EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000014559 (Gene tree)
Gene ID: 102444380
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 29360 bases
Position: chrJH209116.1:6038922-6068281
Accession: 102444380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000016321	PPR	PF01535.20	4.5e-06	1	1
ENSPSIP00000016321	MRP-S27	PF10037.9	2.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000016397	PTCD2-201	1183	XM_006124298	ENSPSIP00000016321	323 (aa)	XP_006124360	K7G7R0

Gene Model

Click here to download ENSPSIG00000014559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000014559	PTCD2	95	61.238	ENSG00000049883	PTCD2	86	56.322	Homo_sapiens
ENSPSIG00000014559	PTCD2	97	50.962	ENSAPOG00000020682	ptcd2	82	50.962	Acanthochromis_polyacanthus
ENSPSIG00000014559	PTCD2	96	61.290	ENSAMEG00000007194	PTCD2	80	61.290	Ailuropoda_melanoleuca
ENSPSIG00000014559	PTCD2	90	47.138	ENSACIG00000002053	ptcd2	89	47.138	Amphilophus_citrinellus
ENSPSIG00000014559	PTCD2	97	50.641	ENSAOCG00000006616	ptcd2	80	50.641	Amphiprion_ocellaris
ENSPSIG00000014559	PTCD2	97	50.962	ENSAPEG00000022926	ptcd2	80	50.962	Amphiprion_percula
ENSPSIG00000014559	PTCD2	97	68.153	ENSACAG00000009747	PTCD2	80	68.153	Anolis_carolinensis
ENSPSIG00000014559	PTCD2	98	59.621	ENSANAG00000029353	PTCD2	82	59.621	Aotus_nancymaae
ENSPSIG00000014559	PTCD2	94	48.684	ENSACLG00000027742	ptcd2	78	48.684	Astatotilapia_calliptera
ENSPSIG00000014559	PTCD2	97	45.541	ENSAMXG00000029404	ptcd2	84	45.541	Astyanax_mexicanus
ENSPSIG00000014559	PTCD2	98	59.306	ENSBTAG00000014675	PTCD2	83	59.306	Bos_taurus
ENSPSIG00000014559	PTCD2	98	59.937	ENSCJAG00000016364	PTCD2	82	59.937	Callithrix_jacchus
ENSPSIG00000014559	PTCD2	98	62.540	ENSCAFG00000007982	PTCD2	74	62.540	Canis_familiaris
ENSPSIG00000014559	PTCD2	93	63.576	ENSCAFG00020019147	PTCD2	85	63.576	Canis_lupus_dingo
ENSPSIG00000014559	PTCD2	98	59.494	ENSCHIG00000017118	PTCD2	82	59.494	Capra_hircus
ENSPSIG00000014559	PTCD2	98	57.729	ENSCPOG00000040168	PTCD2	83	57.729	Cavia_porcellus
ENSPSIG00000014559	PTCD2	92	59.396	ENSCCAG00000021996	-	92	59.396	Cebus_capucinus
ENSPSIG00000014559	PTCD2	98	59.306	ENSCCAG00000029389	-	82	59.306	Cebus_capucinus
ENSPSIG00000014559	PTCD2	96	62.460	ENSCATG00000019069	PTCD2	81	62.460	Cercocebus_atys
ENSPSIG00000014559	PTCD2	98	57.098	ENSCLAG00000000072	PTCD2	83	57.098	Chinchilla_lanigera
ENSPSIG00000014559	PTCD2	96	62.460	ENSCSAG00000015623	PTCD2	83	60.815	Chlorocebus_sabaeus
ENSPSIG00000014559	PTCD2	72	62.353	ENSCHOG00000010634	PTCD2	67	62.353	Choloepus_hoffmanni
ENSPSIG00000014559	PTCD2	99	80.878	ENSCPBG00000000216	PTCD2	87	80.878	Chrysemys_picta_bellii
ENSPSIG00000014559	PTCD2	96	62.460	ENSCANG00000035636	PTCD2	80	62.460	Colobus_angolensis_palliatus
ENSPSIG00000014559	PTCD2	96	61.415	ENSCGRG00001015289	Ptcd2	68	61.415	Cricetulus_griseus_chok1gshd
