EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000014268 (Gene tree)
Gene ID: 102456538
Gene Symbol: RPUSD4
Alias: -
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 5712 bases
Position: chrJH208551.1:2272748-2278459
Accession: 102456538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000016015	PseudoU_synth_2	PF00849.22	1.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000016091	RPUSD4-201	951	XM_006122327	ENSPSIP00000016015	315 (aa)	-	K7G6V4

Gene Model

Click here to download ENSPSIG00000014268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000014268	RPUSD4	68	30.047	ENSPSIG00000012680	RPUSD2	52	30.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014268	RPUSD4	95	67.114	ENSG00000165526	RPUSD4	79	67.114	Homo_sapiens
ENSPSIG00000014268	RPUSD4	93	53.199	ENSAPOG00000011024	rpusd4	74	53.199	Acanthochromis_polyacanthus
ENSPSIG00000014268	RPUSD4	95	66.333	ENSAMEG00000000127	-	79	66.333	Ailuropoda_melanoleuca
ENSPSIG00000014268	RPUSD4	73	64.211	ENSAMEG00000005953	-	93	64.211	Ailuropoda_melanoleuca
ENSPSIG00000014268	RPUSD4	93	52.189	ENSACIG00000003533	rpusd4	87	52.189	Amphilophus_citrinellus
ENSPSIG00000014268	RPUSD4	96	53.289	ENSAOCG00000015409	rpusd4	75	53.289	Amphiprion_ocellaris
ENSPSIG00000014268	RPUSD4	96	53.618	ENSAPEG00000018935	rpusd4	75	53.618	Amphiprion_percula
ENSPSIG00000014268	RPUSD4	93	54.545	ENSATEG00000008059	rpusd4	73	54.545	Anabas_testudineus
ENSPSIG00000014268	RPUSD4	89	73.118	ENSAPLG00000013250	RPUSD4	99	71.525	Anas_platyrhynchos
ENSPSIG00000014268	RPUSD4	96	73.355	ENSACAG00000000189	RPUSD4	83	73.355	Anolis_carolinensis
ENSPSIG00000014268	RPUSD4	96	66.997	ENSANAG00000024050	RPUSD4	81	66.997	Aotus_nancymaae
ENSPSIG00000014268	RPUSD4	93	54.545	ENSACLG00000020996	rpusd4	76	54.545	Astatotilapia_calliptera
ENSPSIG00000014268	RPUSD4	96	55.776	ENSAMXG00000031479	rpusd4	85	55.776	Astyanax_mexicanus
ENSPSIG00000014268	RPUSD4	95	66.000	ENSBTAG00000020900	RPUSD4	79	66.000	Bos_taurus
ENSPSIG00000014268	RPUSD4	96	67.987	ENSCJAG00000042850	RPUSD4	76	67.987	Callithrix_jacchus
ENSPSIG00000014268	RPUSD4	95	66.333	ENSCAFG00000010488	RPUSD4	79	66.333	Canis_familiaris
ENSPSIG00000014268	RPUSD4	95	66.333	ENSCAFG00020010621	RPUSD4	79	66.333	Canis_lupus_dingo
ENSPSIG00000014268	RPUSD4	95	65.000	ENSCHIG00000009975	RPUSD4	79	65.000	Capra_hircus
ENSPSIG00000014268	RPUSD4	95	68.667	ENSTSYG00000008456	RPUSD4	79	68.667	Carlito_syrichta
ENSPSIG00000014268	RPUSD4	78	61.224	ENSCAPG00000006040	RPUSD4	94	61.224	Cavia_aperea
ENSPSIG00000014268	RPUSD4	95	66.667	ENSCPOG00000014971	RPUSD4	79	66.667	Cavia_porcellus
ENSPSIG00000014268	RPUSD4	96	66.997	ENSCCAG00000027838	RPUSD4	81	66.997	Cebus_capucinus
