EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000014125 (Gene tree)
Gene ID: 102445521
Gene Symbol: SNRPB
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 5911 bases
Position: chrJH205206.1:232860-238770
Accession: 102445521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015882	LSM	PF01423.22	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000015957	SNRPB-201	732	XM_006111065	ENSPSIP00000015882	243 (aa)	XP_006111127	K7G6H1

Gene Model

Click here to download ENSPSIG00000014125's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014125	SNRPB	98	96.653	ENSG00000125835	SNRPB	99	96.653	Homo_sapiens
ENSPSIG00000014125	SNRPB	74	93.889	ENSAPOG00000019606	snrpb	56	96.407	Acanthochromis_polyacanthus
ENSPSIG00000014125	SNRPB	100	96.296	ENSAMEG00000011353	SNRPB	100	96.296	Ailuropoda_melanoleuca
ENSPSIG00000014125	SNRPB	72	93.714	ENSACIG00000014480	snrpb	71	96.296	Amphilophus_citrinellus
ENSPSIG00000014125	SNRPB	74	93.889	ENSAOCG00000006876	snrpb	69	96.407	Amphiprion_ocellaris
ENSPSIG00000014125	SNRPB	74	93.889	ENSAPEG00000021585	snrpb	71	96.407	Amphiprion_percula
ENSPSIG00000014125	SNRPB	74	93.333	ENSATEG00000009836	snrpb	69	95.808	Anabas_testudineus
ENSPSIG00000014125	SNRPB	95	98.276	ENSACAG00000002053	SNRPB	100	98.276	Anolis_carolinensis
ENSPSIG00000014125	SNRPB	95	89.130	ENSANAG00000036271	-	76	89.894	Aotus_nancymaae
ENSPSIG00000014125	SNRPB	98	96.653	ENSANAG00000024443	-	99	96.653	Aotus_nancymaae
ENSPSIG00000014125	SNRPB	74	93.889	ENSACLG00000014707	snrpb	69	96.407	Astatotilapia_calliptera
ENSPSIG00000014125	SNRPB	75	93.956	ENSAMXG00000029434	snrpb	70	95.808	Astyanax_mexicanus
ENSPSIG00000014125	SNRPB	94	96.053	ENSBTAG00000001038	SNRPB	99	96.053	Bos_taurus
ENSPSIG00000014125	SNRPB	94	96.491	ENSCJAG00000020971	-	99	96.491	Callithrix_jacchus
ENSPSIG00000014125	SNRPB	88	88.263	ENSCJAG00000023097	-	78	88.830	Callithrix_jacchus
ENSPSIG00000014125	SNRPB	78	84.817	ENSCAFG00000031109	-	79	81.675	Canis_familiaris
ENSPSIG00000014125	SNRPB	94	96.491	ENSCAFG00000006693	-	99	96.491	Canis_familiaris
ENSPSIG00000014125	SNRPB	98	96.653	ENSCAFG00020016981	-	99	96.653	Canis_lupus_dingo
ENSPSIG00000014125	SNRPB	94	96.053	ENSCHIG00000025449	-	99	96.053	Capra_hircus
ENSPSIG00000014125	SNRPB	95	96.087	ENSTSYG00000014498	-	99	96.491	Carlito_syrichta
ENSPSIG00000014125	SNRPB	95	72.727	ENSTSYG00000032303	-	55	76.510	Carlito_syrichta
ENSPSIG00000014125	SNRPB	99	96.266	ENSCAPG00000012669	SNRPB	100	96.266	Cavia_aperea
ENSPSIG00000014125	SNRPB	94	96.491	ENSCPOG00000039408	SNRPB	99	96.491	Cavia_porcellus
