EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPSIG00000014796 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
-
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Pelodiscus_sinensis
Status
putative
Strand
Minus strand
Length
3990 bases
Position
chrJH209112.1:5717083-5721072
Accession
102448007
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPSIP00000016603LSMPF01423.228.8e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPSIT00000016679LSM5-201222XM_006124036ENSPSIP0000001660374 (aa)XP_006124098K7G8J2
Gene Model
Click here to download ENSPSIG00000014796's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000014796's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPSIG00000014796LSM58036.066ENSPSIG00000008935-6536.066
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPSIG00000014796LSM5100100.000ENSG00000106355LSM597100.000Homo_sapiens
ENSPSIG00000014796LSM510097.297ENSAPOG00000020779LSM58297.143Acanthochromis_polyacanthus
ENSPSIG00000014796LSM59197.015ENSAPOG00000011743LSM59796.667Acanthochromis_polyacanthus
ENSPSIG00000014796LSM5100100.000ENSAMEG00000006700LSM581100.000Ailuropoda_melanoleuca
ENSPSIG00000014796LSM55893.023ENSACIG00000019185lsm57793.023Amphilophus_citrinellus
ENSPSIG00000014796LSM510097.297ENSAOCG00000001636lsm58197.297Amphiprion_ocellaris
ENSPSIG00000014796LSM58196.667ENSAPEG00000008201lsm59796.667Amphiprion_percula
ENSPSIG00000014796LSM510097.297ENSAPEG00000008151lsm58197.297Amphiprion_percula
ENSPSIG00000014796LSM59197.015ENSATEG00000020470lsm57393.023Anabas_testudineus
ENSPSIG00000014796LSM5100100.000ENSAPLG00000008171LSM5100100.000Anas_platyrhynchos
ENSPSIG00000014796LSM555100.000ENSACAG00000009530LSM568100.000Anolis_carolinensis
ENSPSIG00000014796LSM5100100.000ENSANAG00000034409-81100.000Aotus_nancymaae
ENSPSIG00000014796LSM510095.946ENSANAG00000024192-7795.946Aotus_nancymaae
ENSPSIG00000014796LSM58590.476ENSANAG00000037758-7890.476Aotus_nancymaae
ENSPSIG00000014796LSM510097.297ENSACLG00000012891lsm58497.297Astatotilapia_calliptera
ENSPSIG00000014796LSM510081.818ENSAMXG00000035543lsm58281.818Astyanax_mexicanus
ENSPSIG00000014796LSM5100100.000ENSBTAG00000002332LSM581100.000Bos_taurus
ENSPSIG00000014796LSM510077.027WBGene00003079lsm-58177.027Caenorhabditis_elegans
ENSPSIG00000014796LSM5100100.000ENSCJAG00000047379LSM55889.189Callithrix_jacchus
ENSPSIG00000014796LSM510086.486ENSCJAG00000005678-8286.486Callithrix_jacchus
ENSPSIG00000014796LSM510098.649ENSCAFG00000019261-8198.649Canis_familiaris
ENSPSIG00000014796LSM5100100.000ENSCAFG00020004946LSM581100.000Canis_lupus_dingo
ENSPSIG00000014796LSM510097.297ENSCHIG00000004079-8197.297Capra_hircus
ENSPSIG00000014796LSM58076.271ENSCHIG00000021428-7872.603Capra_hircus
ENSPSIG00000014796LSM5100100.000ENSCHIG00000024539LSM581100.000Capra_hircus
ENSPSIG00000014796LSM510083.784ENSTSYG00000028728-8083.784Carlito_syrichta
ENSPSIG00000014796LSM58987.879ENSTSYG00000026530-7287.879Carlito_syrichta
ENSPSIG00000014796LSM510068.919ENSTSYG00000036637-7768.919Carlito_syrichta
ENSPSIG00000014796LSM5100100.000ENSTSYG00000006449-81100.000Carlito_syrichta
ENSPSIG00000014796LSM59991.781ENSCAPG00000006980LSM59791.781Cavia_aperea