ENSPSIG00000014268	RPUSD4	95	66.779	ENSCATG00000041570	RPUSD4	79	66.779	Cercocebus_atys
ENSPSIG00000014268	RPUSD4	95	66.667	ENSCLAG00000016553	RPUSD4	79	66.667	Chinchilla_lanigera
ENSPSIG00000014268	RPUSD4	95	67.785	ENSCSAG00000002274	RPUSD4	79	67.785	Chlorocebus_sabaeus
ENSPSIG00000014268	RPUSD4	85	67.658	ENSCHOG00000010249	RPUSD4	94	67.658	Choloepus_hoffmanni
ENSPSIG00000014268	RPUSD4	92	86.897	ENSCPBG00000011175	RPUSD4	100	86.897	Chrysemys_picta_bellii
ENSPSIG00000014268	RPUSD4	86	39.568	ENSCSAVG00000000872	-	54	39.568	Ciona_savignyi
ENSPSIG00000014268	RPUSD4	95	67.450	ENSCANG00000039684	RPUSD4	79	67.450	Colobus_angolensis_palliatus
ENSPSIG00000014268	RPUSD4	97	66.013	ENSCGRG00001024141	Rpusd4	81	66.013	Cricetulus_griseus_chok1gshd
ENSPSIG00000014268	RPUSD4	97	66.013	ENSCGRG00000014415	Rpusd4	81	66.013	Cricetulus_griseus_crigri
ENSPSIG00000014268	RPUSD4	95	55.116	ENSCVAG00000008761	rpusd4	77	55.116	Cyprinodon_variegatus
ENSPSIG00000014268	RPUSD4	95	55.446	ENSCVAG00000000392	rpusd4	85	55.446	Cyprinodon_variegatus
ENSPSIG00000014268	RPUSD4	95	53.000	ENSDARG00000012674	rpusd4	84	53.000	Danio_rerio
ENSPSIG00000014268	RPUSD4	95	67.667	ENSDNOG00000020026	RPUSD4	79	67.667	Dasypus_novemcinctus
ENSPSIG00000014268	RPUSD4	95	65.667	ENSDORG00000016717	Rpusd4	79	65.667	Dipodomys_ordii
ENSPSIG00000014268	RPUSD4	95	65.000	ENSETEG00000013953	RPUSD4	80	65.000	Echinops_telfairi
ENSPSIG00000014268	RPUSD4	95	65.667	ENSEASG00005022982	RPUSD4	79	65.667	Equus_asinus_asinus
ENSPSIG00000014268	RPUSD4	95	65.333	ENSECAG00000000557	RPUSD4	79	65.333	Equus_caballus
ENSPSIG00000014268	RPUSD4	74	70.370	ENSEEUG00000014036	RPUSD4	61	70.370	Erinaceus_europaeus
ENSPSIG00000014268	RPUSD4	95	59.136	ENSELUG00000008075	rpusd4	79	59.136	Esox_lucius
ENSPSIG00000014268	RPUSD4	95	67.667	ENSFCAG00000029789	RPUSD4	79	67.667	Felis_catus
ENSPSIG00000014268	RPUSD4	95	72.241	ENSFALG00000005171	RPUSD4	88	72.241	Ficedula_albicollis
ENSPSIG00000014268	RPUSD4	95	65.333	ENSFDAG00000014307	RPUSD4	80	65.333	Fukomys_damarensis
ENSPSIG00000014268	RPUSD4	97	53.571	ENSFHEG00000004329	rpusd4	79	53.571	Fundulus_heteroclitus
ENSPSIG00000014268	RPUSD4	94	51.171	ENSGMOG00000017726	rpusd4	89	51.171	Gadus_morhua
ENSPSIG00000014268	RPUSD4	89	74.552	ENSGALG00000024326	RPUSD4	82	72.635	Gallus_gallus
ENSPSIG00000014268	RPUSD4	93	52.189	ENSGAFG00000021559	rpusd4	75	52.189	Gambusia_affinis
ENSPSIG00000014268	RPUSD4	93	52.365	ENSGACG00000001657	rpusd4	99	50.699	Gasterosteus_aculeatus
ENSPSIG00000014268	RPUSD4	95	84.667	ENSGAGG00000000132	RPUSD4	83	84.667	Gopherus_agassizii
ENSPSIG00000014268	RPUSD4	95	67.114	ENSGGOG00000016494	RPUSD4	79	67.114	Gorilla_gorilla