ENSPSIG00000014125	SNRPB	52	84.252	ENSCCAG00000035140	-	89	84.314	Cebus_capucinus
ENSPSIG00000014125	SNRPB	98	96.653	ENSCCAG00000026002	SNRPB	99	96.653	Cebus_capucinus
ENSPSIG00000014125	SNRPB	94	96.491	ENSCATG00000030230	SNRPB	99	96.491	Cercocebus_atys
ENSPSIG00000014125	SNRPB	98	95.397	ENSCLAG00000012442	SNRPB	99	95.397	Chinchilla_lanigera
ENSPSIG00000014125	SNRPB	94	96.491	ENSCSAG00000010840	SNRPB	99	96.491	Chlorocebus_sabaeus
ENSPSIG00000014125	SNRPB	98	100.000	ENSCPBG00000026801	SNRPB	99	100.000	Chrysemys_picta_bellii
ENSPSIG00000014125	SNRPB	98	96.653	ENSCANG00000019461	SNRPB	99	96.653	Colobus_angolensis_palliatus
ENSPSIG00000014125	SNRPB	94	96.491	ENSCGRG00001023046	Snrpb	99	96.491	Cricetulus_griseus_chok1gshd
ENSPSIG00000014125	SNRPB	91	96.380	ENSCGRG00000010423	Snrpb	98	96.380	Cricetulus_griseus_crigri
ENSPSIG00000014125	SNRPB	75	93.407	ENSCSEG00000020328	snrpb	69	96.407	Cynoglossus_semilaevis
ENSPSIG00000014125	SNRPB	69	94.611	ENSDARG00000011125	snrpb	69	96.407	Danio_rerio
ENSPSIG00000014125	SNRPB	98	96.653	ENSDNOG00000015545	-	99	96.653	Dasypus_novemcinctus
ENSPSIG00000014125	SNRPB	91	91.892	ENSDNOG00000007896	-	92	91.071	Dasypus_novemcinctus
ENSPSIG00000014125	SNRPB	95	96.087	ENSDORG00000029558	Snrpb	100	96.087	Dipodomys_ordii
ENSPSIG00000014125	SNRPB	61	70.270	FBgn0262601	SmB	73	70.270	Drosophila_melanogaster
ENSPSIG00000014125	SNRPB	75	76.923	ENSETEG00000006830	SNRPB	73	76.048	Echinops_telfairi
ENSPSIG00000014125	SNRPB	74	81.081	ENSEBUG00000007467	SNRPB	62	89.865	Eptatretus_burgeri
ENSPSIG00000014125	SNRPB	94	96.053	ENSEASG00005012991	SNRPB	99	96.053	Equus_asinus_asinus
ENSPSIG00000014125	SNRPB	94	96.491	ENSECAG00000011944	SNRPB	99	96.491	Equus_caballus
ENSPSIG00000014125	SNRPB	98	88.142	ENSEEUG00000015568	SNRPB	77	96.364	Erinaceus_europaeus
ENSPSIG00000014125	SNRPB	98	96.234	ENSELUG00000014564	snrpb	99	96.234	Esox_lucius
ENSPSIG00000014125	SNRPB	94	96.491	ENSFCAG00000034090	-	99	96.491	Felis_catus
ENSPSIG00000014125	SNRPB	95	99.569	ENSFALG00000004866	SNRPB	100	99.569	Ficedula_albicollis
ENSPSIG00000014125	SNRPB	99	96.250	ENSFDAG00000009937	SNRPB	99	96.491	Fukomys_damarensis
ENSPSIG00000014125	SNRPB	98	99.582	ENSGALG00000035421	SNRPN	99	99.582	Gallus_gallus
ENSPSIG00000014125	SNRPB	72	93.714	ENSGAFG00000019558	snrpb	74	95.294	Gambusia_affinis
ENSPSIG00000014125	SNRPB	75	92.857	ENSGACG00000003262	snrpb	69	96.407	Gasterosteus_aculeatus
ENSPSIG00000014125	SNRPB	98	100.000	ENSGAGG00000001308	SNRPB	99	100.000	Gopherus_agassizii
