EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000015690 (Gene tree)
Gene ID: 102450082
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 10386 bases
Position: chrJH208257.1:11236151-11246536
Accession: 102450082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000017687	UPF0086	PF01868.16	8.1e-27	1	1
ENSPSIP00000017684	UPF0086	PF01868.16	1.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000017763	POP4-201	997	XM_006121247	ENSPSIP00000017684	257 (aa)	XP_006121309	K7GBM3
ENSPSIT00000017766	POP4-202	4062	-	ENSPSIP00000017687	202 (aa)	-	K7GBM6

Gene Model

Click here to download ENSPSIG00000015690's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03008	Ribosome biogenesis in eukaryotes	KEGG
pss03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000015690's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000015690	POP4	100	78.713	ENSG00000105171	POP4	100	88.542	Homo_sapiens
ENSPSIG00000015690	POP4	98	65.500	ENSAMEG00000003172	-	94	64.593	Ailuropoda_melanoleuca
ENSPSIG00000015690	POP4	100	76.238	ENSAMEG00000018329	-	99	72.936	Ailuropoda_melanoleuca
ENSPSIG00000015690	POP4	100	62.871	ENSACIG00000008358	pop4	100	58.182	Amphilophus_citrinellus
ENSPSIG00000015690	POP4	99	62.376	ENSAOCG00000010116	pop4	98	61.386	Amphiprion_ocellaris
ENSPSIG00000015690	POP4	100	62.255	ENSAPEG00000002829	pop4	97	55.983	Amphiprion_percula
ENSPSIG00000015690	POP4	100	62.255	ENSATEG00000013028	pop4	100	57.658	Anabas_testudineus
ENSPSIG00000015690	POP4	100	84.158	ENSAPLG00000014051	POP4	98	84.653	Anas_platyrhynchos
ENSPSIG00000015690	POP4	100	79.208	ENSANAG00000020295	POP4	98	76.852	Aotus_nancymaae
ENSPSIG00000015690	POP4	100	63.235	ENSACLG00000000526	pop4	99	57.078	Astatotilapia_calliptera
ENSPSIG00000015690	POP4	100	64.356	ENSAMXG00000002899	pop4	98	63.721	Astyanax_mexicanus
ENSPSIG00000015690	POP4	100	79.208	ENSBTAG00000002223	POP4	100	75.909	Bos_taurus
ENSPSIG00000015690	POP4	76	30.128	WBGene00007603	C15C6.4	62	30.709	Caenorhabditis_elegans
ENSPSIG00000015690	POP4	100	77.340	ENSCJAG00000046750	POP4	98	80.791	Callithrix_jacchus
ENSPSIG00000015690	POP4	90	76.923	ENSCAFG00000007630	POP4	100	76.923	Canis_familiaris
ENSPSIG00000015690	POP4	98	79.798	ENSCHIG00000016743	POP4	100	74.545	Capra_hircus
ENSPSIG00000015690	POP4	100	74.752	ENSTSYG00000003488	POP4	100	71.818	Carlito_syrichta
ENSPSIG00000015690	POP4	98	54.315	ENSCAPG00000011105	POP4	100	52.535	Cavia_aperea
ENSPSIG00000015690	POP4	96	76.804	ENSCPOG00000002992	POP4	100	70.909	Cavia_porcellus
ENSPSIG00000015690	POP4	100	78.218	ENSCCAG00000020285	-	98	76.389	Cebus_capucinus
ENSPSIG00000015690	POP4	94	70.370	ENSCCAG00000034244	-	98	65.278	Cebus_capucinus
ENSPSIG00000015690	POP4	100	78.218	ENSCATG00000036022	POP4	100	87.500	Cercocebus_atys
ENSPSIG00000015690	POP4	98	75.758	ENSCLAG00000013162	POP4	99	72.477	Chinchilla_lanigera
ENSPSIG00000015690	POP4	100	78.713	ENSCSAG00000004868	POP4	100	77.064	Chlorocebus_sabaeus
ENSPSIG00000015690	POP4	98	57.071	ENSCHOG00000002071	POP4	100	54.378	Choloepus_hoffmanni
ENSPSIG00000015690	POP4	100	96.535	ENSCPBG00000016132	POP4	100	95.909	Chrysemys_picta_bellii
ENSPSIG00000015690	POP4	96	31.000	ENSCING00000023871	-	96	33.000	Ciona_intestinalis
ENSPSIG00000015690	POP4	100	78.713	ENSCANG00000005924	POP4	100	78.713	Colobus_angolensis_palliatus
