EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000014118 (Gene tree)
Gene ID: 102446405
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 143460 bases
Position: chrJH212377.1:1314933-1458392
Accession: 102446405
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	1	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	2	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	3	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	4	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	5	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	6	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	7	8
ENSPSIP00000015986	PUF	PF00806.19	9.4e-73	8	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	1	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	2	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	3	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	4	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	5	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	6	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	7	8
ENSPSIP00000015982	PUF	PF00806.19	4.4e-72	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000016057	PUM1-201	7351	XM_006134556	ENSPSIP00000015982	1188 (aa)	XP_006134618	K7G6S1
ENSPSIT00000016061	PUM1-202	4944	-	ENSPSIP00000015986	1112 (aa)	-	K7G6S5

Gene Model

Click here to download ENSPSIG00000014118's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000014118	PUM1	98	76.483	ENSPSIG00000011626	PUM2	99	72.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014118	PUM1	100	97.980	ENSG00000134644	PUM1	100	98.130	Homo_sapiens
ENSPSIG00000014118	PUM1	90	91.807	ENSAPOG00000021632	pum1	100	91.807	Acanthochromis_polyacanthus
ENSPSIG00000014118	PUM1	100	97.899	ENSAMEG00000017656	PUM1	97	97.899	Ailuropoda_melanoleuca
ENSPSIG00000014118	PUM1	100	75.145	ENSACIG00000021013	pum1	100	77.318	Amphilophus_citrinellus
ENSPSIG00000014118	PUM1	90	91.807	ENSAOCG00000003944	pum1	100	91.807	Amphiprion_ocellaris
ENSPSIG00000014118	PUM1	90	91.807	ENSAPEG00000014550	pum1	100	91.807	Amphiprion_percula
ENSPSIG00000014118	PUM1	90	88.736	ENSATEG00000016004	pum1	100	91.807	Anabas_testudineus
ENSPSIG00000014118	PUM1	100	98.738	ENSAPLG00000009351	PUM1	100	98.738	Anas_platyrhynchos
ENSPSIG00000014118	PUM1	100	96.801	ENSACAG00000000682	PUM1	98	96.801	Anolis_carolinensis
ENSPSIG00000014118	PUM1	100	97.752	ENSANAG00000027865	PUM1	100	98.005	Aotus_nancymaae
ENSPSIG00000014118	PUM1	90	77.201	ENSACLG00000019354	pum1	100	79.741	Astatotilapia_calliptera
ENSPSIG00000014118	PUM1	100	79.264	ENSAMXG00000020607	pum1	96	79.181	Astyanax_mexicanus
ENSPSIG00000014118	PUM1	100	97.811	ENSBTAG00000018979	PUM1	100	98.792	Bos_taurus