ENSPSIG00000014125	SNRPB	94	96.491	ENSGGOG00000016138	SNRPB	99	96.491	Gorilla_gorilla
ENSPSIG00000014125	SNRPB	74	93.889	ENSHBUG00000008369	snrpb	69	96.407	Haplochromis_burtoni
ENSPSIG00000014125	SNRPB	61	87.162	ENSHGLG00000016505	-	71	87.162	Heterocephalus_glaber_female
ENSPSIG00000014125	SNRPB	94	96.491	ENSHGLG00000016241	-	99	96.491	Heterocephalus_glaber_female
ENSPSIG00000014125	SNRPB	61	87.162	ENSHGLG00100004178	-	71	87.162	Heterocephalus_glaber_male
ENSPSIG00000014125	SNRPB	98	96.653	ENSHGLG00100012877	-	99	96.653	Heterocephalus_glaber_male
ENSPSIG00000014125	SNRPB	75	93.407	ENSHCOG00000014888	snrpb	69	96.407	Hippocampus_comes
ENSPSIG00000014125	SNRPB	98	97.071	ENSIPUG00000024569	SNRPB	99	97.071	Ictalurus_punctatus
ENSPSIG00000014125	SNRPB	89	77.315	ENSSTOG00000027821	-	62	95.588	Ictidomys_tridecemlineatus
ENSPSIG00000014125	SNRPB	91	94.545	ENSSTOG00000033664	-	92	94.545	Ictidomys_tridecemlineatus
ENSPSIG00000014125	SNRPB	94	96.491	ENSJJAG00000024170	Snrpb	99	96.491	Jaculus_jaculus
ENSPSIG00000014125	SNRPB	71	95.349	ENSKMAG00000014494	snrpb	68	97.006	Kryptolebias_marmoratus
ENSPSIG00000014125	SNRPB	75	93.407	ENSLBEG00000005678	snrpb	69	96.407	Labrus_bergylta
ENSPSIG00000014125	SNRPB	91	95.455	ENSLACG00000011459	SNRPB	92	95.455	Latimeria_chalumnae
ENSPSIG00000014125	SNRPB	98	97.490	ENSLOCG00000002687	snrpb	99	97.490	Lepisosteus_oculatus
ENSPSIG00000014125	SNRPB	91	92.308	ENSLAFG00000017588	SNRPB	96	92.308	Loxodonta_africana
ENSPSIG00000014125	SNRPB	94	96.491	ENSMFAG00000038756	SNRPB	99	96.491	Macaca_fascicularis
ENSPSIG00000014125	SNRPB	94	96.491	ENSMMUG00000010050	SNRPB	99	96.491	Macaca_mulatta
ENSPSIG00000014125	SNRPB	94	96.491	ENSMNEG00000027954	SNRPB	99	96.491	Macaca_nemestrina
ENSPSIG00000014125	SNRPB	98	96.653	ENSMLEG00000022346	SNRPB	99	96.653	Mandrillus_leucophaeus
ENSPSIG00000014125	SNRPB	75	93.407	ENSMAMG00000009294	snrpb	68	95.858	Mastacembelus_armatus
ENSPSIG00000014125	SNRPB	74	93.889	ENSMZEG00005011856	snrpb	69	96.407	Maylandia_zebra
ENSPSIG00000014125	SNRPB	94	96.053	ENSMICG00000016519	SNRPB	99	96.053	Microcebus_murinus
ENSPSIG00000014125	SNRPB	92	82.143	ENSMICG00000015983	-	86	86.702	Microcebus_murinus
ENSPSIG00000014125	SNRPB	94	96.053	ENSMOCG00000002892	-	99	96.053	Microtus_ochrogaster
ENSPSIG00000014125	SNRPB	72	75.862	ENSMOCG00000021362	-	72	70.690	Microtus_ochrogaster
ENSPSIG00000014125	SNRPB	77	92.473	ENSMMOG00000013226	snrpb	73	95.322	Mola_mola
ENSPSIG00000014125	SNRPB	74	93.333	ENSMALG00000020839	snrpb	56	95.808	Monopterus_albus