ENSPSIG00000015690	POP4	98	75.758	ENSCGRG00001017185	Pop4	100	71.818	Cricetulus_griseus_chok1gshd
ENSPSIG00000015690	POP4	98	75.758	ENSCGRG00000008155	Pop4	100	71.818	Cricetulus_griseus_crigri
ENSPSIG00000015690	POP4	100	55.172	ENSCSEG00000002946	pop4	99	52.511	Cynoglossus_semilaevis
ENSPSIG00000015690	POP4	100	45.588	ENSCVAG00000018602	POP4	94	44.954	Cyprinodon_variegatus
ENSPSIG00000015690	POP4	100	69.307	ENSDARG00000101472	pop4	99	66.359	Danio_rerio
ENSPSIG00000015690	POP4	98	78.788	ENSDNOG00000047663	POP4	92	72.294	Dasypus_novemcinctus
ENSPSIG00000015690	POP4	76	73.203	ENSDORG00000008577	Pop4	100	68.605	Dipodomys_ordii
ENSPSIG00000015690	POP4	78	34.524	FBgn0035831	CG8038	71	37.415	Drosophila_melanogaster
ENSPSIG00000015690	POP4	99	63.500	ENSETEG00000003607	POP4	100	62.673	Echinops_telfairi
ENSPSIG00000015690	POP4	100	44.335	ENSEBUG00000008575	pop4	100	42.534	Eptatretus_burgeri
ENSPSIG00000015690	POP4	98	48.095	ENSEBUG00000010447	pop4	83	47.196	Eptatretus_burgeri
ENSPSIG00000015690	POP4	98	42.857	ENSEBUG00000004305	pop4	91	42.381	Eptatretus_burgeri
ENSPSIG00000015690	POP4	98	78.846	ENSECAG00000020206	POP4	78	78.846	Equus_caballus
ENSPSIG00000015690	POP4	98	59.391	ENSEEUG00000013109	POP4	99	59.391	Erinaceus_europaeus
ENSPSIG00000015690	POP4	99	65.829	ENSELUG00000019812	pop4	100	60.909	Esox_lucius
ENSPSIG00000015690	POP4	98	77.778	ENSFCAG00000001619	POP4	100	73.182	Felis_catus
ENSPSIG00000015690	POP4	100	80.693	ENSFALG00000000206	POP4	100	75.893	Ficedula_albicollis
ENSPSIG00000015690	POP4	98	76.263	ENSFDAG00000017859	POP4	100	71.818	Fukomys_damarensis
ENSPSIG00000015690	POP4	98	56.500	ENSFHEG00000012745	pop4	96	53.953	Fundulus_heteroclitus
ENSPSIG00000015690	POP4	99	62.687	ENSGMOG00000000335	pop4	99	62.189	Gadus_morhua
ENSPSIG00000015690	POP4	100	84.158	ENSGALG00000041972	POP4	93	81.448	Gallus_gallus
ENSPSIG00000015690	POP4	78	54.375	ENSGAFG00000003571	pop4	96	51.149	Gambusia_affinis
ENSPSIG00000015690	POP4	100	63.235	ENSGACG00000014510	pop4	93	69.186	Gasterosteus_aculeatus
ENSPSIG00000015690	POP4	100	94.554	ENSGAGG00000024544	POP4	78	95.392	Gopherus_agassizii
ENSPSIG00000015690	POP4	100	79.208	ENSGGOG00000038346	POP4	99	77.064	Gorilla_gorilla
ENSPSIG00000015690	POP4	100	62.255	ENSHBUG00000021821	pop4	99	56.422	Haplochromis_burtoni
ENSPSIG00000015690	POP4	98	75.758	ENSHGLG00000015798	POP4	99	72.477	Heterocephalus_glaber_female
ENSPSIG00000015690	POP4	98	75.758	ENSHGLG00100009737	POP4	99	72.350	Heterocephalus_glaber_male
ENSPSIG00000015690	POP4	100	60.488	ENSHCOG00000020937	pop4	99	57.466	Hippocampus_comes
ENSPSIG00000015690	POP4	100	61.881	ENSIPUG00000013652	pop4	100	60.909	Ictalurus_punctatus
ENSPSIG00000015690	POP4	100	75.248	ENSSTOG00000011016	POP4	100	72.273	Ictidomys_tridecemlineatus
ENSPSIG00000015690	POP4	99	77.387	ENSJJAG00000013376	Pop4	100	73.636	Jaculus_jaculus
ENSPSIG00000015690	POP4	100	63.235	ENSKMAG00000012250	pop4	98	61.009	Kryptolebias_marmoratus
ENSPSIG00000015690	POP4	100	57.353	ENSLBEG00000014139	pop4	99	54.545	Labrus_bergylta
ENSPSIG00000015690	POP4	100	57.353	ENSLBEG00000018846	-	99	54.545	Labrus_bergylta
ENSPSIG00000015690	POP4	100	72.277	ENSLACG00000008581	POP4	99	71.818	Latimeria_chalumnae
ENSPSIG00000015690	POP4	100	78.218	ENSLOCG00000005597	pop4	100	75.000	Lepisosteus_oculatus
