EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000015216 (Gene tree)
Gene ID: 102459981
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 239-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 12982 bases
Position: chrJH204996.1:11340-24321
Accession: 102459981
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	1	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	2	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	3	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	4	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	5	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	6	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	7	8
ENSPSIP00000017083	zf-C2H2	PF00096.26	4.7e-58	8	8
ENSPSIP00000017083	zf-met	PF12874.7	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000017161	-	1346	XM_006110697	ENSPSIP00000017083	314 (aa)	XP_006110759	K7G9X2

Gene Model

Click here to download ENSPSIG00000015216's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000015216's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000015216	-	96	49.191	ENSPSIG00000002565	-	52	49.191
ENSPSIG00000015216	-	74	63.436	ENSPSIG00000002569	-	72	63.436
ENSPSIG00000015216	-	82	45.652	ENSPSIG00000012112	GFI1B	66	45.652
ENSPSIG00000015216	-	80	54.918	ENSPSIG00000006790	-	88	54.918
ENSPSIG00000015216	-	77	38.009	ENSPSIG00000013505	PRDM5	73	38.009
ENSPSIG00000015216	-	96	54.468	ENSPSIG00000015465	-	89	54.468
ENSPSIG00000015216	-	99	51.055	ENSPSIG00000000760	-	92	51.055
ENSPSIG00000015216	-	93	47.077	ENSPSIG00000000333	-	96	47.077
ENSPSIG00000015216	-	98	65.217	ENSPSIG00000009893	-	83	65.217
ENSPSIG00000015216	-	99	50.867	ENSPSIG00000016033	-	59	50.867
ENSPSIG00000015216	-	96	49.789	ENSPSIG00000010328	-	79	50.847
ENSPSIG00000015216	-	72	34.659	ENSPSIG00000016553	-	52	34.659
ENSPSIG00000015216	-	81	49.569	ENSPSIG00000005128	-	100	49.569
ENSPSIG00000015216	-	74	45.902	ENSPSIG00000006586	-	99	45.902
ENSPSIG00000015216	-	80	57.085	ENSPSIG00000010405	-	99	57.085
ENSPSIG00000015216	-	80	60.870	ENSPSIG00000012865	-	69	60.870
ENSPSIG00000015216	-	98	57.727	ENSPSIG00000013021	-	86	57.727
ENSPSIG00000015216	-	71	40.777	ENSPSIG00000003607	SNAI1	59	40.777
ENSPSIG00000015216	-	80	62.771	ENSPSIG00000004614	-	88	62.771
ENSPSIG00000015216	-	92	48.507	ENSPSIG00000003152	-	86	48.507
ENSPSIG00000015216	-	99	51.415	ENSPSIG00000004502	-	73	49.367
ENSPSIG00000015216	-	73	47.297	ENSPSIG00000000943	ZNF770	76	47.297
ENSPSIG00000015216	-	88	55.556	ENSPSIG00000012650	-	85	55.556
ENSPSIG00000015216	-	96	55.411	ENSPSIG00000010248	-	79	55.411
ENSPSIG00000015216	-	80	51.741	ENSPSIG00000008588	-	100	51.741
ENSPSIG00000015216	-	82	56.371	ENSPSIG00000016380	-	74	56.371
ENSPSIG00000015216	-	98	56.279	ENSPSIG00000005603	-	81	56.279
ENSPSIG00000015216	-	70	42.202	ENSPSIG00000011896	ZIC3	50	42.202
ENSPSIG00000015216	-	75	31.414	ENSPSIG00000002538	ZNF521	65	30.876
ENSPSIG00000015216	-	96	41.739	ENSPSIG00000004262	SNAI3	77	41.739
ENSPSIG00000015216	-	78	57.005	ENSPSIG00000001026	-	95	58.730
ENSPSIG00000015216	-	80	46.544	ENSPSIG00000000672	-	85	46.544
ENSPSIG00000015216	-	96	55.983	ENSPSIG00000009650	-	81	55.983
ENSPSIG00000015216	-	77	58.874	ENSPSIG00000016247	-	53	58.874
ENSPSIG00000015216	-	72	34.091	ENSPSIG00000011562	-	83	34.091
ENSPSIG00000015216	-	73	39.759	ENSPSIG00000004682	ZNF652	65	39.759
ENSPSIG00000015216	-	78	38.889	ENSPSIG00000005522	ZNF646	99	38.889
ENSPSIG00000015216	-	69	32.394	ENSPSIG00000011722	GTF3A	64	32.394
ENSPSIG00000015216	-	98	44.358	ENSPSIG00000009270	-	85	46.087
ENSPSIG00000015216	-	85	56.109	ENSPSIG00000005672	-	79	56.109
ENSPSIG00000015216	-	98	48.636	ENSPSIG00000000075	-	92	49.187
ENSPSIG00000015216	-	70	41.748	ENSPSIG00000016395	SNAI2	51	41.748
ENSPSIG00000015216	-	85	47.674	ENSPSIG00000008734	GFI1	56	47.674
ENSPSIG00000015216	-	92	55.745	ENSPSIG00000015459	-	81	55.745
ENSPSIG00000015216	-	81	58.454	ENSPSIG00000009603	-	99	58.454
ENSPSIG00000015216	-	85	41.700	ENSPSIG00000004303	ZNF319	95	41.700
ENSPSIG00000015216	-	76	48.333	ENSPSIG00000001739	-	99	48.333
ENSPSIG00000015216	-	82	64.729	ENSPSIG00000000522	-	100	63.636