ENSPSIG00000014118	PUM1	100	97.752	ENSCJAG00000006035	PUM1	100	98.068	Callithrix_jacchus
ENSPSIG00000014118	PUM1	100	95.711	ENSCAFG00000011205	PUM1	100	95.711	Canis_familiaris
ENSPSIG00000014118	PUM1	91	97.051	ENSCAFG00020024616	PUM1	99	97.533	Canis_lupus_dingo
ENSPSIG00000014118	PUM1	100	97.811	ENSCHIG00000012952	PUM1	100	98.309	Capra_hircus
ENSPSIG00000014118	PUM1	100	97.561	ENSTSYG00000008868	PUM1	100	97.880	Carlito_syrichta
ENSPSIG00000014118	PUM1	100	97.477	ENSCPOG00000031613	PUM1	100	97.756	Cavia_porcellus
ENSPSIG00000014118	PUM1	98	97.804	ENSCATG00000017991	PUM1	100	98.551	Cercocebus_atys
ENSPSIG00000014118	PUM1	100	97.561	ENSCLAG00000007662	PUM1	100	97.756	Chinchilla_lanigera
ENSPSIG00000014118	PUM1	100	97.000	ENSCSAG00000001028	PUM1	100	97.000	Chlorocebus_sabaeus
ENSPSIG00000014118	PUM1	93	94.676	ENSCHOG00000010245	PUM1	93	94.676	Choloepus_hoffmanni
ENSPSIG00000014118	PUM1	100	99.495	ENSCPBG00000009288	PUM1	100	99.517	Chrysemys_picta_bellii
ENSPSIG00000014118	PUM1	100	97.980	ENSCANG00000042606	PUM1	100	98.130	Colobus_angolensis_palliatus
ENSPSIG00000014118	PUM1	100	97.138	ENSCGRG00001024949	Pum1	100	97.272	Cricetulus_griseus_chok1gshd
ENSPSIG00000014118	PUM1	100	97.138	ENSCGRG00000014197	Pum1	100	97.272	Cricetulus_griseus_crigri
ENSPSIG00000014118	PUM1	90	76.481	ENSCSEG00000015981	pum1	100	78.651	Cynoglossus_semilaevis
ENSPSIG00000014118	PUM1	100	74.421	ENSCVAG00000007043	pum1	100	76.515	Cyprinodon_variegatus
ENSPSIG00000014118	PUM1	100	79.599	ENSDARG00000099256	pum1	100	79.515	Danio_rerio
ENSPSIG00000014118	PUM1	100	97.477	ENSDNOG00000010939	PUM1	100	97.477	Dasypus_novemcinctus
ENSPSIG00000014118	PUM1	85	97.585	ENSDORG00000001875	Pum1	100	97.585	Dipodomys_ordii
ENSPSIG00000014118	PUM1	88	92.969	ENSETEG00000004355	PUM1	87	92.969	Echinops_telfairi
ENSPSIG00000014118	PUM1	100	97.727	ENSEASG00005010813	PUM1	100	97.727	Equus_asinus_asinus
ENSPSIG00000014118	PUM1	100	97.561	ENSECAG00000021369	PUM1	100	97.561	Equus_caballus
ENSPSIG00000014118	PUM1	76	99.111	ENSEEUG00000003871	PUM1	74	99.111	Erinaceus_europaeus
ENSPSIG00000014118	PUM1	100	76.379	ENSELUG00000002409	pum1	100	83.767	Esox_lucius
ENSPSIG00000014118	PUM1	100	97.981	ENSFCAG00000010374	PUM1	100	98.792	Felis_catus
ENSPSIG00000014118	PUM1	100	97.236	ENSFALG00000001214	PUM1	97	97.236	Ficedula_albicollis
ENSPSIG00000014118	PUM1	100	97.477	ENSFDAG00000011319	PUM1	100	97.631	Fukomys_damarensis
ENSPSIG00000014118	PUM1	61	89.122	ENSGMOG00000010491	pum1	100	75.600	Gadus_morhua
ENSPSIG00000014118	PUM1	100	98.991	ENSGALG00000042598	PUM1	100	98.994	Gallus_gallus
ENSPSIG00000014118	PUM1	90	88.276	ENSGAFG00000015617	pum1	100	91.325	Gambusia_affinis
