EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000014242 (Gene tree)
Gene ID: 102446131
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 57560 bases
Position: chrJH209475.1:4883294-4940853
Accession: 102446131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000015954	RRM_1	PF00076.22	4.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000016029	SCAF4-201	3243	XM_006126061	ENSPSIP00000015954	1080 (aa)	XP_006126123	K7G6P3

Gene Model

Click here to download ENSPSIG00000014242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014242's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014242	SCAF4	57	84.520	ENSG00000156304	SCAF4	99	77.145	Homo_sapiens
ENSPSIG00000014242	SCAF4	79	54.810	ENSAPOG00000002946	scaf4a	50	40.945	Acanthochromis_polyacanthus
ENSPSIG00000014242	SCAF4	83	54.017	ENSAOCG00000000615	scaf4a	52	39.704	Amphiprion_ocellaris
ENSPSIG00000014242	SCAF4	50	56.846	ENSATEG00000011758	scaf4b	59	71.250	Anabas_testudineus
ENSPSIG00000014242	SCAF4	97	87.442	ENSAPLG00000002509	SCAF4	99	88.366	Anas_platyrhynchos
ENSPSIG00000014242	SCAF4	97	68.868	ENSACAG00000002569	SCAF4	89	73.721	Anolis_carolinensis
ENSPSIG00000014242	SCAF4	57	84.520	ENSANAG00000037494	SCAF4	99	76.728	Aotus_nancymaae
ENSPSIG00000014242	SCAF4	90	52.437	ENSAMXG00000008585	scaf4a	96	49.504	Astyanax_mexicanus
ENSPSIG00000014242	SCAF4	57	84.056	ENSBTAG00000018855	SCAF4	100	76.512	Bos_taurus
ENSPSIG00000014242	SCAF4	57	84.651	ENSCJAG00000008993	SCAF4	99	81.045	Callithrix_jacchus
ENSPSIG00000014242	SCAF4	57	84.472	ENSCAFG00000008863	SCAF4	100	77.827	Canis_familiaris
ENSPSIG00000014242	SCAF4	57	81.191	ENSCAFG00020026019	SCAF4	100	76.663	Canis_lupus_dingo
ENSPSIG00000014242	SCAF4	57	83.538	ENSCHIG00000008385	SCAF4	99	76.491	Capra_hircus
ENSPSIG00000014242	SCAF4	57	85.782	ENSTSYG00000011344	SCAF4	99	77.214	Carlito_syrichta
ENSPSIG00000014242	SCAF4	86	82.695	ENSCPOG00000012443	SCAF4	99	75.397	Cavia_porcellus
ENSPSIG00000014242	SCAF4	57	84.496	ENSCCAG00000033727	SCAF4	99	76.930	Cebus_capucinus
ENSPSIG00000014242	SCAF4	57	86.378	ENSCATG00000030379	SCAF4	99	77.649	Cercocebus_atys
ENSPSIG00000014242	SCAF4	89	82.569	ENSCLAG00000006298	SCAF4	100	74.394	Chinchilla_lanigera
ENSPSIG00000014242	SCAF4	57	84.080	ENSCSAG00000009438	SCAF4	99	76.789	Chlorocebus_sabaeus
ENSPSIG00000014242	SCAF4	57	84.211	ENSCANG00000029847	SCAF4	99	76.950	Colobus_angolensis_palliatus
ENSPSIG00000014242	SCAF4	58	73.677	ENSCGRG00001020821	Scaf4	99	75.603	Cricetulus_griseus_chok1gshd
ENSPSIG00000014242	SCAF4	57	73.427	ENSCGRG00000014360	Scaf4	100	69.186	Cricetulus_griseus_crigri
ENSPSIG00000014242	SCAF4	83	51.141	ENSCSEG00000019549	scaf4a	53	40.889	Cynoglossus_semilaevis
ENSPSIG00000014242	SCAF4	97	72.511	ENSDNOG00000019014	SCAF4	94	73.568	Dasypus_novemcinctus
ENSPSIG00000014242	SCAF4	93	64.895	ENSETEG00000000583	SCAF4	99	66.361	Echinops_telfairi
ENSPSIG00000014242	SCAF4	57	84.317	ENSEASG00005007756	SCAF4	99	77.377	Equus_asinus_asinus
ENSPSIG00000014242	SCAF4	57	84.317	ENSECAG00000014248	SCAF4	99	77.309	Equus_caballus