ENSPSIG00000014268	RPUSD4	93	54.545	ENSHBUG00000022838	rpusd4	76	54.545	Haplochromis_burtoni
ENSPSIG00000014268	RPUSD4	95	66.333	ENSHGLG00000002285	RPUSD4	79	66.333	Heterocephalus_glaber_female
ENSPSIG00000014268	RPUSD4	95	66.333	ENSHGLG00100006385	RPUSD4	79	66.333	Heterocephalus_glaber_male
ENSPSIG00000014268	RPUSD4	94	54.333	ENSHCOG00000006612	rpusd4	76	54.333	Hippocampus_comes
ENSPSIG00000014268	RPUSD4	96	57.096	ENSIPUG00000023879	rusd4	78	57.096	Ictalurus_punctatus
ENSPSIG00000014268	RPUSD4	95	68.000	ENSSTOG00000025280	RPUSD4	82	68.000	Ictidomys_tridecemlineatus
ENSPSIG00000014268	RPUSD4	95	66.000	ENSJJAG00000018673	Rpusd4	81	66.000	Jaculus_jaculus
ENSPSIG00000014268	RPUSD4	93	55.405	ENSKMAG00000021805	rpusd4	77	55.405	Kryptolebias_marmoratus
ENSPSIG00000014268	RPUSD4	93	53.872	ENSLBEG00000020394	rpusd4	83	53.872	Labrus_bergylta
ENSPSIG00000014268	RPUSD4	95	67.450	ENSLACG00000011028	RPUSD4	75	67.450	Latimeria_chalumnae
ENSPSIG00000014268	RPUSD4	95	51.485	ENSLOCG00000003124	rpusd4	80	51.485	Lepisosteus_oculatus
ENSPSIG00000014268	RPUSD4	95	66.000	ENSLAFG00000005211	RPUSD4	100	57.192	Loxodonta_africana
ENSPSIG00000014268	RPUSD4	95	67.450	ENSMFAG00000039513	RPUSD4	79	67.450	Macaca_fascicularis
ENSPSIG00000014268	RPUSD4	95	67.785	ENSMMUG00000007933	RPUSD4	79	67.785	Macaca_mulatta
ENSPSIG00000014268	RPUSD4	95	67.450	ENSMNEG00000027414	RPUSD4	79	67.450	Macaca_nemestrina
ENSPSIG00000014268	RPUSD4	96	66.667	ENSMLEG00000042461	RPUSD4	80	66.667	Mandrillus_leucophaeus
ENSPSIG00000014268	RPUSD4	93	52.862	ENSMAMG00000023839	rpusd4	76	52.862	Mastacembelus_armatus
ENSPSIG00000014268	RPUSD4	93	54.545	ENSMZEG00005011999	rpusd4	76	54.545	Maylandia_zebra
ENSPSIG00000014268	RPUSD4	88	74.368	ENSMGAG00000000840	RPUSD4	91	72.297	Meleagris_gallopavo
ENSPSIG00000014268	RPUSD4	95	68.000	ENSMAUG00000010280	Rpusd4	79	68.000	Mesocricetus_auratus
ENSPSIG00000014268	RPUSD4	95	66.443	ENSMICG00000015979	RPUSD4	89	66.443	Microcebus_murinus
ENSPSIG00000014268	RPUSD4	95	66.779	ENSMOCG00000000661	Rpusd4	79	66.779	Microtus_ochrogaster
ENSPSIG00000014268	RPUSD4	96	53.289	ENSMMOG00000021731	rpusd4	89	53.289	Mola_mola
ENSPSIG00000014268	RPUSD4	90	68.310	ENSMODG00000004521	RPUSD4	72	68.310	Monodelphis_domestica
ENSPSIG00000014268	RPUSD4	95	51.987	ENSMALG00000005839	rpusd4	91	51.987	Monopterus_albus
ENSPSIG00000014268	RPUSD4	99	64.331	MGP_CAROLIEiJ_G0031954	Rpusd4	83	64.331	Mus_caroli
ENSPSIG00000014268	RPUSD4	95	66.333	ENSMUSG00000032044	Rpusd4	79	66.333	Mus_musculus
ENSPSIG00000014268	RPUSD4	95	67.000	MGP_PahariEiJ_G0014819	Rpusd4	79	67.000	Mus_pahari
ENSPSIG00000014268	RPUSD4	95	66.667	MGP_SPRETEiJ_G0033078	Rpusd4	79	66.667	Mus_spretus