ENSPSIG00000014118	PUM1	100	75.248	ENSGACG00000005717	pum1	100	76.936	Gasterosteus_aculeatus
ENSPSIG00000014118	PUM1	100	99.159	ENSGAGG00000001290	PUM1	100	99.159	Gopherus_agassizii
ENSPSIG00000014118	PUM1	100	97.980	ENSGGOG00000011983	PUM1	100	98.130	Gorilla_gorilla
ENSPSIG00000014118	PUM1	100	74.834	ENSHBUG00000018718	pum1	100	77.012	Haplochromis_burtoni
ENSPSIG00000014118	PUM1	100	97.309	ENSHGLG00000013819	Pum1	100	97.506	Heterocephalus_glaber_female
ENSPSIG00000014118	PUM1	100	97.309	ENSHGLG00100008621	Pum1	100	97.506	Heterocephalus_glaber_male
ENSPSIG00000014118	PUM1	100	77.704	ENSIPUG00000020421	pum1	100	78.304	Ictalurus_punctatus
ENSPSIG00000014118	PUM1	100	97.811	ENSSTOG00000010757	PUM1	100	97.880	Ictidomys_tridecemlineatus
ENSPSIG00000014118	PUM1	100	97.391	ENSJJAG00000000530	Pum1	100	97.391	Jaculus_jaculus
ENSPSIG00000014118	PUM1	100	74.586	ENSKMAG00000003481	pum1	100	76.680	Kryptolebias_marmoratus
ENSPSIG00000014118	PUM1	100	74.295	ENSLBEG00000002527	pum1	100	76.642	Labrus_bergylta
ENSPSIG00000014118	PUM1	100	87.427	ENSLACG00000017188	PUM1	99	87.510	Latimeria_chalumnae
ENSPSIG00000014118	PUM1	100	88.481	ENSLOCG00000005210	pum1	99	88.564	Lepisosteus_oculatus
ENSPSIG00000014118	PUM1	100	97.393	ENSLAFG00000003178	PUM1	100	97.393	Loxodonta_africana
ENSPSIG00000014118	PUM1	100	97.569	ENSMFAG00000010291	PUM1	100	98.551	Macaca_fascicularis
ENSPSIG00000014118	PUM1	100	97.569	ENSMMUG00000013520	PUM1	100	98.130	Macaca_mulatta
ENSPSIG00000014118	PUM1	100	97.980	ENSMNEG00000034639	PUM1	100	98.130	Macaca_nemestrina
ENSPSIG00000014118	PUM1	100	97.980	ENSMLEG00000038743	PUM1	100	98.130	Mandrillus_leucophaeus
ENSPSIG00000014118	PUM1	100	75.083	ENSMAMG00000011606	pum1	100	77.261	Mastacembelus_armatus
ENSPSIG00000014118	PUM1	100	74.834	ENSMZEG00005005834	pum1	100	77.012	Maylandia_zebra
ENSPSIG00000014118	PUM1	100	98.738	ENSMGAG00000000724	PUM1	100	98.738	Meleagris_gallopavo
ENSPSIG00000014118	PUM1	100	97.309	ENSMAUG00000022090	Pum1	100	97.382	Mesocricetus_auratus
ENSPSIG00000014118	PUM1	99	95.798	ENSMICG00000012213	-	100	94.928	Microcebus_murinus
ENSPSIG00000014118	PUM1	100	97.813	ENSMICG00000007713	-	100	98.309	Microcebus_murinus
ENSPSIG00000014118	PUM1	100	97.140	ENSMOCG00000015463	Pum1	100	97.272	Microtus_ochrogaster
ENSPSIG00000014118	PUM1	90	88.506	ENSMMOG00000019817	pum1	100	92.010	Mola_mola
ENSPSIG00000014118	PUM1	100	98.151	ENSMODG00000017067	PUM1	100	98.151	Monodelphis_domestica
ENSPSIG00000014118	PUM1	90	88.736	ENSMALG00000016399	pum1	100	91.807	Monopterus_albus
ENSPSIG00000014118	PUM1	100	97.138	MGP_CAROLIEiJ_G0026549	Pum1	100	97.257	Mus_caroli