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000015216	-	78	53.365	ENSAMXG00000029161	-	81	53.365	Astyanax_mexicanus
ENSPSIG00000015216	-	95	59.055	ENSCPBG00000001421	-	99	60.241	Chrysemys_picta_bellii
ENSPSIG00000015216	-	97	50.943	ENSCPBG00000021487	-	83	55.556	Chrysemys_picta_bellii
ENSPSIG00000015216	-	91	59.669	ENSCPBG00000016841	-	98	61.635	Chrysemys_picta_bellii
ENSPSIG00000015216	-	81	61.674	ENSCPBG00000004990	-	100	60.759	Chrysemys_picta_bellii
ENSPSIG00000015216	-	98	63.285	ENSCPBG00000004030	-	83	64.069	Chrysemys_picta_bellii
ENSPSIG00000015216	-	94	61.472	ENSCPBG00000021479	-	93	61.472	Chrysemys_picta_bellii
ENSPSIG00000015216	-	98	63.203	ENSCPBG00000012976	-	94	62.771	Chrysemys_picta_bellii
ENSPSIG00000015216	-	96	62.174	ENSCPBG00000001272	-	81	62.174	Chrysemys_picta_bellii
ENSPSIG00000015216	-	90	54.867	ENSGAGG00000001645	-	63	62.338	Gopherus_agassizii
ENSPSIG00000015216	-	100	62.771	ENSGAGG00000010833	-	93	62.771	Gopherus_agassizii
ENSPSIG00000015216	-	80	57.732	ENSGAGG00000016529	-	85	57.732	Gopherus_agassizii
ENSPSIG00000015216	-	98	63.877	ENSGAGG00000002214	-	89	63.877	Gopherus_agassizii
ENSPSIG00000015216	-	98	57.214	ENSGAGG00000012452	-	82	53.503	Gopherus_agassizii
ENSPSIG00000015216	-	96	54.589	ENSGAGG00000011487	-	82	63.636	Gopherus_agassizii
ENSPSIG00000015216	-	97	59.389	ENSGAGG00000002179	-	97	54.386	Gopherus_agassizii
ENSPSIG00000015216	-	80	63.948	ENSGAGG00000020134	-	56	63.948	Gopherus_agassizii
ENSPSIG00000015216	-	99	62.719	ENSGAGG00000009272	-	97	62.613	Gopherus_agassizii
ENSPSIG00000015216	-	100	50.156	ENSGAGG00000018445	-	100	52.074	Gopherus_agassizii
ENSPSIG00000015216	-	100	58.871	ENSGAGG00000014356	-	79	58.871	Gopherus_agassizii
ENSPSIG00000015216	-	96	58.130	ENSGAGG00000010324	-	80	58.130	Gopherus_agassizii
ENSPSIG00000015216	-	87	56.338	ENSTGUG00000018374	-	99	56.338	Taeniopygia_guttata
ENSPSIG00000015216	-	80	51.220	ENSTGUG00000015260	-	100	51.220	Taeniopygia_guttata
ENSPSIG00000015216	-	81	52.381	ENSTGUG00000016850	-	99	52.381	Taeniopygia_guttata
ENSPSIG00000015216	-	78	58.108	ENSTGUG00000018327	-	100	58.108	Taeniopygia_guttata
ENSPSIG00000015216	-	78	57.282	ENSTGUG00000018518	-	100	57.282	Taeniopygia_guttata
ENSPSIG00000015216	-	74	68.235	ENSTGUG00000018349	-	100	68.235	Taeniopygia_guttata
ENSPSIG00000015216	-	82	55.319	ENSTGUG00000014614	-	100	56.322	Taeniopygia_guttata
ENSPSIG00000015216	-	82	53.365	ENSTGUG00000014888	-	99	53.365	Taeniopygia_guttata
ENSPSIG00000015216	-	82	54.737	ENSTGUG00000013736	-	99	56.322	Taeniopygia_guttata
ENSPSIG00000015216	-	82	52.966	ENSTGUG00000016781	-	99	52.966	Taeniopygia_guttata
ENSPSIG00000015216	-	75	61.644	ENSTGUG00000018542	-	99	61.644	Taeniopygia_guttata
ENSPSIG00000015216	-	82	54.630	ENSTGUG00000016516	-	99	54.630	Taeniopygia_guttata
ENSPSIG00000015216	-	78	56.477	ENSTGUG00000018445	-	94	56.477	Taeniopygia_guttata