EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000015158 (Gene tree)
Gene ID: -
Gene Symbol: UPF2
Alias: -
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 78828 bases
Position: chrJH207158.1:151700-230527
Accession: 17854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000017018	MIF4G	PF02854.19	9.5e-32	1	2
ENSPSIP00000017018	MIF4G	PF02854.19	9.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000017096	UPF2-201	2500	-	ENSPSIP00000017018	790 (aa)	-	K7G9Q7

Gene Model

Click here to download ENSPSIG00000015158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000015158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000015158	UPF2	95	91.247	ENSG00000151461	UPF2	59	91.247	Homo_sapiens
ENSPSIG00000015158	UPF2	95	77.207	ENSAPOG00000015837	UPF2	60	77.339	Acanthochromis_polyacanthus
ENSPSIG00000015158	UPF2	95	92.563	ENSAMEG00000004586	UPF2	59	92.563	Ailuropoda_melanoleuca
ENSPSIG00000015158	UPF2	95	81.184	ENSACIG00000018078	UPF2	59	81.316	Amphilophus_citrinellus
ENSPSIG00000015158	UPF2	95	81.686	ENSAOCG00000016766	UPF2	60	81.818	Amphiprion_ocellaris
ENSPSIG00000015158	UPF2	95	81.818	ENSAPEG00000019084	UPF2	60	81.950	Amphiprion_percula
ENSPSIG00000015158	UPF2	95	81.555	ENSATEG00000021677	UPF2	59	81.686	Anabas_testudineus
ENSPSIG00000015158	UPF2	95	88.742	ENSAPLG00000010287	UPF2	50	96.367	Anas_platyrhynchos
ENSPSIG00000015158	UPF2	95	92.563	ENSACAG00000009259	UPF2	59	92.563	Anolis_carolinensis
ENSPSIG00000015158	UPF2	95	74.437	ENSANAG00000028451	UPF2	56	74.471	Aotus_nancymaae
ENSPSIG00000015158	UPF2	95	81.447	ENSACLG00000012696	UPF2	59	81.579	Astatotilapia_calliptera
ENSPSIG00000015158	UPF2	95	81.686	ENSAMXG00000013700	UPF2	59	81.686	Astyanax_mexicanus
ENSPSIG00000015158	UPF2	95	92.961	ENSBTAG00000000288	UPF2	62	92.961	Bos_taurus
ENSPSIG00000015158	UPF2	95	90.571	ENSCJAG00000020685	UPF2	60	90.571	Callithrix_jacchus
ENSPSIG00000015158	UPF2	95	92.563	ENSCAFG00000004839	UPF2	59	92.563	Canis_familiaris
ENSPSIG00000015158	UPF2	95	92.563	ENSCAFG00020005882	UPF2	73	92.297	Canis_lupus_dingo
ENSPSIG00000015158	UPF2	95	93.094	ENSCHIG00000020359	UPF2	59	93.094	Capra_hircus
ENSPSIG00000015158	UPF2	95	91.501	ENSTSYG00000000935	UPF2	61	91.501	Carlito_syrichta
ENSPSIG00000015158	UPF2	82	85.604	ENSCAPG00000016658	UPF2	53	85.070	Cavia_aperea
ENSPSIG00000015158	UPF2	94	88.740	ENSCPOG00000008809	UPF2	59	88.204	Cavia_porcellus
ENSPSIG00000015158	UPF2	93	89.510	ENSCCAG00000035991	UPF2	61	89.510	Cebus_capucinus
ENSPSIG00000015158	UPF2	95	91.512	ENSCATG00000032679	UPF2	60	91.512	Cercocebus_atys
ENSPSIG00000015158	UPF2	95	91.633	ENSCLAG00000011434	UPF2	59	91.102	Chinchilla_lanigera
ENSPSIG00000015158	UPF2	95	91.512	ENSCSAG00000013372	UPF2	59	91.512	Chlorocebus_sabaeus
ENSPSIG00000015158	UPF2	83	93.254	ENSCHOG00000000422	UPF2	52	93.254	Choloepus_hoffmanni
ENSPSIG00000015158	UPF2	95	96.016	ENSCPBG00000027823	UPF2	59	96.016	Chrysemys_picta_bellii
ENSPSIG00000015158	UPF2	95	91.379	ENSCANG00000040396	UPF2	61	91.379	Colobus_angolensis_palliatus