ENSPSIG00000014796LSM5100100.000ENSCPOG00000036386LSM581100.000Cavia_porcellus
ENSPSIG00000014796LSM5100100.000ENSCCAG00000037808-81100.000Cebus_capucinus
ENSPSIG00000014796LSM58593.651ENSCCAG00000032792-7893.651Cebus_capucinus
ENSPSIG00000014796LSM58978.788ENSCCAG00000037334-8678.788Cebus_capucinus
ENSPSIG00000014796LSM510098.649ENSCCAG00000000821-8198.649Cebus_capucinus
ENSPSIG00000014796LSM510098.649ENSCCAG00000032123-8198.649Cebus_capucinus
ENSPSIG00000014796LSM5100100.000ENSCATG00000040218LSM597100.000Cercocebus_atys
ENSPSIG00000014796LSM59987.671ENSCATG00000014790-7197.561Cercocebus_atys
ENSPSIG00000014796LSM510083.784ENSCLAG00000005062-7383.784Chinchilla_lanigera
ENSPSIG00000014796LSM5100100.000ENSCLAG00000000202LSM581100.000Chinchilla_lanigera
ENSPSIG00000014796LSM581100.000ENSCHOG00000005335LSM579100.000Choloepus_hoffmanni
ENSPSIG00000014796LSM5100100.000ENSCPBG00000013685LSM581100.000Chrysemys_picta_bellii
ENSPSIG00000014796LSM510090.541ENSCING00000020625-8390.541Ciona_intestinalis
ENSPSIG00000014796LSM510090.541ENSCSAVG00000001439-8490.541Ciona_savignyi
ENSPSIG00000014796LSM5100100.000ENSCANG00000039909LSM597100.000Colobus_angolensis_palliatus
ENSPSIG00000014796LSM5100100.000ENSCGRG00001015461Lsm581100.000Cricetulus_griseus_chok1gshd
ENSPSIG00000014796LSM599100.000ENSCGRG00000007677Lsm597100.000Cricetulus_griseus_crigri
ENSPSIG00000014796LSM55893.023ENSCSEG00000015286lsm57393.023Cynoglossus_semilaevis
ENSPSIG00000014796LSM510097.297ENSCVAG00000004262lsm58397.297Cyprinodon_variegatus
ENSPSIG00000014796LSM510097.297ENSDARG00000071573lsm59796.667Danio_rerio
ENSPSIG00000014796LSM5100100.000ENSDNOG00000034958LSM581100.000Dasypus_novemcinctus
ENSPSIG00000014796LSM59787.500ENSDNOG00000049495-7987.500Dasypus_novemcinctus
ENSPSIG00000014796LSM5100100.000ENSDORG00000009422Lsm581100.000Dipodomys_ordii
ENSPSIG00000014796LSM59788.889FBgn0035675CG66107988.889Drosophila_melanogaster
ENSPSIG00000014796LSM59780.556ENSETEG00000016074-9580.556Echinops_telfairi
ENSPSIG00000014796LSM510079.730ENSETEG00000010651-8079.730Echinops_telfairi
ENSPSIG00000014796LSM510078.378ENSETEG00000001469-7878.378Echinops_telfairi
ENSPSIG00000014796LSM59763.889ENSETEG00000000777-7864.384Echinops_telfairi
ENSPSIG00000014796LSM5100100.000ENSETEG00000018068LSM581100.000Echinops_telfairi
ENSPSIG00000014796LSM510094.595ENSEBUG00000008540lsm58194.595Eptatretus_burgeri
ENSPSIG00000014796LSM5100100.000ENSEASG00005003500LSM581100.000Equus_asinus_asinus
ENSPSIG00000014796LSM510082.432ENSECAG00000018445LSM57982.432Equus_caballus
ENSPSIG00000014796LSM57694.643ENSEEUG00000004102LSM59394.643Erinaceus_europaeus
ENSPSIG00000014796LSM510097.297ENSELUG00000007792lsm58197.297Esox_lucius
ENSPSIG00000014796LSM5100100.000ENSFCAG00000000230LSM581100.000Felis_catus
ENSPSIG00000014796LSM5100100.000ENSFALG00000001892LSM589100.000Ficedula_albicollis
ENSPSIG00000014796LSM510068.919ENSFDAG00000008685-8668.919Fukomys_damarensis
ENSPSIG00000014796LSM5100100.000ENSFDAG00000008767LSM581100.000Fukomys_damarensis
ENSPSIG00000014796LSM510085.135ENSFHEG00000004011lsm58085.135Fundulus_heteroclitus
