EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000015459 (Gene tree)
Gene ID: 102445691
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF26.1-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 5553 bases
Position: chrJH212194.1:2013-7565
Accession: 102445691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	1	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	2	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	3	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	4	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	5	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	6	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	7	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	8	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	9	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	10	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	11	12
ENSPSIP00000017370	zf-C2H2	PF00096.26	5.8e-70	12	12
ENSPSIP00000017370	zf-met	PF12874.7	2.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000017448	-	1827	-	ENSPSIP00000017370	608 (aa)	XP_014434668	K7GAQ9

Gene Model

Click here to download ENSPSIG00000015459's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000015459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000015459	-	98	53.894	ENSPSIG00000015465	-	99	53.894
ENSPSIG00000015459	-	80	52.261	ENSPSIG00000000522	-	100	52.261
ENSPSIG00000015459	-	70	39.059	ENSPSIG00000004303	ZNF319	93	39.059
ENSPSIG00000015459	-	72	37.255	ENSPSIG00000013505	PRDM5	91	37.255
ENSPSIG00000015459	-	63	40.206	ENSPSIG00000002913	OVOL1	55	40.206
ENSPSIG00000015459	-	89	49.405	ENSPSIG00000012650	-	91	49.405
ENSPSIG00000015459	-	74	48.571	ENSPSIG00000000672	-	94	48.571
ENSPSIG00000015459	-	100	58.491	ENSPSIG00000004502	-	94	58.140
ENSPSIG00000015459	-	83	56.420	ENSPSIG00000000333	-	99	56.420
ENSPSIG00000015459	-	96	55.034	ENSPSIG00000012865	-	98	46.205
ENSPSIG00000015459	-	97	48.297	ENSPSIG00000004614	-	99	49.034
ENSPSIG00000015459	-	92	45.810	ENSPSIG00000003152	-	99	46.454
ENSPSIG00000015459	-	73	64.638	ENSPSIG00000010405	-	99	64.638
ENSPSIG00000015459	-	92	50.413	ENSPSIG00000009270	-	88	50.413
ENSPSIG00000015459	-	71	45.181	ENSPSIG00000008734	GFI1	50	45.181
ENSPSIG00000015459	-	73	39.706	ENSPSIG00000012859	ZBTB41	60	39.706
ENSPSIG00000015459	-	73	52.174	ENSPSIG00000006790	-	93	52.174
ENSPSIG00000015459	-	73	43.868	ENSPSIG00000008588	-	100	45.084
ENSPSIG00000015459	-	98	59.912	ENSPSIG00000005672	-	99	59.912
ENSPSIG00000015459	-	69	44.785	ENSPSIG00000012112	GFI1B	51	44.785
ENSPSIG00000015459	-	70	39.552	ENSPSIG00000003607	SNAI1	59	39.552
ENSPSIG00000015459	-	81	55.745	ENSPSIG00000015216	-	92	55.745
ENSPSIG00000015459	-	72	35.238	ENSPSIG00000016553	-	60	35.238
ENSPSIG00000015459	-	54	34.266	ENSPSIG00000011722	GTF3A	72	34.266
ENSPSIG00000015459	-	73	62.000	ENSPSIG00000009603	-	99	62.000
ENSPSIG00000015459	-	70	40.845	ENSPSIG00000006586	-	99	41.471