ENSPSIG00000015158	UPF2	95	92.563	ENSCGRG00001019347	Upf2	59	92.563	Cricetulus_griseus_chok1gshd
ENSPSIG00000015158	UPF2	95	92.563	ENSCGRG00000017993	Upf2	59	92.563	Cricetulus_griseus_crigri
ENSPSIG00000015158	UPF2	81	82.889	ENSCSEG00000003520	UPF2	50	81.960	Cynoglossus_semilaevis
ENSPSIG00000015158	UPF2	83	85.191	ENSCVAG00000006167	UPF2	51	85.891	Cyprinodon_variegatus
ENSPSIG00000015158	UPF2	95	92.563	ENSDNOG00000018160	UPF2	59	92.563	Dasypus_novemcinctus
ENSPSIG00000015158	UPF2	95	91.899	ENSDORG00000002478	Upf2	59	91.899	Dipodomys_ordii
ENSPSIG00000015158	UPF2	80	38.580	FBgn0029992	Upf2	52	38.602	Drosophila_melanogaster
ENSPSIG00000015158	UPF2	80	68.504	ENSEBUG00000012448	-	67	68.297	Eptatretus_burgeri
ENSPSIG00000015158	UPF2	95	91.368	ENSEASG00005019274	UPF2	64	88.579	Equus_asinus_asinus
ENSPSIG00000015158	UPF2	95	91.501	ENSECAG00000017022	UPF2	59	90.969	Equus_caballus
ENSPSIG00000015158	UPF2	92	78.680	ENSEEUG00000007819	UPF2	57	78.680	Erinaceus_europaeus
ENSPSIG00000015158	UPF2	95	79.632	ENSELUG00000012014	UPF2	59	80.552	Esox_lucius
ENSPSIG00000015158	UPF2	95	92.829	ENSFCAG00000005785	UPF2	59	92.829	Felis_catus
ENSPSIG00000015158	UPF2	98	93.135	ENSFALG00000001889	UPF2	59	93.135	Ficedula_albicollis
ENSPSIG00000015158	UPF2	95	91.501	ENSFDAG00000014348	UPF2	59	90.969	Fukomys_damarensis
ENSPSIG00000015158	UPF2	83	85.344	ENSFHEG00000009826	UPF2	51	86.047	Fundulus_heteroclitus
ENSPSIG00000015158	UPF2	81	83.568	ENSGMOG00000005557	UPF2	60	79.659	Gadus_morhua
ENSPSIG00000015158	UPF2	95	94.960	ENSGALG00000033772	UPF2	59	94.960	Gallus_gallus
ENSPSIG00000015158	UPF2	95	80.105	ENSGAFG00000020867	UPF2	59	80.632	Gambusia_affinis
ENSPSIG00000015158	UPF2	80	84.977	ENSGACG00000001080	UPF2	59	80.577	Gasterosteus_aculeatus
ENSPSIG00000015158	UPF2	95	97.344	ENSGAGG00000002700	UPF2	59	97.344	Gopherus_agassizii
ENSPSIG00000015158	UPF2	95	91.247	ENSGGOG00000001479	UPF2	60	91.247	Gorilla_gorilla
ENSPSIG00000015158	UPF2	95	81.447	ENSHBUG00000004249	UPF2	59	81.579	Haplochromis_burtoni
ENSPSIG00000015158	UPF2	95	91.633	ENSHGLG00000015176	-	59	91.102	Heterocephalus_glaber_female
ENSPSIG00000015158	UPF2	95	78.353	ENSHGLG00000003822	-	59	77.556	Heterocephalus_glaber_female
ENSPSIG00000015158	UPF2	96	77.979	ENSHCOG00000004025	UPF2	59	78.796	Hippocampus_comes
ENSPSIG00000015158	UPF2	95	81.555	ENSIPUG00000015524	UPF2	59	81.950	Ictalurus_punctatus
ENSPSIG00000015158	UPF2	95	92.430	ENSSTOG00000013075	UPF2	59	92.430	Ictidomys_tridecemlineatus
ENSPSIG00000015158	UPF2	95	90.969	ENSJJAG00000004913	Upf2	59	90.969	Jaculus_jaculus
ENSPSIG00000015158	UPF2	82	85.626	ENSKMAG00000001071	UPF2	51	85.759	Kryptolebias_marmoratus
ENSPSIG00000015158	UPF2	95	81.842	ENSLBEG00000000728	-	70	81.974	Labrus_bergylta
ENSPSIG00000015158	UPF2	95	81.711	ENSLBEG00000016394	-	62	81.842	Labrus_bergylta
ENSPSIG00000015158	UPF2	95	83.489	ENSLACG00000015945	UPF2	59	83.489	Latimeria_chalumnae
ENSPSIG00000015158	UPF2	94	85.389	ENSLOCG00000015698	UPF2	59	85.389	Lepisosteus_oculatus