ENSPSIG00000014796LSM510097.297ENSGMOG00000018235lsm58297.297Gadus_morhua
ENSPSIG00000014796LSM5100100.000ENSGALG00000041625LSM581100.000Gallus_gallus
ENSPSIG00000014796LSM58196.667ENSGAFG00000016824lsm59796.667Gambusia_affinis
ENSPSIG00000014796LSM510097.297ENSGACG00000005528lsm58197.297Gasterosteus_aculeatus
ENSPSIG00000014796LSM5100100.000ENSGAGG00000015593LSM581100.000Gopherus_agassizii
ENSPSIG00000014796LSM5100100.000ENSGGOG00000043469LSM581100.000Gorilla_gorilla
ENSPSIG00000014796LSM510097.297ENSHBUG00000013773lsm58497.297Haplochromis_burtoni
ENSPSIG00000014796LSM5100100.000ENSHGLG00000011765LSM581100.000Heterocephalus_glaber_female
ENSPSIG00000014796LSM599100.000ENSHGLG00100015610LSM582100.000Heterocephalus_glaber_male
ENSPSIG00000014796LSM55890.698ENSHCOG00000008288lsm57390.698Hippocampus_comes
ENSPSIG00000014796LSM510097.297ENSIPUG00000021095LSM58197.297Ictalurus_punctatus
ENSPSIG00000014796LSM5100100.000ENSSTOG00000012662LSM581100.000Ictidomys_tridecemlineatus
ENSPSIG00000014796LSM510085.135ENSSTOG00000033886-8385.135Ictidomys_tridecemlineatus
ENSPSIG00000014796LSM58181.667ENSJJAG00000016144-7281.667Jaculus_jaculus
ENSPSIG00000014796LSM5100100.000ENSJJAG00000012145-81100.000Jaculus_jaculus
ENSPSIG00000014796LSM58693.750ENSJJAG00000004475-8193.750Jaculus_jaculus
ENSPSIG00000014796LSM510095.946ENSKMAG00000021861lsm58195.946Kryptolebias_marmoratus
ENSPSIG00000014796LSM59197.015ENSLBEG00000009235LSM55397.015Labrus_bergylta
ENSPSIG00000014796LSM55580.488ENSLBEG00000017379lsm56780.488Labrus_bergylta
ENSPSIG00000014796LSM510097.297ENSLACG00000022448LSM58197.297Latimeria_chalumnae
ENSPSIG00000014796LSM510097.297ENSLOCG00000012903lsm58197.297Lepisosteus_oculatus
ENSPSIG00000014796LSM59972.603ENSLAFG00000027938-7772.603Loxodonta_africana
ENSPSIG00000014796LSM5100100.000ENSLAFG00000029579LSM581100.000Loxodonta_africana
ENSPSIG00000014796LSM510097.297ENSMFAG00000030152-8197.297Macaca_fascicularis
ENSPSIG00000014796LSM5100100.000ENSMFAG00000038508LSM581100.000Macaca_fascicularis
ENSPSIG00000014796LSM55089.189ENSMMUG00000045129-5889.189Macaca_mulatta
ENSPSIG00000014796LSM510087.838ENSMMUG00000039822-8087.838Macaca_mulatta
ENSPSIG00000014796LSM510097.297ENSMMUG00000030131-8197.297Macaca_mulatta
ENSPSIG00000014796LSM510097.297ENSMNEG00000037935-8197.297Macaca_nemestrina
ENSPSIG00000014796LSM5100100.000ENSMNEG00000015331LSM597100.000Macaca_nemestrina
ENSPSIG00000014796LSM510086.486ENSMLEG00000034037-8186.486Mandrillus_leucophaeus
ENSPSIG00000014796LSM5100100.000ENSMLEG00000024945LSM581100.000Mandrillus_leucophaeus
ENSPSIG00000014796LSM510093.243ENSMAMG00000012869lsm58193.243Mastacembelus_armatus
ENSPSIG00000014796LSM510097.297ENSMZEG00005019554lsm58497.297Maylandia_zebra
ENSPSIG00000014796LSM5100100.000ENSMGAG00000012117LSM581100.000Meleagris_gallopavo
ENSPSIG00000014796LSM5100100.000ENSMAUG00000008132-81100.000Mesocricetus_auratus
ENSPSIG00000014796LSM5100100.000ENSMAUG00000012222Lsm581100.000Mesocricetus_auratus
ENSPSIG00000014796LSM5100100.000ENSMICG00000005353LSM581100.000Microcebus_murinus
ENSPSIG00000014796LSM58588.889ENSMICG00000033928-8288.889Microcebus_murinus
