.083	ENSSPUG00000005119	-	100	77.083	Sphenodon_punctatus
ENSPSIG00000013945	RPUSD1	99	64.379	ENSSPAG00000012708	rpusd1	98	64.379	Stegastes_partitus
ENSPSIG00000013945	RPUSD1	100	66.019	ENSSSCG00000008000	RPUSD1	98	73.228	Sus_scrofa
ENSPSIG00000013945	RPUSD1	83	89.723	ENSTGUG00000015375	RPUSD1	100	89.723	Taeniopygia_guttata
ENSPSIG00000013945	RPUSD1	99	61.765	ENSTRUG00000003041	rpusd1	98	62.215	Takifugu_rubripes
ENSPSIG00000013945	RPUSD1	99	59.000	ENSTNIG00000002660	rpusd1	99	59.000	Tetraodon_nigroviridis
ENSPSIG00000013945	RPUSD1	100	67.638	ENSTTRG00000010167	RPUSD1	99	67.638	Tursiops_truncatus
ENSPSIG00000013945	RPUSD1	100	66.885	ENSUAMG00000012736	RPUSD1	99	66.885	Ursus_americanus
ENSPSIG00000013945	RPUSD1	100	66.885	ENSUMAG00000021174	RPUSD1	99	67.213	Ursus_maritimus
ENSPSIG00000013945	RPUSD1	100	68.301	ENSVVUG00000012357	RPUSD1	99	68.301	Vulpes_vulpes
ENSPSIG00000013945	RPUSD1	100	71.287	ENSXETG00000007184	rpusd1	99	71.287	Xenopus_tropicalis
ENSPSIG00000013945	RPUSD1	99	63.245	ENSXCOG00000017930	rpusd1	98	63.245	Xiphophorus_couchianus
ENSPSIG00000013945	RPUSD1	99	63.576	ENSXMAG00000024084	rpusd1	98	63.576	Xiphophorus_maculatus