ENSPSIG00000014125	SNRPB	94	96.491	MGP_CAROLIEiJ_G0024293	Snrpb	99	96.491	Mus_caroli
ENSPSIG00000014125	SNRPB	94	96.491	ENSMUSG00000027404	Snrpb	99	96.491	Mus_musculus
ENSPSIG00000014125	SNRPB	94	96.491	MGP_PahariEiJ_G0025738	Snrpb	99	96.491	Mus_pahari
ENSPSIG00000014125	SNRPB	94	96.491	MGP_SPRETEiJ_G0025213	Snrpb	99	96.491	Mus_spretus
ENSPSIG00000014125	SNRPB	94	96.491	ENSMPUG00000009283	SNRPB	99	96.491	Mustela_putorius_furo
ENSPSIG00000014125	SNRPB	91	93.182	ENSMLUG00000016951	SNRPB	91	93.182	Myotis_lucifugus
ENSPSIG00000014125	SNRPB	94	96.491	ENSNGAG00000012051	Snrpb	99	96.491	Nannospalax_galili
ENSPSIG00000014125	SNRPB	73	92.655	ENSNBRG00000006353	snrpb	62	95.122	Neolamprologus_brichardi
ENSPSIG00000014125	SNRPB	98	96.653	ENSNLEG00000029067	SNRPB	99	96.653	Nomascus_leucogenys
ENSPSIG00000014125	SNRPB	93	96.444	ENSMEUG00000015625	SNRPB	100	96.444	Notamacropus_eugenii
ENSPSIG00000014125	SNRPB	77	92.021	ENSODEG00000016060	-	79	93.085	Octodon_degus
ENSPSIG00000014125	SNRPB	98	93.305	ENSODEG00000004305	-	99	96.491	Octodon_degus
ENSPSIG00000014125	SNRPB	74	93.889	ENSONIG00000000248	snrpb	69	96.407	Oreochromis_niloticus
ENSPSIG00000014125	SNRPB	88	91.121	ENSOCUG00000021456	-	78	92.553	Oryctolagus_cuniculus
ENSPSIG00000014125	SNRPB	73	89.888	ENSOCUG00000022423	-	86	93.413	Oryctolagus_cuniculus
ENSPSIG00000014125	SNRPB	98	96.234	ENSOCUG00000014042	-	99	96.234	Oryctolagus_cuniculus
ENSPSIG00000014125	SNRPB	88	68.837	ENSOCUG00000026813	-	64	67.333	Oryctolagus_cuniculus
ENSPSIG00000014125	SNRPB	74	93.370	ENSORLG00000021862	snrpb	69	96.407	Oryzias_latipes
ENSPSIG00000014125	SNRPB	98	96.653	ENSOGAG00000016149	SNRPB	99	96.653	Otolemur_garnettii
ENSPSIG00000014125	SNRPB	94	96.053	ENSOARG00000006740	SNRPB	99	96.053	Ovis_aries
ENSPSIG00000014125	SNRPB	94	96.491	ENSPPAG00000036314	SNRPB	99	96.491	Pan_paniscus
ENSPSIG00000014125	SNRPB	98	96.653	ENSPPRG00000003233	-	99	96.653	Panthera_pardus
ENSPSIG00000014125	SNRPB	98	96.653	ENSPTIG00000007468	SNRPB	99	96.653	Panthera_tigris_altaica
ENSPSIG00000014125	SNRPB	94	96.491	ENSPTRG00000013176	SNRPB	99	96.491	Pan_troglodytes
ENSPSIG00000014125	SNRPB	98	96.653	ENSPANG00000020362	SNRPB	99	96.653	Papio_anubis
ENSPSIG00000014125	SNRPB	98	96.234	ENSPKIG00000002865	snrpb	99	96.234	Paramormyrops_kingsleyae
ENSPSIG00000014125	SNRPB	73	91.573	ENSPMGG00000016349	snrpb	69	93.865	Periophthalmus_magnuspinnatus
ENSPSIG00000014125	SNRPB	94	96.491	ENSPEMG00000007948	Snrpb	99	96.491	Peromyscus_maniculatus_bairdii
ENSPSIG00000014125	SNRPB	91	95.495	ENSPCIG00000004694	SNRPB	92	95.495	Phascolarctos_cinereus