ENSPSIG00000014118	PUM1	100	97.222	ENSMUSG00000028580	Pum1	100	97.222	Mus_musculus
ENSPSIG00000014118	PUM1	100	97.054	MGP_PahariEiJ_G0028881	Pum1	100	97.132	Mus_pahari
ENSPSIG00000014118	PUM1	100	97.138	MGP_SPRETEiJ_G0027529	Pum1	100	97.138	Mus_spretus
ENSPSIG00000014118	PUM1	100	97.980	ENSMPUG00000015454	PUM1	100	97.980	Mustela_putorius_furo
ENSPSIG00000014118	PUM1	100	97.477	ENSMLUG00000006490	PUM1	100	97.477	Myotis_lucifugus
ENSPSIG00000014118	PUM1	100	97.559	ENSNGAG00000002378	Pum1	100	98.005	Nannospalax_galili
ENSPSIG00000014118	PUM1	85	81.908	ENSNBRG00000010689	pum1	100	84.302	Neolamprologus_brichardi
ENSPSIG00000014118	PUM1	100	96.633	ENSNLEG00000001151	PUM1	100	96.528	Nomascus_leucogenys
ENSPSIG00000014118	PUM1	76	100.000	ENSMEUG00000000976	-	75	97.297	Notamacropus_eugenii
ENSPSIG00000014118	PUM1	84	98.131	ENSOPRG00000001776	PUM1	73	98.131	Ochotona_princeps
ENSPSIG00000014118	PUM1	100	97.475	ENSODEG00000003465	PUM1	100	97.631	Octodon_degus
ENSPSIG00000014118	PUM1	100	75.410	ENSONIG00000002290	pum1	100	77.344	Oreochromis_niloticus
ENSPSIG00000014118	PUM1	81	77.222	ENSOANG00000004902	-	100	77.222	Ornithorhynchus_anatinus
ENSPSIG00000014118	PUM1	100	97.225	ENSOCUG00000008641	PUM1	99	97.225	Oryctolagus_cuniculus
ENSPSIG00000014118	PUM1	100	75.578	ENSORLG00000011482	pum1	100	76.923	Oryzias_latipes
ENSPSIG00000014118	PUM1	100	75.660	ENSORLG00020019461	pum1	100	76.923	Oryzias_latipes_hni
ENSPSIG00000014118	PUM1	100	75.660	ENSORLG00015011375	pum1	100	77.006	Oryzias_latipes_hsok
ENSPSIG00000014118	PUM1	100	94.878	ENSOGAG00000011063	PUM1	100	94.878	Otolemur_garnettii
ENSPSIG00000014118	PUM1	100	96.972	ENSOARG00000001899	PUM1	100	98.309	Ovis_aries
ENSPSIG00000014118	PUM1	100	97.980	ENSPPAG00000044003	PUM1	100	98.130	Pan_paniscus
ENSPSIG00000014118	PUM1	100	98.064	ENSPPRG00000001370	PUM1	100	98.254	Panthera_pardus
ENSPSIG00000014118	PUM1	100	97.896	ENSPTIG00000010798	PUM1	100	98.005	Panthera_tigris_altaica
ENSPSIG00000014118	PUM1	100	97.980	ENSPTRG00000000453	PUM1	100	98.130	Pan_troglodytes
ENSPSIG00000014118	PUM1	100	97.980	ENSPANG00000016338	PUM1	100	98.551	Papio_anubis
ENSPSIG00000014118	PUM1	95	93.961	ENSPKIG00000010578	pum1	100	83.300	Paramormyrops_kingsleyae
ENSPSIG00000014118	PUM1	85	80.123	ENSPMGG00000005836	pum1	100	82.742	Periophthalmus_magnuspinnatus
ENSPSIG00000014118	PUM1	100	97.309	ENSPEMG00000010009	Pum1	100	97.382	Peromyscus_maniculatus_bairdii
ENSPSIG00000014118	PUM1	100	98.235	ENSPCIG00000014151	PUM1	100	99.034	Phascolarctos_cinereus
ENSPSIG00000014118	PUM1	95	77.933	ENSPFOG00000007289	pum1	99	83.180	Poecilia_formosa
ENSPSIG00000014118	PUM1	98	77.433	ENSPLAG00000007256	pum1	100	79.067	Poecilia_latipinna