ENSPSIG00000014242	SCAF4	54	73.913	ENSELUG00000009909	scaf4a	65	74.317	Esox_lucius
ENSPSIG00000014242	SCAF4	57	84.000	ENSFCAG00000002228	SCAF4	99	77.329	Felis_catus
ENSPSIG00000014242	SCAF4	61	78.903	ENSFDAG00000017780	SCAF4	100	74.052	Fukomys_damarensis
ENSPSIG00000014242	SCAF4	99	87.307	ENSGALG00000033965	SCAF4	99	89.279	Gallus_gallus
ENSPSIG00000014242	SCAF4	90	79.391	ENSGGOG00000015557	SCAF4	98	85.185	Gorilla_gorilla
ENSPSIG00000014242	SCAF4	57	81.942	ENSHGLG00000010582	SCAF4	99	75.436	Heterocephalus_glaber_female
ENSPSIG00000014242	SCAF4	57	81.832	ENSHGLG00100009441	SCAF4	100	75.350	Heterocephalus_glaber_male
ENSPSIG00000014242	SCAF4	57	73.798	ENSSTOG00000004450	SCAF4	100	72.511	Ictidomys_tridecemlineatus
ENSPSIG00000014242	SCAF4	97	71.982	ENSJJAG00000019447	Scaf4	99	74.009	Jaculus_jaculus
ENSPSIG00000014242	SCAF4	81	53.276	ENSLBEG00000014675	scaf4a	55	41.123	Labrus_bergylta
ENSPSIG00000014242	SCAF4	95	61.883	ENSLACG00000013913	SCAF4	100	64.808	Latimeria_chalumnae
ENSPSIG00000014242	SCAF4	93	60.094	ENSLOCG00000009162	scaf4a	96	59.352	Lepisosteus_oculatus
ENSPSIG00000014242	SCAF4	58	92.032	ENSLAFG00000010710	SCAF4	99	78.990	Loxodonta_africana
ENSPSIG00000014242	SCAF4	57	86.378	ENSMFAG00000037668	SCAF4	99	77.374	Macaca_fascicularis
ENSPSIG00000014242	SCAF4	58	84.049	ENSMMUG00000001712	SCAF4	100	76.384	Macaca_mulatta
ENSPSIG00000014242	SCAF4	73	84.211	ENSMNEG00000032966	SCAF4	99	77.305	Macaca_nemestrina
ENSPSIG00000014242	SCAF4	57	84.211	ENSMLEG00000039674	SCAF4	100	76.655	Mandrillus_leucophaeus
ENSPSIG00000014242	SCAF4	56	50.148	ENSMAMG00000013223	scaf4a	77	41.394	Mastacembelus_armatus
ENSPSIG00000014242	SCAF4	97	88.355	ENSMGAG00000014515	SCAF4	99	89.279	Meleagris_gallopavo
ENSPSIG00000014242	SCAF4	97	74.211	ENSMAUG00000013307	Scaf4	100	75.353	Mesocricetus_auratus
ENSPSIG00000014242	SCAF4	57	86.603	ENSMICG00000005256	SCAF4	99	78.304	Microcebus_murinus
ENSPSIG00000014242	SCAF4	96	76.796	ENSMOCG00000012087	Scaf4	99	76.064	Microtus_ochrogaster
ENSPSIG00000014242	SCAF4	97	79.374	ENSMODG00000021040	SCAF4	99	80.369	Monodelphis_domestica
ENSPSIG00000014242	SCAF4	57	60.959	ENSMALG00000013825	scaf4a	51	61.348	Monopterus_albus
ENSPSIG00000014242	SCAF4	56	87.365	MGP_CAROLIEiJ_G0020944	Scaf4	94	75.597	Mus_caroli
ENSPSIG00000014242	SCAF4	56	87.365	ENSMUSG00000022983	Scaf4	94	75.597	Mus_musculus
ENSPSIG00000014242	SCAF4	55	89.394	MGP_PahariEiJ_G0016649	Scaf4	94	76.393	Mus_pahari
ENSPSIG00000014242	SCAF4	57	83.959	MGP_SPRETEiJ_G0021850	Scaf4	99	75.597	Mus_spretus
ENSPSIG00000014242	SCAF4	57	83.771	ENSMPUG00000001078	SCAF4	99	76.789	Mustela_putorius_furo
ENSPSIG00000014242	SCAF4	57	75.036	ENSMLUG00000011472	SCAF4	99	69.468	Myotis_lucifugus
ENSPSIG00000014242	SCAF4	57	83.153	ENSNGAG00000005214	Scaf4	99	76.182	Nannospalax_galili
ENSPSIG00000014242	SCAF4	57	84.211	ENSNLEG00000003569	SCAF4	99	77.145	Nomascus_leucogenys
ENSPSIG00000014242	SCAF4	82	74.691	ENSOPRG00000007016	SCAF4	78	76.179	Ochotona_princeps
ENSPSIG00000014242	SCAF4	57	86.909	ENSODEG00000002718	SCAF4	99	74.249	Octodon_degus