ENSPSIG00000014268	RPUSD4	95	66.333	ENSMPUG00000006608	RPUSD4	79	66.333	Mustela_putorius_furo
ENSPSIG00000014268	RPUSD4	95	67.224	ENSMLUG00000017328	-	79	67.224	Myotis_lucifugus
ENSPSIG00000014268	RPUSD4	81	64.961	ENSMLUG00000029348	-	99	64.961	Myotis_lucifugus
ENSPSIG00000014268	RPUSD4	95	68.000	ENSNGAG00000020847	Rpusd4	79	68.000	Nannospalax_galili
ENSPSIG00000014268	RPUSD4	93	54.545	ENSNBRG00000005207	rpusd4	86	54.545	Neolamprologus_brichardi
ENSPSIG00000014268	RPUSD4	95	67.114	ENSNLEG00000007465	RPUSD4	79	67.114	Nomascus_leucogenys
ENSPSIG00000014268	RPUSD4	95	69.000	ENSMEUG00000004370	RPUSD4	80	69.000	Notamacropus_eugenii
ENSPSIG00000014268	RPUSD4	95	65.333	ENSODEG00000004577	RPUSD4	79	65.333	Octodon_degus
ENSPSIG00000014268	RPUSD4	93	55.219	ENSONIG00000018879	rpusd4	80	55.219	Oreochromis_niloticus
ENSPSIG00000014268	RPUSD4	92	69.492	ENSOANG00000007247	RPUSD4	96	68.750	Ornithorhynchus_anatinus
ENSPSIG00000014268	RPUSD4	95	66.445	ENSOCUG00000017039	RPUSD4	80	66.445	Oryctolagus_cuniculus
ENSPSIG00000014268	RPUSD4	92	53.767	ENSORLG00000002750	rpusd4	81	53.401	Oryzias_latipes
ENSPSIG00000014268	RPUSD4	92	53.061	ENSORLG00020002044	rpusd4	73	53.061	Oryzias_latipes_hni
ENSPSIG00000014268	RPUSD4	92	53.401	ENSORLG00015020034	rpusd4	73	53.401	Oryzias_latipes_hsok
ENSPSIG00000014268	RPUSD4	92	55.479	ENSOMEG00000004861	rpusd4	72	55.479	Oryzias_melastigma
ENSPSIG00000014268	RPUSD4	95	68.333	ENSOGAG00000008922	RPUSD4	79	68.333	Otolemur_garnettii
ENSPSIG00000014268	RPUSD4	95	65.333	ENSOARG00000012238	RPUSD4	79	65.333	Ovis_aries
ENSPSIG00000014268	RPUSD4	95	67.114	ENSPPAG00000042883	RPUSD4	73	67.114	Pan_paniscus
ENSPSIG00000014268	RPUSD4	95	67.333	ENSPPRG00000003081	RPUSD4	79	67.333	Panthera_pardus
ENSPSIG00000014268	RPUSD4	95	67.333	ENSPTIG00000012059	RPUSD4	85	67.333	Panthera_tigris_altaica
ENSPSIG00000014268	RPUSD4	95	67.114	ENSPTRG00000004454	RPUSD4	79	67.114	Pan_troglodytes
ENSPSIG00000014268	RPUSD4	95	67.450	ENSPANG00000015040	RPUSD4	79	67.450	Papio_anubis
ENSPSIG00000014268	RPUSD4	95	64.784	ENSPKIG00000023986	rpusd4	77	64.784	Paramormyrops_kingsleyae
ENSPSIG00000014268	RPUSD4	95	50.000	ENSPMGG00000002806	rpusd4	84	49.835	Periophthalmus_magnuspinnatus
ENSPSIG00000014268	RPUSD4	95	59.667	ENSPEMG00000000278	Rpusd4	78	59.667	Peromyscus_maniculatus_bairdii
ENSPSIG00000014268	RPUSD4	97	43.155	ENSPMAG00000008183	rpusd4	97	43.155	Petromyzon_marinus
ENSPSIG00000014268	RPUSD4	95	67.667	ENSPCIG00000010212	RPUSD4	82	67.667	Phascolarctos_cinereus
ENSPSIG00000014268	RPUSD4	93	52.174	ENSPFOG00000019030	rpusd4	78	52.174	Poecilia_formosa
ENSPSIG00000014268	RPUSD4	93	52.862	ENSPLAG00000016848	rpusd4	75	52.862	Poecilia_latipinna