ENSPSIG00000014559	PTCD2	96	61.415	ENSCGRG00000006193	Ptcd2	68	61.415	Cricetulus_griseus_crigri
ENSPSIG00000014559	PTCD2	94	51.645	ENSCVAG00000001285	ptcd2	78	51.645	Cyprinodon_variegatus
ENSPSIG00000014559	PTCD2	96	51.780	ENSDARG00000035391	ptcd2	80	51.780	Danio_rerio
ENSPSIG00000014559	PTCD2	98	61.199	ENSDNOG00000008719	PTCD2	83	61.199	Dasypus_novemcinctus
ENSPSIG00000014559	PTCD2	95	62.866	ENSDORG00000004921	Ptcd2	79	62.866	Dipodomys_ordii
ENSPSIG00000014559	PTCD2	98	55.172	ENSETEG00000016542	PTCD2	82	55.172	Echinops_telfairi
ENSPSIG00000014559	PTCD2	99	60.436	ENSEASG00005018038	PTCD2	84	60.436	Equus_asinus_asinus
ENSPSIG00000014559	PTCD2	98	60.883	ENSECAG00000007022	PTCD2	82	60.883	Equus_caballus
ENSPSIG00000014559	PTCD2	96	58.710	ENSEEUG00000014031	PTCD2	80	58.710	Erinaceus_europaeus
ENSPSIG00000014559	PTCD2	96	51.780	ENSELUG00000003584	ptcd2	80	51.780	Esox_lucius
ENSPSIG00000014559	PTCD2	84	62.593	ENSFCAG00000045432	PTCD2	63	62.593	Felis_catus
ENSPSIG00000014559	PTCD2	88	63.958	ENSFALG00000010299	PTCD2	86	63.958	Ficedula_albicollis
ENSPSIG00000014559	PTCD2	98	58.675	ENSFDAG00000018461	PTCD2	83	58.675	Fukomys_damarensis
ENSPSIG00000014559	PTCD2	95	51.935	ENSGMOG00000003637	ptcd2	80	51.935	Gadus_morhua
ENSPSIG00000014559	PTCD2	97	61.859	ENSGALG00000038260	PTCD2	82	61.859	Gallus_gallus
ENSPSIG00000014559	PTCD2	99	88.125	ENSGAGG00000021952	PTCD2	82	88.125	Gopherus_agassizii
ENSPSIG00000014559	PTCD2	95	61.238	ENSGGOG00000010695	PTCD2	79	61.238	Gorilla_gorilla
ENSPSIG00000014559	PTCD2	94	48.355	ENSHBUG00000009191	ptcd2	78	48.355	Haplochromis_burtoni
ENSPSIG00000014559	PTCD2	98	59.937	ENSHGLG00000001234	PTCD2	83	59.937	Heterocephalus_glaber_female
ENSPSIG00000014559	PTCD2	98	59.937	ENSHGLG00100015419	PTCD2	83	59.937	Heterocephalus_glaber_male
ENSPSIG00000014559	PTCD2	98	50.473	ENSHCOG00000001703	ptcd2	82	50.473	Hippocampus_comes
ENSPSIG00000014559	PTCD2	98	50.633	ENSIPUG00000006080	ptcd2	82	50.633	Ictalurus_punctatus
ENSPSIG00000014559	PTCD2	97	60.000	ENSSTOG00000006596	PTCD2	82	60.000	Ictidomys_tridecemlineatus
ENSPSIG00000014559	PTCD2	98	58.991	ENSJJAG00000024388	Ptcd2	83	58.991	Jaculus_jaculus
ENSPSIG00000014559	PTCD2	99	45.768	ENSKMAG00000009329	ptcd2	83	45.768	Kryptolebias_marmoratus
ENSPSIG00000014559	PTCD2	94	51.815	ENSLBEG00000024871	ptcd2	77	51.815	Labrus_bergylta
ENSPSIG00000014559	PTCD2	96	60.450	ENSLOCG00000011122	ptcd2	81	60.450	Lepisosteus_oculatus
ENSPSIG00000014559	PTCD2	86	64.621	ENSLAFG00000004115	PTCD2	90	64.413	Loxodonta_africana
ENSPSIG00000014559	PTCD2	96	62.460	ENSMFAG00000031516	PTCD2	80	62.460	Macaca_fascicularis
ENSPSIG00000014559	PTCD2	96	62.783	ENSMNEG00000007537	PTCD2	81	62.783	Macaca_nemestrina
ENSPSIG00000014559	PTCD2	96	62.460	ENSMLEG00000031093	PTCD2	80	62.460	Mandrillus_leucophaeus
ENSPSIG00000014559	PTCD2	97	50.962	ENSMAMG00000018529	ptcd2	82	50.962	Mastacembelus_armatus