ENSPSIG00000015158	UPF2	95	91.379	ENSMFAG00000043865	UPF2	59	91.379	Macaca_fascicularis
ENSPSIG00000015158	UPF2	95	91.379	ENSMMUG00000008241	UPF2	59	91.379	Macaca_mulatta
ENSPSIG00000015158	UPF2	95	91.379	ENSMNEG00000008062	UPF2	74	91.379	Macaca_nemestrina
ENSPSIG00000015158	UPF2	95	91.512	ENSMLEG00000036120	UPF2	63	91.512	Mandrillus_leucophaeus
ENSPSIG00000015158	UPF2	95	80.896	ENSMAMG00000018276	UPF2	60	81.028	Mastacembelus_armatus
ENSPSIG00000015158	UPF2	95	81.447	ENSMZEG00005021595	UPF2	59	81.579	Maylandia_zebra
ENSPSIG00000015158	UPF2	95	93.369	ENSMGAG00000004573	UPF2	59	93.369	Meleagris_gallopavo
ENSPSIG00000015158	UPF2	95	88.845	ENSMAUG00000016512	Upf2	58	88.845	Mesocricetus_auratus
ENSPSIG00000015158	UPF2	95	91.368	ENSMICG00000001716	UPF2	62	91.368	Microcebus_murinus
ENSPSIG00000015158	UPF2	95	91.633	ENSMOCG00000008263	Upf2	59	91.235	Microtus_ochrogaster
ENSPSIG00000015158	UPF2	79	86.032	ENSMMOG00000006528	UPF2	61	76.711	Mola_mola
ENSPSIG00000015158	UPF2	95	93.625	ENSMODG00000016794	UPF2	59	93.625	Monodelphis_domestica
ENSPSIG00000015158	UPF2	95	79.051	ENSMALG00000002663	UPF2	60	81.686	Monopterus_albus
ENSPSIG00000015158	UPF2	95	91.633	MGP_CAROLIEiJ_G0023157	Upf2	59	91.633	Mus_caroli
ENSPSIG00000015158	UPF2	95	92.032	ENSMUSG00000043241	Upf2	59	92.032	Mus_musculus
ENSPSIG00000015158	UPF2	95	91.501	MGP_PahariEiJ_G0019217	Upf2	59	91.501	Mus_pahari
ENSPSIG00000015158	UPF2	95	92.430	MGP_SPRETEiJ_G0024075	Upf2	59	92.430	Mus_spretus
ENSPSIG00000015158	UPF2	95	92.297	ENSMPUG00000001064	UPF2	59	92.297	Mustela_putorius_furo
ENSPSIG00000015158	UPF2	95	90.489	ENSMLUG00000000228	UPF2	59	90.489	Myotis_lucifugus
ENSPSIG00000015158	UPF2	95	81.447	ENSNBRG00000013629	UPF2	59	81.579	Neolamprologus_brichardi
ENSPSIG00000015158	UPF2	95	91.247	ENSNLEG00000012058	UPF2	60	91.247	Nomascus_leucogenys
ENSPSIG00000015158	UPF2	95	91.633	ENSODEG00000001290	UPF2	59	91.102	Octodon_degus
ENSPSIG00000015158	UPF2	95	81.316	ENSONIG00000017991	UPF2	59	81.447	Oreochromis_niloticus
ENSPSIG00000015158	UPF2	95	90.789	ENSOCUG00000006230	UPF2	59	90.263	Oryctolagus_cuniculus
ENSPSIG00000015158	UPF2	95	80.978	ENSORLG00000017189	UPF2	59	81.638	Oryzias_latipes
ENSPSIG00000015158	UPF2	95	80.845	ENSORLG00020005969	UPF2	59	81.506	Oryzias_latipes_hni
ENSPSIG00000015158	UPF2	95	80.845	ENSORLG00015005713	UPF2	59	81.506	Oryzias_latipes_hsok
ENSPSIG00000015158	UPF2	95	81.638	ENSOMEG00000023420	UPF2	60	81.902	Oryzias_melastigma
ENSPSIG00000015158	UPF2	95	91.501	ENSOGAG00000005796	UPF2	59	91.501	Otolemur_garnettii
ENSPSIG00000015158	UPF2	95	93.094	ENSOARG00000014587	UPF2	59	93.094	Ovis_aries
ENSPSIG00000015158	UPF2	95	91.247	ENSPPAG00000037953	UPF2	60	91.247	Pan_paniscus
ENSPSIG00000015158	UPF2	95	92.829	ENSPPRG00000000690	UPF2	59	92.829	Panthera_pardus
ENSPSIG00000015158	UPF2	95	92.829	ENSPTIG00000008867	UPF2	59	92.829	Panthera_tigris_altaica
ENSPSIG00000015158	UPF2	95	91.247	ENSPTRG00000002291	UPF2	60	91.247	Pan_troglodytes
ENSPSIG00000015158	UPF2	95	91.512	ENSPANG00000023399	UPF2	60	91.512	Papio_anubis