ENSPSIG00000014242	SCAF4	83	54.336	ENSONIG00000004687	scaf4a	53	45.378	Oreochromis_niloticus
ENSPSIG00000014242	SCAF4	57	83.205	ENSOCUG00000008336	SCAF4	99	73.826	Oryctolagus_cuniculus
ENSPSIG00000014242	SCAF4	57	88.411	ENSOGAG00000014653	SCAF4	93	74.372	Otolemur_garnettii
ENSPSIG00000014242	SCAF4	57	83.077	ENSOARG00000013894	SCAF4	98	76.311	Ovis_aries
ENSPSIG00000014242	SCAF4	57	84.520	ENSPPAG00000028535	SCAF4	99	77.145	Pan_paniscus
ENSPSIG00000014242	SCAF4	57	84.259	ENSPPRG00000000635	SCAF4	100	77.465	Panthera_pardus
ENSPSIG00000014242	SCAF4	57	85.331	ENSPTIG00000021578	SCAF4	99	76.944	Panthera_tigris_altaica
ENSPSIG00000014242	SCAF4	57	84.520	ENSPTRG00000013848	SCAF4	99	77.145	Pan_troglodytes
ENSPSIG00000014242	SCAF4	57	84.211	ENSPANG00000017332	SCAF4	99	76.889	Papio_anubis
ENSPSIG00000014242	SCAF4	64	63.961	ENSPKIG00000022408	scaf4a	98	63.237	Paramormyrops_kingsleyae
ENSPSIG00000014242	SCAF4	58	88.942	ENSPCIG00000028183	SCAF4	91	78.631	Phascolarctos_cinereus
ENSPSIG00000014242	SCAF4	57	84.365	ENSPPYG00000011355	SCAF4	100	76.910	Pongo_abelii
ENSPSIG00000014242	SCAF4	89	88.519	ENSPCAG00000009998	SCAF4	99	71.111	Procavia_capensis
ENSPSIG00000014242	SCAF4	97	75.201	ENSPCOG00000018710	SCAF4	99	78.094	Propithecus_coquereli
ENSPSIG00000014242	SCAF4	57	83.851	ENSPVAG00000005220	SCAF4	99	77.208	Pteropus_vampyrus
ENSPSIG00000014242	SCAF4	76	57.801	ENSPNAG00000016892	scaf4a	96	50.267	Pygocentrus_nattereri
ENSPSIG00000014242	SCAF4	61	89.916	ENSRNOG00000002104	Scaf4	74	89.540	Rattus_norvegicus
ENSPSIG00000014242	SCAF4	57	84.135	ENSRBIG00000040007	SCAF4	61	72.617	Rhinopithecus_bieti
ENSPSIG00000014242	SCAF4	57	84.675	ENSRROG00000029488	SCAF4	99	77.193	Rhinopithecus_roxellana
ENSPSIG00000014242	SCAF4	58	88.782	ENSSHAG00000001581	SCAF4	99	80.148	Sarcophilus_harrisii
ENSPSIG00000014242	SCAF4	84	48.695	ENSSFOG00015006338	scaf4a	98	49.950	Scleropages_formosus
ENSPSIG00000014242	SCAF4	72	53.651	ENSSMAG00000003738	scaf4b	57	70.701	Scophthalmus_maximus
ENSPSIG00000014242	SCAF4	90	47.541	ENSSMAG00000017901	scaf4a	58	38.174	Scophthalmus_maximus
ENSPSIG00000014242	SCAF4	50	56.356	ENSSDUG00000012380	scaf4b	57	69.427	Seriola_dumerili
ENSPSIG00000014242	SCAF4	82	54.093	ENSSDUG00000012918	scaf4a	51	42.258	Seriola_dumerili
ENSPSIG00000014242	SCAF4	82	54.309	ENSSLDG00000021671	scaf4a	51	42.512	Seriola_lalandi_dorsalis
ENSPSIG00000014242	SCAF4	50	56.356	ENSSLDG00000023152	-	57	69.427	Seriola_lalandi_dorsalis
ENSPSIG00000014242	SCAF4	57	83.028	ENSSSCG00000021023	SCAF4	99	73.374	Sus_scrofa
ENSPSIG00000014242	SCAF4	75	85.714	ENSTGUG00000013464	SCAF4	95	84.533	Taeniopygia_guttata
ENSPSIG00000014242	SCAF4	51	56.679	ENSTRUG00000009536	-	63	58.209	Takifugu_rubripes
ENSPSIG00000014242	SCAF4	57	84.448	ENSTTRG00000010963	SCAF4	100	76.876	Tursiops_truncatus
ENSPSIG00000014242	SCAF4	57	84.137	ENSUAMG00000008860	SCAF4	99	76.216	Ursus_americanus
ENSPSIG00000014242	SCAF4	57	85.507	ENSUMAG00000016962	SCAF4	100	79.780	Ursus_maritimus
ENSPSIG00000014242	SCAF4	57	84.639	ENSVVUG00000002953	SCAF4	100	77.975	Vulpes_vulpes