ENSPSIG00000014118	PUM1	90	77.880	ENSPMEG00000019543	pum1	99	79.025	Poecilia_mexicana
ENSPSIG00000014118	PUM1	100	75.083	ENSPREG00000005195	pum1	100	81.917	Poecilia_reticulata
ENSPSIG00000014118	PUM1	100	96.040	ENSPPYG00000001621	PUM1	100	96.040	Pongo_abelii
ENSPSIG00000014118	PUM1	85	98.148	ENSPCAG00000001979	PUM1	75	98.148	Procavia_capensis
ENSPSIG00000014118	PUM1	100	97.813	ENSPCOG00000004398	PUM1	100	98.309	Propithecus_coquereli
ENSPSIG00000014118	PUM1	100	95.791	ENSPVAG00000005207	PUM1	97	95.791	Pteropus_vampyrus
ENSPSIG00000014118	PUM1	100	74.917	ENSPNYG00000009518	pum1	100	82.169	Pundamilia_nyererei
ENSPSIG00000014118	PUM1	100	79.682	ENSPNAG00000026728	pum1	100	81.106	Pygocentrus_nattereri
ENSPSIG00000014118	PUM1	100	97.054	ENSRNOG00000011709	Pum1	100	97.054	Rattus_norvegicus
ENSPSIG00000014118	PUM1	100	97.980	ENSRBIG00000042521	PUM1	100	98.551	Rhinopithecus_bieti
ENSPSIG00000014118	PUM1	100	97.980	ENSRROG00000020156	PUM1	100	98.130	Rhinopithecus_roxellana
ENSPSIG00000014118	PUM1	100	97.813	ENSSBOG00000032037	PUM1	100	98.130	Saimiri_boliviensis_boliviensis
ENSPSIG00000014118	PUM1	100	98.067	ENSSHAG00000010918	PUM1	100	98.067	Sarcophilus_harrisii
ENSPSIG00000014118	PUM1	90	88.736	ENSSMAG00000010918	pum1	100	91.807	Scophthalmus_maximus
ENSPSIG00000014118	PUM1	100	75.083	ENSSDUG00000009021	pum1	100	77.427	Seriola_dumerili
ENSPSIG00000014118	PUM1	98	74.458	ENSSLDG00000009667	pum1	100	79.482	Seriola_lalandi_dorsalis
ENSPSIG00000014118	PUM1	97	96.976	ENSSARG00000003055	PUM1	91	97.309	Sorex_araneus
ENSPSIG00000014118	PUM1	100	98.401	ENSSPUG00000006267	PUM1	100	98.401	Sphenodon_punctatus
ENSPSIG00000014118	PUM1	90	91.807	ENSSPAG00000016636	pum1	100	91.807	Stegastes_partitus
ENSPSIG00000014118	PUM1	100	98.178	ENSSSCG00000003591	PUM1	100	98.792	Sus_scrofa
ENSPSIG00000014118	PUM1	100	74.979	ENSTRUG00000013121	pum1	100	83.931	Takifugu_rubripes
ENSPSIG00000014118	PUM1	100	75.229	ENSTNIG00000016983	pum1	99	77.261	Tetraodon_nigroviridis
ENSPSIG00000014118	PUM1	87	93.902	ENSTBEG00000013810	PUM1	89	93.902	Tupaia_belangeri
ENSPSIG00000014118	PUM1	92	98.175	ENSTTRG00000007436	PUM1	90	98.175	Tursiops_truncatus
ENSPSIG00000014118	PUM1	99	97.509	ENSUAMG00000018262	-	100	97.509	Ursus_americanus
ENSPSIG00000014118	PUM1	95	98.792	ENSUMAG00000009211	PUM1	100	98.792	Ursus_maritimus
ENSPSIG00000014118	PUM1	92	98.630	ENSVPAG00000005902	PUM1	92	98.630	Vicugna_pacos
ENSPSIG00000014118	PUM1	100	97.981	ENSVVUG00000014631	PUM1	100	98.792	Vulpes_vulpes
ENSPSIG00000014118	PUM1	100	88.161	ENSXETG00000012904	pum1	99	88.161	Xenopus_tropicalis
ENSPSIG00000014118	PUM1	100	74.338	ENSXMAG00000002945	pum1	100	78.964	Xiphophorus_maculatus