ENSPSIG00000015158	UPF2	95	81.423	ENSPKIG00000025502	UPF2	59	79.578	Paramormyrops_kingsleyae
ENSPSIG00000015158	UPF2	95	79.735	ENSPMGG00000005259	UPF2	59	80.132	Periophthalmus_magnuspinnatus
ENSPSIG00000015158	UPF2	84	90.671	ENSPEMG00000015731	Upf2	57	90.671	Peromyscus_maniculatus_bairdii
ENSPSIG00000015158	UPF2	95	93.094	ENSPCIG00000006656	UPF2	59	93.094	Phascolarctos_cinereus
ENSPSIG00000015158	UPF2	95	80.764	ENSPFOG00000017118	UPF2	59	81.291	Poecilia_formosa
ENSPSIG00000015158	UPF2	95	80.764	ENSPLAG00000005094	UPF2	59	81.291	Poecilia_latipinna
ENSPSIG00000015158	UPF2	95	80.764	ENSPMEG00000017009	UPF2	59	81.291	Poecilia_mexicana
ENSPSIG00000015158	UPF2	95	81.159	ENSPREG00000021880	UPF2	59	81.555	Poecilia_reticulata
ENSPSIG00000015158	UPF2	95	91.235	ENSPCOG00000021656	UPF2	61	91.235	Propithecus_coquereli
ENSPSIG00000015158	UPF2	95	79.973	ENSPVAG00000017286	UPF2	59	79.973	Pteropus_vampyrus
ENSPSIG00000015158	UPF2	95	77.237	ENSPNYG00000017096	UPF2	58	77.368	Pundamilia_nyererei
ENSPSIG00000015158	UPF2	95	83.136	ENSPNAG00000009357	UPF2	60	83.136	Pygocentrus_nattereri
ENSPSIG00000015158	UPF2	95	88.609	ENSRNOG00000023593	Upf2	59	88.609	Rattus_norvegicus
ENSPSIG00000015158	UPF2	95	89.907	ENSRBIG00000037780	UPF2	59	89.907	Rhinopithecus_bieti
ENSPSIG00000015158	UPF2	95	91.379	ENSRROG00000043547	UPF2	60	91.379	Rhinopithecus_roxellana
ENSPSIG00000015158	UPF2	95	90.173	ENSSBOG00000020012	UPF2	61	90.173	Saimiri_boliviensis_boliviensis
ENSPSIG00000015158	UPF2	95	83.289	ENSSFOG00015023788	upf2	59	80.395	Scleropages_formosus
ENSPSIG00000015158	UPF2	79	82.726	ENSSMAG00000007637	UPF2	59	76.340	Scophthalmus_maximus
ENSPSIG00000015158	UPF2	96	77.865	ENSSDUG00000017244	UPF2	61	82.082	Seriola_dumerili
ENSPSIG00000015158	UPF2	95	78.421	ENSSLDG00000016866	UPF2	61	82.082	Seriola_lalandi_dorsalis
ENSPSIG00000015158	UPF2	95	89.907	ENSSARG00000008615	UPF2	59	89.907	Sorex_araneus
ENSPSIG00000015158	UPF2	95	89.907	ENSSPUG00000014544	UPF2	59	89.907	Sphenodon_punctatus
ENSPSIG00000015158	UPF2	95	94.422	ENSTGUG00000002163	-	59	94.422	Taeniopygia_guttata
ENSPSIG00000015158	UPF2	95	80.581	ENSTRUG00000007519	UPF2	59	80.261	Takifugu_rubripes
ENSPSIG00000015158	UPF2	95	77.939	ENSTNIG00000004453	UPF2	57	77.939	Tetraodon_nigroviridis
ENSPSIG00000015158	UPF2	95	91.235	ENSTBEG00000012679	UPF2	59	91.235	Tupaia_belangeri
ENSPSIG00000015158	UPF2	95	92.165	ENSTTRG00000016388	UPF2	59	91.766	Tursiops_truncatus
ENSPSIG00000015158	UPF2	95	92.563	ENSUAMG00000023560	UPF2	69	92.297	Ursus_americanus
ENSPSIG00000015158	UPF2	96	92.500	ENSUMAG00000012953	UPF2	57	92.500	Ursus_maritimus
ENSPSIG00000015158	UPF2	95	88.446	ENSVPAG00000006763	UPF2	59	88.446	Vicugna_pacos
ENSPSIG00000015158	UPF2	95	92.563	ENSVVUG00000006166	UPF2	63	92.563	Vulpes_vulpes
ENSPSIG00000015158	UPF2	95	82.166	ENSXETG00000033103	UPF2	50	90.852	Xenopus_tropicalis
ENSPSIG00000015158	UPF2	95	80.369	ENSXCOG00000011604	UPF2	59	81.028	Xiphophorus_couchianus
ENSPSIG00000015158	UPF2	95	80.632	ENSXMAG00000017209	UPF2	59	81.028	Xiphophorus_maculatus