ENSPSIG00000014268	RPUSD4	93	52.525	ENSPMEG00000017534	rpusd4	75	52.525	Poecilia_mexicana
ENSPSIG00000014268	RPUSD4	83	56.391	ENSPREG00000005689	rpusd4	69	56.391	Poecilia_reticulata
ENSPSIG00000014268	RPUSD4	95	67.450	ENSPPYG00000004043	RPUSD4	79	67.450	Pongo_abelii
ENSPSIG00000014268	RPUSD4	73	72.222	ENSPCAG00000000753	RPUSD4	62	72.222	Procavia_capensis
ENSPSIG00000014268	RPUSD4	95	60.333	ENSPCOG00000020694	RPUSD4	79	60.333	Propithecus_coquereli
ENSPSIG00000014268	RPUSD4	97	66.013	ENSPVAG00000000988	RPUSD4	81	66.013	Pteropus_vampyrus
ENSPSIG00000014268	RPUSD4	93	54.545	ENSPNYG00000009652	rpusd4	76	54.545	Pundamilia_nyererei
ENSPSIG00000014268	RPUSD4	96	53.465	ENSPNAG00000012264	rpusd4	80	53.465	Pygocentrus_nattereri
ENSPSIG00000014268	RPUSD4	99	64.331	ENSRNOG00000011567	Rpusd4	83	64.331	Rattus_norvegicus
ENSPSIG00000014268	RPUSD4	94	67.677	ENSRBIG00000034842	RPUSD4	79	67.450	Rhinopithecus_bieti
ENSPSIG00000014268	RPUSD4	94	67.677	ENSRROG00000039753	RPUSD4	79	67.450	Rhinopithecus_roxellana
ENSPSIG00000014268	RPUSD4	95	68.121	ENSSBOG00000030413	RPUSD4	80	68.121	Saimiri_boliviensis_boliviensis
ENSPSIG00000014268	RPUSD4	95	67.333	ENSSHAG00000008304	RPUSD4	99	67.333	Sarcophilus_harrisii
ENSPSIG00000014268	RPUSD4	95	61.130	ENSSFOG00015006203	rpusd4	81	61.130	Scleropages_formosus
ENSPSIG00000014268	RPUSD4	93	54.515	ENSSMAG00000020978	rpusd4	77	54.762	Scophthalmus_maximus
ENSPSIG00000014268	RPUSD4	93	53.512	ENSSDUG00000013399	rpusd4	78	53.512	Seriola_dumerili
ENSPSIG00000014268	RPUSD4	93	53.512	ENSSLDG00000023507	rpusd4	78	53.512	Seriola_lalandi_dorsalis
ENSPSIG00000014268	RPUSD4	95	77.181	ENSSPUG00000001401	RPUSD4	83	77.333	Sphenodon_punctatus
ENSPSIG00000014268	RPUSD4	95	53.642	ENSSPAG00000012163	rpusd4	77	53.642	Stegastes_partitus
ENSPSIG00000014268	RPUSD4	95	64.667	ENSSSCG00000015233	RPUSD4	79	64.667	Sus_scrofa
ENSPSIG00000014268	RPUSD4	95	70.569	ENSTGUG00000000773	RPUSD4	99	70.569	Taeniopygia_guttata
ENSPSIG00000014268	RPUSD4	93	52.703	ENSTRUG00000012283	rpusd4	76	52.703	Takifugu_rubripes
ENSPSIG00000014268	RPUSD4	95	51.987	ENSTNIG00000014676	rpusd4	77	51.987	Tetraodon_nigroviridis
ENSPSIG00000014268	RPUSD4	95	64.333	ENSTTRG00000001555	RPUSD4	79	64.333	Tursiops_truncatus
ENSPSIG00000014268	RPUSD4	95	66.667	ENSUMAG00000002219	RPUSD4	79	66.667	Ursus_maritimus
ENSPSIG00000014268	RPUSD4	64	66.010	ENSVPAG00000001066	RPUSD4	76	66.010	Vicugna_pacos
ENSPSIG00000014268	RPUSD4	95	66.333	ENSVVUG00000020101	RPUSD4	79	66.333	Vulpes_vulpes
ENSPSIG00000014268	RPUSD4	93	52.862	ENSXCOG00000004676	rpusd4	77	52.525	Xiphophorus_couchianus
ENSPSIG00000014268	RPUSD4	93	52.862	ENSXMAG00000023351	rpusd4	75	52.862	Xiphophorus_maculatus