ENSPSIG00000015459	-	78	53.067	ENSPSIG00000001026	-	98	53.067
ENSPSIG00000015459	-	76	40.568	ENSPSIG00000000760	-	95	40.568
ENSPSIG00000015459	-	70	31.250	ENSPSIG00000011562	-	92	34.167
ENSPSIG00000015459	-	95	54.825	ENSPSIG00000009893	-	99	54.825
ENSPSIG00000015459	-	69	41.606	ENSPSIG00000016395	SNAI2	67	41.606
ENSPSIG00000015459	-	84	50.971	ENSPSIG00000016033	-	58	50.971
ENSPSIG00000015459	-	79	41.045	ENSPSIG00000004262	SNAI3	77	41.045
ENSPSIG00000015459	-	100	56.376	ENSPSIG00000010248	-	96	58.233
ENSPSIG00000015459	-	70	47.059	ENSPSIG00000000943	ZNF770	99	47.059
ENSPSIG00000015459	-	69	43.820	ENSPSIG00000011896	ZIC3	59	43.820
ENSPSIG00000015459	-	92	55.508	ENSPSIG00000016247	-	53	55.508
ENSPSIG00000015459	-	100	52.995	ENSPSIG00000002565	-	83	48.333
ENSPSIG00000015459	-	88	55.303	ENSPSIG00000002569	-	95	55.303
ENSPSIG00000015459	-	99	58.432	ENSPSIG00000013021	-	100	58.432
ENSPSIG00000015459	-	100	65.428	ENSPSIG00000005603	-	99	64.311
ENSPSIG00000015459	-	64	50.951	ENSPSIG00000009650	-	70	50.186
ENSPSIG00000015459	-	70	45.116	ENSPSIG00000004647	-	57	45.116
ENSPSIG00000015459	-	73	47.368	ENSPSIG00000001739	-	99	47.368
ENSPSIG00000015459	-	77	33.903	ENSPSIG00000005522	ZNF646	99	33.903
ENSPSIG00000015459	-	73	43.719	ENSPSIG00000004682	ZNF652	67	42.233
ENSPSIG00000015459	-	96	50.237	ENSPSIG00000010328	-	96	50.237
ENSPSIG00000015459	-	84	57.288	ENSPSIG00000000075	-	92	52.652
ENSPSIG00000015459	-	73	37.097	ENSPSIG00000002538	ZNF521	73	33.482
ENSPSIG00000015459	-	99	52.011	ENSPSIG00000016380	-	99	52.011
ENSPSIG00000015459	-	73	52.448	ENSPSIG00000005128	-	100	51.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000015459	-	70	45.545	ENSACAG00000024898	-	98	45.545	Anolis_carolinensis
ENSPSIG00000015459	-	73	53.053	ENSACAG00000008664	-	66	55.556	Anolis_carolinensis
ENSPSIG00000015459	-	97	49.231	ENSACAG00000024956	-	99	49.231	Anolis_carolinensis
ENSPSIG00000015459	-	70	50.794	ENSAMXG00000042746	-	82	50.794	Astyanax_mexicanus
ENSPSIG00000015459	-	73	57.843	ENSAMXG00000038636	-	97	57.843	Astyanax_mexicanus
ENSPSIG00000015459	-	73	50.769	ENSAMXG00000010805	-	97	50.769	Astyanax_mexicanus
ENSPSIG00000015459	-	73	56.410	ENSAMXG00000032841	-	77	67.647	Astyanax_mexicanus
ENSPSIG00000015459	-	73	57.308	ENSAMXG00000036233	-	81	57.308	Astyanax_mexicanus
ENSPSIG00000015459	-	70	44.660	ENSAMXG00000035246	-	77	44.660	Astyanax_mexicanus
ENSPSIG00000015459	-	73	50.699	ENSAMXG00000038325	-	94	50.699	Astyanax_mexicanus
ENSPSIG00000015459	-	75	54.348	ENSAMXG00000042784	-	92	54.348	Astyanax_mexicanus
ENSPSIG00000015459	-	73	53.755	ENSAMXG00000034344	-	75	53.755	Astyanax_mexicanus
ENSPSIG00000015459	-	73	50.801	ENSAMXG00000034847	-	86	50.801	Astyanax_mexicanus
ENSPSIG00000015459	-	70	51.163	ENSAMXG00000038536	-	86	51.163	Astyanax_mexicanus
ENSPSIG00000015459	-	73	57.300	ENSAMXG00000025452	-	99	57.300	Astyanax_mexicanus