ENSPSIG00000014559	PTCD2	94	48.684	ENSMZEG00005003625	ptcd2	78	48.684	Maylandia_zebra
ENSPSIG00000014559	PTCD2	94	63.366	ENSMGAG00000005033	PTCD2	87	63.366	Meleagris_gallopavo
ENSPSIG00000014559	PTCD2	57	65.405	ENSMAUG00000020253	Ptcd2	58	65.405	Mesocricetus_auratus
ENSPSIG00000014559	PTCD2	98	59.306	ENSMICG00000004535	PTCD2	82	59.306	Microcebus_murinus
ENSPSIG00000014559	PTCD2	98	59.365	ENSMOCG00000019985	Ptcd2	83	59.365	Microtus_ochrogaster
ENSPSIG00000014559	PTCD2	98	60.317	ENSMODG00000001695	PTCD2	82	60.317	Monodelphis_domestica
ENSPSIG00000014559	PTCD2	95	52.117	ENSMALG00000022372	ptcd2	80	52.117	Monopterus_albus
ENSPSIG00000014559	PTCD2	98	57.278	MGP_CAROLIEiJ_G0018829	Ptcd2	83	57.278	Mus_caroli
ENSPSIG00000014559	PTCD2	98	56.646	ENSMUSG00000021650	Ptcd2	83	56.646	Mus_musculus
ENSPSIG00000014559	PTCD2	98	59.177	MGP_PahariEiJ_G0015904	Ptcd2	83	59.177	Mus_pahari
ENSPSIG00000014559	PTCD2	98	57.595	MGP_SPRETEiJ_G0019711	Ptcd2	83	57.595	Mus_spretus
ENSPSIG00000014559	PTCD2	98	61.514	ENSMPUG00000014401	PTCD2	83	61.514	Mustela_putorius_furo
ENSPSIG00000014559	PTCD2	95	60.261	ENSMLUG00000007374	PTCD2	81	58.991	Myotis_lucifugus
ENSPSIG00000014559	PTCD2	98	56.962	ENSNGAG00000005027	Ptcd2	83	56.962	Nannospalax_galili
ENSPSIG00000014559	PTCD2	94	49.013	ENSNBRG00000008174	ptcd2	80	49.013	Neolamprologus_brichardi
ENSPSIG00000014559	PTCD2	81	50.763	ENSNBRG00000000092	-	83	50.763	Neolamprologus_brichardi
ENSPSIG00000014559	PTCD2	95	62.092	ENSNLEG00000004516	PTCD2	79	62.092	Nomascus_leucogenys
ENSPSIG00000014559	PTCD2	85	49.817	ENSMEUG00000014012	-	71	49.817	Notamacropus_eugenii
ENSPSIG00000014559	PTCD2	98	59.177	ENSOPRG00000007290	PTCD2	81	59.177	Ochotona_princeps
ENSPSIG00000014559	PTCD2	98	58.675	ENSODEG00000016417	PTCD2	83	58.675	Octodon_degus
ENSPSIG00000014559	PTCD2	86	52.158	ENSONIG00000011269	ptcd2	82	52.158	Oreochromis_niloticus
ENSPSIG00000014559	PTCD2	98	60.252	ENSOCUG00000007970	PTCD2	83	60.252	Oryctolagus_cuniculus
ENSPSIG00000014559	PTCD2	97	46.645	ENSORLG00000003851	ptcd2	80	46.795	Oryzias_latipes
ENSPSIG00000014559	PTCD2	88	49.470	ENSORLG00020009823	ptcd2	74	49.470	Oryzias_latipes_hni
ENSPSIG00000014559	PTCD2	96	46.774	ENSORLG00015016777	ptcd2	87	46.926	Oryzias_latipes_hsok
ENSPSIG00000014559	PTCD2	98	48.113	ENSOMEG00000012396	ptcd2	77	48.113	Oryzias_melastigma
ENSPSIG00000014559	PTCD2	99	58.204	ENSOGAG00000008390	PTCD2	83	58.204	Otolemur_garnettii
ENSPSIG00000014559	PTCD2	98	58.991	ENSOARG00000005087	PTCD2	81	58.991	Ovis_aries
ENSPSIG00000014559	PTCD2	95	61.238	ENSPPAG00000028480	PTCD2	79	61.238	Pan_paniscus
ENSPSIG00000014559	PTCD2	99	58.696	ENSPTRG00000016968	PTCD2	83	58.696	Pan_troglodytes
ENSPSIG00000014559	PTCD2	94	62.500	ENSPANG00000006611	PTCD2	78	62.500	Papio_anubis
ENSPSIG00000014559	PTCD2	96	54.194	ENSPKIG00000019896	ptcd2	81	54.194	Paramormyrops_kingsleyae
