EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000014455 (Gene tree)
Gene ID: 102451708
Gene Symbol: GZF1
Alias: -
Full Name: GDNF inducible zinc finger protein 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 10821 bases
Position: chrJH212622.1:41106-51926
Accession: 102451708
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	1	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	2	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	3	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	4	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	5	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	6	7
ENSPSIP00000016225	zf-C2H2	PF00096.26	9.4e-35	7	7
ENSPSIP00000016225	zf-met	PF12874.7	9.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000016301	GZF1-201	4127	XM_006135996	ENSPSIP00000016225	707 (aa)	XP_006136058	K7G7G4

Gene Model

Click here to download ENSPSIG00000014455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000014455	GZF1	85	53.651	ENSPSIG00000014208	-	78	55.517
ENSPSIG00000014455	GZF1	64	34.615	ENSPSIG00000006603	ZBTB16	60	35.156
ENSPSIG00000014455	GZF1	50	41.026	ENSPSIG00000013505	PRDM5	73	41.026
ENSPSIG00000014455	GZF1	84	44.196	ENSPSIG00000009423	ZBTB24	73	43.868
ENSPSIG00000014455	GZF1	83	40.244	ENSPSIG00000002533	ZBTB20	58	40.244
ENSPSIG00000014455	GZF1	57	36.058	ENSPSIG00000018010	ZBTB47	58	37.349
ENSPSIG00000014455	GZF1	54	43.478	ENSPSIG00000003152	-	78	43.919
ENSPSIG00000014455	GZF1	82	39.091	ENSPSIG00000001041	ZBTB26	85	39.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014455	GZF1	100	76.050	ENSG00000125812	GZF1	100	83.333	Homo_sapiens
ENSPSIG00000014455	GZF1	86	48.220	ENSAPOG00000012930	GZF1	96	48.371	Acanthochromis_polyacanthus
ENSPSIG00000014455	GZF1	100	70.263	ENSAMEG00000009853	GZF1	100	71.071	Ailuropoda_melanoleuca
ENSPSIG00000014455	GZF1	84	49.236	ENSAOCG00000024275	GZF1	93	49.662	Amphiprion_ocellaris
ENSPSIG00000014455	GZF1	97	44.660	ENSAPEG00000017195	GZF1	81	45.904	Amphiprion_percula
ENSPSIG00000014455	GZF1	99	40.111	ENSATEG00000018374	GZF1	88	78.142	Anabas_testudineus
ENSPSIG00000014455	GZF1	100	75.630	ENSANAG00000028240	GZF1	100	76.331	Aotus_nancymaae
ENSPSIG00000014455	GZF1	85	49.433	ENSAMXG00000017178	GZF1	81	48.089	Astyanax_mexicanus
ENSPSIG00000014455	GZF1	100	75.210	ENSCJAG00000000733	GZF1	100	75.910	Callithrix_jacchus
ENSPSIG00000014455	GZF1	100	74.791	ENSCAFG00000005142	GZF1	100	74.652	Canis_familiaris
ENSPSIG00000014455	GZF1	56	78.378	ENSCAFG00020027463	-	100	78.378	Canis_lupus_dingo
ENSPSIG00000014455	GZF1	100	72.028	ENSTSYG00000028054	GZF1	100	71.528	Carlito_syrichta
ENSPSIG00000014455	GZF1	100	68.106	ENSCAPG00000002173	GZF1	100	68.245	Cavia_aperea