ENSPSIG00000015459	-	78	45.000	ENSBTAG00000038322	-	82	45.000	Bos_taurus
ENSPSIG00000015459	-	84	56.738	ENSCPBG00000026433	-	71	56.738	Chrysemys_picta_bellii
ENSPSIG00000015459	-	73	48.450	ENSCPBG00000001526	-	87	48.450	Chrysemys_picta_bellii
ENSPSIG00000015459	-	73	43.678	ENSCPBG00000013652	-	74	43.098	Chrysemys_picta_bellii
ENSPSIG00000015459	-	92	44.215	ENSCPBG00000008580	-	100	46.701	Chrysemys_picta_bellii
ENSPSIG00000015459	-	70	45.989	ENSCSAVG00000010960	-	99	45.989	Ciona_savignyi
ENSPSIG00000015459	-	73	45.902	ENSDNOG00000047495	-	78	45.902	Dasypus_novemcinctus
ENSPSIG00000015459	-	82	49.231	ENSEBUG00000012919	-	80	47.684	Eptatretus_burgeri
ENSPSIG00000015459	-	73	45.291	ENSEBUG00000011694	-	95	45.291	Eptatretus_burgeri
ENSPSIG00000015459	-	75	37.569	ENSEBUG00000013875	-	91	37.569	Eptatretus_burgeri
ENSPSIG00000015459	-	73	43.294	ENSEBUG00000008306	-	80	43.294	Eptatretus_burgeri
ENSPSIG00000015459	-	70	39.904	ENSEBUG00000005264	-	73	39.904	Eptatretus_burgeri
ENSPSIG00000015459	-	76	41.429	ENSEBUG00000002075	-	75	43.860	Eptatretus_burgeri
ENSPSIG00000015459	-	88	45.578	ENSEBUG00000015837	-	99	45.578	Eptatretus_burgeri
ENSPSIG00000015459	-	84	38.372	ENSEBUG00000014717	-	89	38.372	Eptatretus_burgeri
ENSPSIG00000015459	-	79	48.879	ENSEBUG00000011435	-	86	47.403	Eptatretus_burgeri
ENSPSIG00000015459	-	72	44.590	ENSEASG00005004469	-	92	44.590	Equus_asinus_asinus
ENSPSIG00000015459	-	72	39.617	ENSGMOG00000018506	-	100	39.617	Gadus_morhua
ENSPSIG00000015459	-	73	49.640	ENSGALG00000054325	-	98	49.640	Gallus_gallus
ENSPSIG00000015459	-	85	49.254	ENSGALG00000055127	-	89	49.254	Gallus_gallus
ENSPSIG00000015459	-	73	44.444	ENSGALG00000049609	-	58	42.955	Gallus_gallus
ENSPSIG00000015459	-	70	53.591	ENSGALG00000053507	-	78	53.591	Gallus_gallus
ENSPSIG00000015459	-	73	53.821	ENSGALG00000046336	-	99	53.821	Gallus_gallus
ENSPSIG00000015459	-	100	52.679	ENSGALG00000044069	-	85	52.679	Gallus_gallus
ENSPSIG00000015459	-	70	46.610	ENSGACG00000006283	-	95	46.610	Gasterosteus_aculeatus
ENSPSIG00000015459	-	79	51.986	ENSGAGG00000018885	-	73	51.986	Gopherus_agassizii
ENSPSIG00000015459	-	70	51.984	ENSGAGG00000011399	-	87	51.984	Gopherus_agassizii
ENSPSIG00000015459	-	76	45.747	ENSGAGG00000011366	-	99	45.747	Gopherus_agassizii
ENSPSIG00000015459	-	73	42.765	ENSHCOG00000018201	-	86	40.653	Hippocampus_comes
ENSPSIG00000015459	-	76	57.193	ENSIPUG00000015468	-	95	56.338	Ictalurus_punctatus
ENSPSIG00000015459	-	85	49.873	ENSIPUG00000021515	-	97	49.873	Ictalurus_punctatus
ENSPSIG00000015459	-	70	39.032	ENSIPUG00000012109	ZN12	51	39.032	Ictalurus_punctatus
ENSPSIG00000015459	-	73	42.739	ENSJJAG00000023633	Zfp672	92	42.222	Jaculus_jaculus
ENSPSIG00000015459	-	73	38.870	ENSLACG00000005264	-	97	38.870	Latimeria_chalumnae
ENSPSIG00000015459	-	96	48.421	ENSLACG00000022211	-	98	48.421	Latimeria_chalumnae
ENSPSIG00000015459	-	73	41.102	ENSLACG00000009005	-	100	42.623	Latimeria_chalumnae