ENSPSIG00000014796LSM5100100.000ENSMOCG00000012018Lsm581100.000Microtus_ochrogaster
ENSPSIG00000014796LSM510097.297ENSMMOG00000004026lsm58597.297Mola_mola
ENSPSIG00000014796LSM581100.000ENSMODG00000013274-97100.000Monodelphis_domestica
ENSPSIG00000014796LSM58193.333ENSMALG00000010343lsm59793.333Monopterus_albus
ENSPSIG00000014796LSM5100100.000MGP_CAROLIEiJ_G0028421Lsm581100.000Mus_caroli
ENSPSIG00000014796LSM5100100.000ENSMUSG00000091625Lsm581100.000Mus_musculus
ENSPSIG00000014796LSM5100100.000MGP_PahariEiJ_G0022171Lsm581100.000Mus_pahari
ENSPSIG00000014796LSM5100100.000MGP_SPRETEiJ_G0029423Lsm581100.000Mus_spretus
ENSPSIG00000014796LSM5100100.000ENSMLUG00000017028LSM581100.000Myotis_lucifugus
ENSPSIG00000014796LSM510086.842ENSNGAG00000017707-8086.842Nannospalax_galili
ENSPSIG00000014796LSM510075.676ENSNGAG00000022569-7775.676Nannospalax_galili
ENSPSIG00000014796LSM5100100.000ENSNGAG00000024142Lsm581100.000Nannospalax_galili
ENSPSIG00000014796LSM57496.364ENSNBRG00000011386lsm57396.364Neolamprologus_brichardi
ENSPSIG00000014796LSM5100100.000ENSNLEG00000015268LSM581100.000Nomascus_leucogenys
ENSPSIG00000014796LSM599100.000ENSOPRG00000002443LSM597100.000Ochotona_princeps
ENSPSIG00000014796LSM5100100.000ENSODEG00000019072-81100.000Octodon_degus
ENSPSIG00000014796LSM5100100.000ENSODEG00000008258-81100.000Octodon_degus
ENSPSIG00000014796LSM59759.722ENSOANG00000014540-9659.722Ornithorhynchus_anatinus
ENSPSIG00000014796LSM5100100.000ENSOCUG00000029043LSM581100.000Oryctolagus_cuniculus
ENSPSIG00000014796LSM510097.297ENSORLG00020003019lsm57797.297Oryzias_latipes_hni
ENSPSIG00000014796LSM510097.297ENSORLG00015003338lsm58197.297Oryzias_latipes_hsok
ENSPSIG00000014796LSM510097.297ENSOMEG00000001078lsm58197.297Oryzias_melastigma
ENSPSIG00000014796LSM5100100.000ENSOGAG00000013892LSM581100.000Otolemur_garnettii
ENSPSIG00000014796LSM5100100.000ENSOARG00000006944LSM581100.000Ovis_aries
ENSPSIG00000014796LSM5100100.000ENSPPAG00000003697-81100.000Pan_paniscus
ENSPSIG00000014796LSM5100100.000ENSPPRG00000002550LSM581100.000Panthera_pardus
ENSPSIG00000014796LSM5100100.000ENSPTIG00000015604LSM581100.000Panthera_tigris_altaica
ENSPSIG00000014796LSM5100100.000ENSPTRG00000019057LSM581100.000Pan_troglodytes
ENSPSIG00000014796LSM510079.730ENSPTRG00000049488-8082.432Pan_troglodytes
ENSPSIG00000014796LSM5100100.000ENSPANG00000032179-81100.000Papio_anubis
ENSPSIG00000014796LSM510097.297ENSPANG00000033477-8197.297Papio_anubis
ENSPSIG00000014796LSM510087.838ENSPANG00000032538-8087.838Papio_anubis
ENSPSIG00000014796LSM510097.297ENSPKIG00000011910lsm58197.297Paramormyrops_kingsleyae
ENSPSIG00000014796LSM58196.667ENSPMGG00000011699lsm59796.667Periophthalmus_magnuspinnatus
ENSPSIG00000014796LSM510072.973ENSPEMG00000022375-7972.973Peromyscus_maniculatus_bairdii
ENSPSIG00000014796LSM510097.297ENSPFOG00000001433lsm58197.297Poecilia_formosa
ENSPSIG00000014796LSM510097.297ENSPLAG00000009665lsm58197.297Poecilia_latipinna
ENSPSIG00000014796LSM510097.297ENSPMEG00000022265lsm58197.297Poecilia_mexicana
ENSPSIG00000014796LSM58196.667ENSPREG00000022452lsm59796.667Poecilia_reticulata
ENSPSIG00000014796LSM510095.946ENSPPYG00000017661LSM58195.946Pongo_abelii