ENSPSIG00000014455	GZF1	100	68.106	ENSCPOG00000010790	GZF1	100	68.245	Cavia_porcellus
ENSPSIG00000014455	GZF1	100	75.770	ENSCCAG00000035601	GZF1	100	76.611	Cebus_capucinus
ENSPSIG00000014455	GZF1	100	75.804	ENSCATG00000039279	GZF1	100	75.833	Cercocebus_atys
ENSPSIG00000014455	GZF1	100	67.881	ENSCLAG00000014714	GZF1	100	67.476	Chinchilla_lanigera
ENSPSIG00000014455	GZF1	100	75.910	ENSCSAG00000011054	GZF1	100	75.910	Chlorocebus_sabaeus
ENSPSIG00000014455	GZF1	100	93.494	ENSCPBG00000023415	GZF1	100	93.494	Chrysemys_picta_bellii
ENSPSIG00000014455	GZF1	100	75.627	ENSCANG00000041260	GZF1	100	74.931	Colobus_angolensis_palliatus
ENSPSIG00000014455	GZF1	100	69.444	ENSCGRG00001003944	Gzf1	100	70.183	Cricetulus_griseus_chok1gshd
ENSPSIG00000014455	GZF1	100	69.444	ENSCGRG00000012721	Gzf1	100	70.183	Cricetulus_griseus_crigri
ENSPSIG00000014455	GZF1	60	70.270	ENSCVAG00000013068	-	73	46.667	Cyprinodon_variegatus
ENSPSIG00000014455	GZF1	80	69.965	ENSDNOG00000014290	GZF1	100	72.049	Dasypus_novemcinctus
ENSPSIG00000014455	GZF1	100	74.583	ENSDORG00000011855	Gzf1	100	74.069	Dipodomys_ordii
ENSPSIG00000014455	GZF1	66	67.188	ENSEBUG00000004858	GZF1	62	67.188	Eptatretus_burgeri
ENSPSIG00000014455	GZF1	56	78.829	ENSECAG00000040045	-	100	78.829	Equus_caballus
ENSPSIG00000014455	GZF1	82	50.188	ENSELUG00000013581	GZF1	86	50.649	Esox_lucius
ENSPSIG00000014455	GZF1	100	74.861	ENSFCAG00000006484	GZF1	100	73.288	Felis_catus
ENSPSIG00000014455	GZF1	92	69.457	ENSFDAG00000019468	GZF1	96	69.310	Fukomys_damarensis
ENSPSIG00000014455	GZF1	88	45.833	ENSFHEG00000020498	GZF1	77	46.213	Fundulus_heteroclitus
ENSPSIG00000014455	GZF1	86	48.553	ENSGMOG00000011017	GZF1	99	47.673	Gadus_morhua
ENSPSIG00000014455	GZF1	100	88.543	ENSGALG00000053640	GZF1	100	88.543	Gallus_gallus
ENSPSIG00000014455	GZF1	88	45.891	ENSGAFG00000008725	GZF1	74	45.736	Gambusia_affinis
ENSPSIG00000014455	GZF1	86	46.802	ENSGACG00000012415	GZF1	99	71.429	Gasterosteus_aculeatus
ENSPSIG00000014455	GZF1	100	75.770	ENSGGOG00000023248	GZF1	100	75.770	Gorilla_gorilla
ENSPSIG00000014455	GZF1	100	68.022	ENSHGLG00000008891	GZF1	100	67.886	Heterocephalus_glaber_female
ENSPSIG00000014455	GZF1	100	68.022	ENSHGLG00100015117	GZF1	100	67.886	Heterocephalus_glaber_male
ENSPSIG00000014455	GZF1	86	46.129	ENSHCOG00000004326	GZF1	85	39.196	Hippocampus_comes
ENSPSIG00000014455	GZF1	100	73.728	ENSSTOG00000009820	GZF1	100	75.348	Ictidomys_tridecemlineatus
ENSPSIG00000014455	GZF1	100	73.174	ENSJJAG00000008172	Gzf1	100	73.082	Jaculus_jaculus
ENSPSIG00000014455	GZF1	76	72.632	ENSKMAG00000001453	-	59	73.404	Kryptolebias_marmoratus
ENSPSIG00000014455	GZF1	85	48.889	ENSLBEG00000025803	-	73	48.607	Labrus_bergylta