ENSPSIG00000015459	-	70	41.969	ENSLOCG00000014210	-	50	39.267	Lepisosteus_oculatus
ENSPSIG00000015459	-	73	44.262	ENSLOCG00000017864	-	99	44.262	Lepisosteus_oculatus
ENSPSIG00000015459	-	70	52.050	ENSMGAG00000013362	-	100	52.050	Meleagris_gallopavo
ENSPSIG00000015459	-	70	41.406	ENSMAUG00000009945	Zfp672	89	42.857	Mesocricetus_auratus
ENSPSIG00000015459	-	73	46.377	ENSMMOG00000003923	-	89	46.377	Mola_mola
ENSPSIG00000015459	-	98	44.697	ENSMODG00000010532	-	99	44.697	Monodelphis_domestica
ENSPSIG00000015459	-	96	45.561	ENSMODG00000001880	-	99	45.561	Monodelphis_domestica
ENSPSIG00000015459	-	74	40.741	MGP_CAROLIEiJ_G0016391	Zfp672	93	52.632	Mus_caroli
ENSPSIG00000015459	-	98	50.855	MGP_CAROLIEiJ_G0030502	-	96	50.855	Mus_caroli
ENSPSIG00000015459	-	74	40.816	ENSMUSG00000049755	Zfp672	92	52.632	Mus_musculus
ENSPSIG00000015459	-	96	50.144	ENSMUSG00000030823	9130019O22Rik	90	50.144	Mus_musculus
ENSPSIG00000015459	-	75	49.187	MGP_SPRETEiJ_G0031613	-	84	49.187	Mus_spretus
ENSPSIG00000015459	-	74	41.730	MGP_SPRETEiJ_G0017233	Zfp672	82	53.333	Mus_spretus
ENSPSIG00000015459	-	97	45.277	ENSNGAG00000015777	Zim1	94	44.637	Nannospalax_galili
ENSPSIG00000015459	-	69	41.791	ENSNBRG00000007276	-	50	41.791	Neolamprologus_brichardi
ENSPSIG00000015459	-	73	41.732	ENSNBRG00000000708	-	89	44.290	Neolamprologus_brichardi
ENSPSIG00000015459	-	70	46.923	ENSORLG00020001922	-	89	42.593	Oryzias_latipes_hni
ENSPSIG00000015459	-	70	47.934	ENSOMEG00000001598	-	70	47.934	Oryzias_melastigma
ENSPSIG00000015459	-	73	41.480	ENSPREG00000002642	-	91	41.480	Poecilia_reticulata
ENSPSIG00000015459	-	69	50.000	ENSPNYG00000015486	-	60	50.000	Pundamilia_nyererei
ENSPSIG00000015459	-	73	55.612	ENSPNAG00000000088	-	92	55.612	Pygocentrus_nattereri
ENSPSIG00000015459	-	60	54.412	ENSPNAG00000018395	-	68	54.412	Pygocentrus_nattereri
ENSPSIG00000015459	-	73	43.662	ENSRNOG00000002713	Zfp672	90	43.411	Rattus_norvegicus
ENSPSIG00000015459	-	96	43.810	ENSSHAG00000018106	-	99	43.810	Sarcophilus_harrisii
ENSPSIG00000015459	-	73	52.214	ENSSFOG00015019818	-	81	45.192	Scleropages_formosus
ENSPSIG00000015459	-	76	44.286	ENSSMAG00000004252	-	87	43.103	Scophthalmus_maximus
ENSPSIG00000015459	-	76	55.602	ENSSPUG00000004366	-	67	55.602	Sphenodon_punctatus
ENSPSIG00000015459	-	70	51.634	ENSSPUG00000010016	-	88	50.361	Sphenodon_punctatus
ENSPSIG00000015459	-	70	50.000	ENSSPAG00000021653	-	91	50.000	Stegastes_partitus
ENSPSIG00000015459	-	73	51.938	ENSTGUG00000015210	-	100	51.938	Taeniopygia_guttata
ENSPSIG00000015459	-	73	56.481	ENSTGUG00000018351	-	100	56.481	Taeniopygia_guttata
ENSPSIG00000015459	-	95	41.445	ENSTRUG00000022066	-	92	44.271	Takifugu_rubripes
ENSPSIG00000015459	-	73	41.103	ENSXETG00000031192	-	100	41.103	Xenopus_tropicalis
ENSPSIG00000015459	-	73	55.769	ENSXCOG00000006553	-	84	55.769	Xiphophorus_couchianus
ENSPSIG00000015459	-	78	43.612	ENSXMAG00000026680	-	92	43.612	Xiphophorus_maculatus