ENSPSIG00000014125	SNRPB	94	96.491	ENSPPYG00000010841	SNRPB	99	96.491	Pongo_abelii
ENSPSIG00000014125	SNRPB	94	96.491	ENSPCOG00000013686	SNRPB	99	96.491	Propithecus_coquereli
ENSPSIG00000014125	SNRPB	91	95.455	ENSPVAG00000017013	SNRPB	77	95.455	Pteropus_vampyrus
ENSPSIG00000014125	SNRPB	74	93.889	ENSPNYG00000014788	snrpb	69	96.407	Pundamilia_nyererei
ENSPSIG00000014125	SNRPB	75	93.956	ENSPNAG00000016126	snrpb	69	96.407	Pygocentrus_nattereri
ENSPSIG00000014125	SNRPB	94	96.491	ENSRNOG00000006961	Snrpb	99	96.491	Rattus_norvegicus
ENSPSIG00000014125	SNRPB	98	96.234	ENSRBIG00000040505	SNRPB	99	96.234	Rhinopithecus_bieti
ENSPSIG00000014125	SNRPB	98	96.653	ENSRROG00000036094	SNRPB	99	96.653	Rhinopithecus_roxellana
ENSPSIG00000014125	SNRPB	98	96.653	ENSSBOG00000027310	SNRPB	99	96.653	Saimiri_boliviensis_boliviensis
ENSPSIG00000014125	SNRPB	98	97.490	ENSSHAG00000010394	SNRPB	99	97.490	Sarcophilus_harrisii
ENSPSIG00000014125	SNRPB	69	94.012	ENSSFOG00015002870	snrpb	70	95.210	Scleropages_formosus
ENSPSIG00000014125	SNRPB	98	95.781	ENSSMAG00000006766	snrpb	98	95.781	Scophthalmus_maximus
ENSPSIG00000014125	SNRPB	74	93.889	ENSSDUG00000018539	snrpb	69	96.407	Seriola_dumerili
ENSPSIG00000014125	SNRPB	74	93.889	ENSSLDG00000022391	snrpb	69	96.407	Seriola_lalandi_dorsalis
ENSPSIG00000014125	SNRPB	91	84.545	ENSSARG00000003084	SNRPB	94	84.545	Sorex_araneus
ENSPSIG00000014125	SNRPB	98	100.000	ENSSPUG00000015659	SNRPB	100	100.000	Sphenodon_punctatus
ENSPSIG00000014125	SNRPB	74	93.889	ENSSPAG00000021992	snrpb	69	96.407	Stegastes_partitus
ENSPSIG00000014125	SNRPB	94	77.193	ENSSSCG00000011966	-	76	71.978	Sus_scrofa
ENSPSIG00000014125	SNRPB	95	95.259	ENSSSCG00000040857	-	99	96.053	Sus_scrofa
ENSPSIG00000014125	SNRPB	73	81.921	ENSTGUG00000005684	SNRPB	59	99.286	Taeniopygia_guttata
ENSPSIG00000014125	SNRPB	94	95.614	ENSTRUG00000023094	snrpb	98	95.614	Takifugu_rubripes
ENSPSIG00000014125	SNRPB	98	95.781	ENSTNIG00000002991	snrpb	98	95.781	Tetraodon_nigroviridis
ENSPSIG00000014125	SNRPB	72	96.552	ENSUAMG00000005984	-	83	96.552	Ursus_americanus
ENSPSIG00000014125	SNRPB	56	95.620	ENSUMAG00000002123	-	64	94.245	Ursus_maritimus
ENSPSIG00000014125	SNRPB	98	96.234	ENSVVUG00000025654	-	99	96.234	Vulpes_vulpes
ENSPSIG00000014125	SNRPB	98	73.640	ENSVVUG00000010086	-	84	78.462	Vulpes_vulpes
ENSPSIG00000014125	SNRPB	98	95.816	ENSXETG00000027266	snrpb	99	95.816	Xenopus_tropicalis
ENSPSIG00000014125	SNRPB	70	80.702	ENSXMAG00000028767	snrpb	58	97.778	Xiphophorus_maculatus