ENSPSIG00000014455	GZF1	100	76.620	ENSLAFG00000002458	GZF1	100	76.620	Loxodonta_africana
ENSPSIG00000014455	GZF1	100	75.804	ENSMFAG00000042408	GZF1	100	75.833	Macaca_fascicularis
ENSPSIG00000014455	GZF1	100	75.804	ENSMMUG00000022387	GZF1	100	75.833	Macaca_mulatta
ENSPSIG00000014455	GZF1	100	75.910	ENSMNEG00000033117	GZF1	100	75.910	Macaca_nemestrina
ENSPSIG00000014455	GZF1	100	75.910	ENSMLEG00000036831	GZF1	100	75.910	Mandrillus_leucophaeus
ENSPSIG00000014455	GZF1	99	43.691	ENSMAMG00000011931	-	54	69.128	Mastacembelus_armatus
ENSPSIG00000014455	GZF1	86	75.336	ENSMAUG00000019656	Gzf1	100	73.762	Mesocricetus_auratus
ENSPSIG00000014455	GZF1	100	74.825	ENSMICG00000046070	GZF1	100	74.545	Microcebus_murinus
ENSPSIG00000014455	GZF1	100	70.851	ENSMOCG00000017816	Gzf1	100	70.556	Microtus_ochrogaster
ENSPSIG00000014455	GZF1	86	48.304	ENSMMOG00000004395	-	75	48.203	Mola_mola
ENSPSIG00000014455	GZF1	100	80.367	ENSMODG00000006238	GZF1	100	85.271	Monodelphis_domestica
ENSPSIG00000014455	GZF1	100	72.145	MGP_CAROLIEiJ_G0024409	Gzf1	100	72.549	Mus_caroli
ENSPSIG00000014455	GZF1	100	72.486	ENSMUSG00000027439	Gzf1	100	72.433	Mus_musculus
ENSPSIG00000014455	GZF1	100	71.827	MGP_PahariEiJ_G0025852	Gzf1	100	71.770	Mus_pahari
ENSPSIG00000014455	GZF1	100	72.626	MGP_SPRETEiJ_G0025327	Gzf1	100	72.574	Mus_spretus
ENSPSIG00000014455	GZF1	100	73.093	ENSMPUG00000001160	GZF1	89	73.509	Mustela_putorius_furo
ENSPSIG00000014455	GZF1	98	71.429	ENSMLUG00000002194	GZF1	100	71.773	Myotis_lucifugus
ENSPSIG00000014455	GZF1	100	74.022	ENSNGAG00000024012	Gzf1	100	73.766	Nannospalax_galili
ENSPSIG00000014455	GZF1	85	42.130	ENSNBRG00000019987	GZF1	69	63.830	Neolamprologus_brichardi
ENSPSIG00000014455	GZF1	100	75.770	ENSNLEG00000011565	GZF1	100	75.630	Nomascus_leucogenys
ENSPSIG00000014455	GZF1	100	70.782	ENSOPRG00000004697	GZF1	100	71.703	Ochotona_princeps
ENSPSIG00000014455	GZF1	100	56.780	ENSODEG00000013020	GZF1	100	66.384	Octodon_degus
ENSPSIG00000014455	GZF1	86	48.480	ENSONIG00000000989	GZF1	99	48.243	Oreochromis_niloticus
ENSPSIG00000014455	GZF1	100	73.870	ENSOCUG00000025214	GZF1	100	73.870	Oryctolagus_cuniculus
ENSPSIG00000014455	GZF1	100	74.510	ENSOGAG00000028389	GZF1	100	74.017	Otolemur_garnettii
ENSPSIG00000014455	GZF1	100	75.770	ENSPPAG00000028487	GZF1	100	75.490	Pan_paniscus
ENSPSIG00000014455	GZF1	100	74.238	ENSPPRG00000010040	GZF1	100	73.014	Panthera_pardus
ENSPSIG00000014455	GZF1	100	74.377	ENSPTIG00000019328	GZF1	100	73.151	Panthera_tigris_altaica
ENSPSIG00000014455	GZF1	100	75.630	ENSPTRG00000013320	GZF1	100	75.490	Pan_troglodytes
ENSPSIG00000014455	GZF1	100	75.770	ENSPANG00000017419	GZF1	100	75.770	Papio_anubis
ENSPSIG00000014455	GZF1	84	52.033	ENSPKIG00000003781	GZF1	75	51.555	Paramormyrops_kingsleyae