ENSPSIG00000014559	PTCD2	98	60.883	ENSPEMG00000000884	Ptcd2	83	60.883	Peromyscus_maniculatus_bairdii
ENSPSIG00000014559	PTCD2	98	60.759	ENSPCIG00000029047	PTCD2	82	60.759	Phascolarctos_cinereus
ENSPSIG00000014559	PTCD2	94	49.013	ENSPLAG00000010456	ptcd2	79	49.013	Poecilia_latipinna
ENSPSIG00000014559	PTCD2	94	49.671	ENSPREG00000021797	ptcd2	77	49.671	Poecilia_reticulata
ENSPSIG00000014559	PTCD2	95	52.769	ENSPPYG00000015543	PTCD2	76	52.769	Pongo_abelii
ENSPSIG00000014559	PTCD2	88	53.521	ENSPCAG00000006806	PTCD2	90	53.521	Procavia_capensis
ENSPSIG00000014559	PTCD2	98	57.053	ENSPVAG00000010935	PTCD2	82	57.053	Pteropus_vampyrus
ENSPSIG00000014559	PTCD2	94	48.355	ENSPNYG00000003122	ptcd2	78	48.355	Pundamilia_nyererei
ENSPSIG00000014559	PTCD2	90	55.326	ENSPNAG00000021490	ptcd2	82	52.848	Pygocentrus_nattereri
ENSPSIG00000014559	PTCD2	98	58.228	ENSRNOG00000028403	Ptcd2	83	58.228	Rattus_norvegicus
ENSPSIG00000014559	PTCD2	96	57.605	ENSRBIG00000032929	PTCD2	79	57.605	Rhinopithecus_bieti
ENSPSIG00000014559	PTCD2	96	62.136	ENSRROG00000000080	PTCD2	81	62.136	Rhinopithecus_roxellana
ENSPSIG00000014559	PTCD2	98	58.991	ENSSBOG00000018911	PTCD2	83	58.991	Saimiri_boliviensis_boliviensis
ENSPSIG00000014559	PTCD2	97	58.786	ENSSHAG00000003833	PTCD2	81	58.786	Sarcophilus_harrisii
ENSPSIG00000014559	PTCD2	97	55.769	ENSSFOG00015015415	ptcd2	81	55.769	Scleropages_formosus
ENSPSIG00000014559	PTCD2	95	47.727	ENSSMAG00000010350	ptcd2	80	47.727	Scophthalmus_maximus
ENSPSIG00000014559	PTCD2	96	52.733	ENSSDUG00000008142	ptcd2	78	52.733	Seriola_dumerili
ENSPSIG00000014559	PTCD2	97	52.564	ENSSLDG00000015284	ptcd2	82	52.564	Seriola_lalandi_dorsalis
ENSPSIG00000014559	PTCD2	87	54.255	ENSSARG00000004983	PTCD2	90	54.255	Sorex_araneus
ENSPSIG00000014559	PTCD2	99	62.813	ENSSPUG00000000176	PTCD2	82	62.813	Sphenodon_punctatus
ENSPSIG00000014559	PTCD2	98	50.476	ENSSPAG00000008591	ptcd2	81	50.476	Stegastes_partitus
ENSPSIG00000014559	PTCD2	97	58.917	ENSSSCG00000016975	PTCD2	73	59.677	Sus_scrofa
ENSPSIG00000014559	PTCD2	94	63.696	ENSTGUG00000005705	PTCD2	88	63.696	Taeniopygia_guttata
ENSPSIG00000014559	PTCD2	98	58.675	ENSTBEG00000016559	PTCD2	82	58.675	Tupaia_belangeri
ENSPSIG00000014559	PTCD2	96	60.323	ENSTTRG00000011851	PTCD2	80	60.323	Tursiops_truncatus
ENSPSIG00000014559	PTCD2	96	61.165	ENSUAMG00000007583	PTCD2	72	61.165	Ursus_americanus
ENSPSIG00000014559	PTCD2	96	60.968	ENSUMAG00000007666	PTCD2	81	60.968	Ursus_maritimus
ENSPSIG00000014559	PTCD2	98	55.975	ENSVPAG00000009597	PTCD2	82	55.975	Vicugna_pacos
ENSPSIG00000014559	PTCD2	95	63.725	ENSVVUG00000007299	-	82	62.342	Vulpes_vulpes
ENSPSIG00000014559	PTCD2	99	59.875	ENSXETG00000031652	PTCD2	83	59.875	Xenopus_tropicalis
ENSPSIG00000014559	PTCD2	94	50.000	ENSXMAG00000005940	ptcd2	72	50.000	Xiphophorus_maculatus