ENSPSIG00000014796LSM589100.000ENSPCAG00000013740LSM581100.000Procavia_capensis
ENSPSIG00000014796LSM5100100.000ENSPVAG00000009786LSM581100.000Pteropus_vampyrus
ENSPSIG00000014796LSM510097.297ENSPNYG00000022236lsm58497.297Pundamilia_nyererei
ENSPSIG00000014796LSM510097.297ENSPNAG00000001887lsm58197.297Pygocentrus_nattereri
ENSPSIG00000014796LSM5100100.000ENSRNOG00000042126Lsm581100.000Rattus_norvegicus
ENSPSIG00000014796LSM510097.333ENSRNOG00000027305AABR07065089.18297.333Rattus_norvegicus
ENSPSIG00000014796LSM5100100.000ENSRBIG00000030714-81100.000Rhinopithecus_bieti
ENSPSIG00000014796LSM5100100.000ENSRBIG00000027803-97100.000Rhinopithecus_bieti
ENSPSIG00000014796LSM5100100.000ENSRBIG00000030340-81100.000Rhinopithecus_bieti
ENSPSIG00000014796LSM510098.649ENSRBIG00000024431-8198.649Rhinopithecus_bieti
ENSPSIG00000014796LSM5100100.000ENSRROG00000004655-81100.000Rhinopithecus_roxellana
ENSPSIG00000014796LSM5100100.000ENSRROG00000042782-97100.000Rhinopithecus_roxellana
ENSPSIG00000014796LSM5100100.000ENSRROG00000023884-81100.000Rhinopithecus_roxellana
ENSPSIG00000014796LSM59750.649YER146W-8350.649Saccharomyces_cerevisiae
ENSPSIG00000014796LSM5100100.000ENSSBOG00000012312LSM581100.000Saimiri_boliviensis_boliviensis
ENSPSIG00000014796LSM58588.889ENSSBOG00000034794-7888.889Saimiri_boliviensis_boliviensis
ENSPSIG00000014796LSM599100.000ENSSBOG00000019124-80100.000Saimiri_boliviensis_boliviensis
ENSPSIG00000014796LSM510097.297ENSSFOG00015010099lsm58197.297Scleropages_formosus
ENSPSIG00000014796LSM55893.023ENSSMAG00000007895lsm57393.023Scophthalmus_maximus
ENSPSIG00000014796LSM58196.667ENSSDUG00000010762lsm59796.667Seriola_dumerili
ENSPSIG00000014796LSM510097.297ENSSLDG00000025242lsm58197.297Seriola_lalandi_dorsalis
ENSPSIG00000014796LSM59779.167ENSSLDG00000008014-8679.167Seriola_lalandi_dorsalis
ENSPSIG00000014796LSM510066.216ENSSARG00000003330LSM58166.216Sorex_araneus
ENSPSIG00000014796LSM510098.649ENSSPUG00000002690LSM59798.333Sphenodon_punctatus
ENSPSIG00000014796LSM55893.023ENSSPAG00000005435lsm57393.023Stegastes_partitus
ENSPSIG00000014796LSM56990.196ENSSSCG00000029661-7588.889Sus_scrofa
ENSPSIG00000014796LSM5100100.000ENSSSCG00000026064-81100.000Sus_scrofa
ENSPSIG00000014796LSM5100100.000ENSTGUG00000017539LSM581100.000Taeniopygia_guttata
ENSPSIG00000014796LSM59187.500ENSTRUG00000017749lsm55687.500Takifugu_rubripes
ENSPSIG00000014796LSM510095.946ENSTNIG00000008695lsm58495.946Tetraodon_nigroviridis
ENSPSIG00000014796LSM5100100.000ENSTBEG00000004876LSM581100.000Tupaia_belangeri
ENSPSIG00000014796LSM5100100.000ENSTTRG00000004237LSM581100.000Tursiops_truncatus
ENSPSIG00000014796LSM5100100.000ENSUMAG00000002625LSM553100.000Ursus_maritimus
ENSPSIG00000014796LSM5100100.000ENSVPAG00000009985LSM581100.000Vicugna_pacos
ENSPSIG00000014796LSM5100100.000ENSVVUG00000021311LSM581100.000Vulpes_vulpes
ENSPSIG00000014796LSM59198.507ENSXETG00000026465lsm58298.507Xenopus_tropicalis
ENSPSIG00000014796LSM58196.667ENSXCOG00000015348lsm59796.667Xiphophorus_couchianus
ENSPSIG00000014796LSM510097.297ENSXMAG00000029988lsm58197.297Xiphophorus_maculatus

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