ENSPSIG00000014455	GZF1	68	46.828	ENSPMGG00000003778	-	64	53.488	Periophthalmus_magnuspinnatus
ENSPSIG00000014455	GZF1	100	71.648	ENSPEMG00000011285	Gzf1	100	70.426	Peromyscus_maniculatus_bairdii
ENSPSIG00000014455	GZF1	100	81.780	ENSPCIG00000013803	GZF1	100	81.780	Phascolarctos_cinereus
ENSPSIG00000014455	GZF1	86	47.068	ENSPFOG00000002393	GZF1	99	46.515	Poecilia_formosa
ENSPSIG00000014455	GZF1	86	46.276	ENSPLAG00000005232	GZF1	93	45.455	Poecilia_latipinna
ENSPSIG00000014455	GZF1	88	41.206	ENSPMEG00000020017	-	71	41.206	Poecilia_mexicana
ENSPSIG00000014455	GZF1	88	36.050	ENSPREG00000016398	GZF1	73	41.267	Poecilia_reticulata
ENSPSIG00000014455	GZF1	100	82.836	ENSPPYG00000010766	GZF1	100	63.932	Pongo_abelii
ENSPSIG00000014455	GZF1	81	76.672	ENSPCAG00000007544	GZF1	100	75.643	Procavia_capensis
ENSPSIG00000014455	GZF1	100	75.630	ENSPCOG00000024180	GZF1	100	75.350	Propithecus_coquereli
ENSPSIG00000014455	GZF1	100	75.419	ENSPVAG00000014056	GZF1	100	75.456	Pteropus_vampyrus
ENSPSIG00000014455	GZF1	100	72.385	ENSRNOG00000004735	Gzf1	100	72.331	Rattus_norvegicus
ENSPSIG00000014455	GZF1	100	75.069	ENSRBIG00000028715	GZF1	100	75.485	Rhinopithecus_bieti
ENSPSIG00000014455	GZF1	100	75.278	ENSRROG00000030533	GZF1	100	75.346	Rhinopithecus_roxellana
ENSPSIG00000014455	GZF1	100	75.210	ENSSBOG00000018893	GZF1	100	75.910	Saimiri_boliviensis_boliviensis
ENSPSIG00000014455	GZF1	100	80.650	ENSSHAG00000009367	GZF1	100	80.650	Sarcophilus_harrisii
ENSPSIG00000014455	GZF1	100	46.988	ENSSFOG00015008631	gzf1	83	46.524	Scleropages_formosus
ENSPSIG00000014455	GZF1	99	45.614	ENSSDUG00000008186	GZF1	83	46.238	Seriola_dumerili
ENSPSIG00000014455	GZF1	99	46.492	ENSSLDG00000002382	GZF1	83	46.375	Seriola_lalandi_dorsalis
ENSPSIG00000014455	GZF1	81	82.642	ENSSARG00000010285	GZF1	75	85.897	Sorex_araneus
ENSPSIG00000014455	GZF1	99	75.918	ENSSPUG00000004147	GZF1	100	80.305	Sphenodon_punctatus
ENSPSIG00000014455	GZF1	85	45.191	ENSSPAG00000011759	GZF1	75	46.211	Stegastes_partitus
ENSPSIG00000014455	GZF1	85	69.268	ENSSSCG00000007117	GZF1	100	69.106	Sus_scrofa
ENSPSIG00000014455	GZF1	81	47.931	ENSTNIG00000010722	GZF1	99	46.972	Tetraodon_nigroviridis
ENSPSIG00000014455	GZF1	100	72.538	ENSTTRG00000011345	GZF1	100	72.677	Tursiops_truncatus
ENSPSIG00000014455	GZF1	56	78.378	ENSUAMG00000021858	-	100	78.378	Ursus_americanus
ENSPSIG00000014455	GZF1	100	73.232	ENSUMAG00000004065	GZF1	100	73.889	Ursus_maritimus
ENSPSIG00000014455	GZF1	100	74.930	ENSVVUG00000012086	GZF1	100	74.930	Vulpes_vulpes
ENSPSIG00000014455	GZF1	100	63.752	ENSXETG00000004510	gzf1	100	63.418	Xenopus_tropicalis
ENSPSIG00000014455	GZF1	88	45.904	ENSXMAG00000023249	GZF1	75	45.639	Xiphophorus_maculatus