ENSPSIG00000015690	POP4	100	75.743	ENSLAFG00000000084	POP4	99	74.194	Loxodonta_africana
ENSPSIG00000015690	POP4	100	78.713	ENSMFAG00000029606	POP4	100	75.909	Macaca_fascicularis
ENSPSIG00000015690	POP4	100	76.847	ENSMMUG00000017424	POP4	100	74.661	Macaca_mulatta
ENSPSIG00000015690	POP4	100	76.847	ENSMNEG00000031374	POP4	100	74.661	Macaca_nemestrina
ENSPSIG00000015690	POP4	100	78.713	ENSMLEG00000043454	POP4	100	75.909	Mandrillus_leucophaeus
ENSPSIG00000015690	POP4	100	63.235	ENSMAMG00000011716	pop4	100	57.848	Mastacembelus_armatus
ENSPSIG00000015690	POP4	100	63.235	ENSMZEG00005002360	pop4	99	57.078	Maylandia_zebra
ENSPSIG00000015690	POP4	100	84.653	ENSMGAG00000005337	POP4	98	82.648	Meleagris_gallopavo
ENSPSIG00000015690	POP4	98	74.747	ENSMAUG00000020110	Pop4	100	70.455	Mesocricetus_auratus
ENSPSIG00000015690	POP4	98	73.737	ENSMICG00000035730	POP4	98	69.725	Microcebus_murinus
ENSPSIG00000015690	POP4	100	61.386	ENSMMOG00000015321	pop4	100	57.014	Mola_mola
ENSPSIG00000015690	POP4	100	77.723	ENSMODG00000029406	POP4	99	72.926	Monodelphis_domestica
ENSPSIG00000015690	POP4	100	62.376	ENSMALG00000012571	pop4	99	60.092	Monopterus_albus
ENSPSIG00000015690	POP4	98	75.879	MGP_CAROLIEiJ_G0029600	Pop4	100	71.041	Mus_caroli
ENSPSIG00000015690	POP4	98	74.874	ENSMUSG00000030423	Pop4	100	70.136	Mus_musculus
ENSPSIG00000015690	POP4	98	75.758	MGP_SPRETEiJ_G0030699	Pop4	100	70.909	Mus_spretus
ENSPSIG00000015690	POP4	98	76.263	ENSMPUG00000008041	-	100	72.273	Mustela_putorius_furo
ENSPSIG00000015690	POP4	98	65.327	ENSMPUG00000008063	-	99	61.927	Mustela_putorius_furo
ENSPSIG00000015690	POP4	98	61.307	ENSMLUG00000010774	POP4	99	60.274	Myotis_lucifugus
ENSPSIG00000015690	POP4	62	82.400	ENSMEUG00000003636	-	100	82.400	Notamacropus_eugenii
ENSPSIG00000015690	POP4	98	76.768	ENSOPRG00000004736	POP4	99	76.768	Ochotona_princeps
ENSPSIG00000015690	POP4	98	75.253	ENSODEG00000013025	POP4	98	73.913	Octodon_degus
ENSPSIG00000015690	POP4	100	60.396	ENSONIG00000003458	pop4	99	55.856	Oreochromis_niloticus
ENSPSIG00000015690	POP4	98	78.283	ENSOCUG00000015974	POP4	100	73.182	Oryctolagus_cuniculus
ENSPSIG00000015690	POP4	100	59.804	ENSORLG00000020317	pop4	100	55.157	Oryzias_latipes
ENSPSIG00000015690	POP4	100	59.314	ENSORLG00015011624	pop4	99	55.455	Oryzias_latipes_hsok
ENSPSIG00000015690	POP4	100	60.294	ENSOMEG00000002538	pop4	98	57.078	Oryzias_melastigma
ENSPSIG00000015690	POP4	100	73.267	ENSOGAG00000011168	POP4	99	71.233	Otolemur_garnettii
ENSPSIG00000015690	POP4	98	79.798	ENSOARG00000004041	POP4	100	74.208	Ovis_aries
ENSPSIG00000015690	POP4	100	79.208	ENSPPAG00000040372	POP4	100	75.909	Pan_paniscus
ENSPSIG00000015690	POP4	98	77.778	ENSPPRG00000010502	POP4	100	73.182	Panthera_pardus
ENSPSIG00000015690	POP4	98	77.778	ENSPTIG00000016598	POP4	100	73.182	Panthera_tigris_altaica
ENSPSIG00000015690	POP4	100	79.208	ENSPTRG00000010779	POP4	100	75.909	Pan_troglodytes
ENSPSIG00000015690	POP4	100	78.713	ENSPANG00000008546	POP4	100	75.909	Papio_anubis
ENSPSIG00000015690	POP4	99	70.149	ENSPKIG00000004468	pop4	88	70.149	Paramormyrops_kingsleyae
ENSPSIG00000015690	POP4	99	58.537	ENSPMGG00000008608	pop4	98	59.024	Periophthalmus_magnuspinnatus
ENSPSIG00000015690	POP4	98	61.111	ENSPEMG00000019982	-	100	58.257	Peromyscus_maniculatus_bairdii
ENSPSIG00000015690	POP4	99	73.762	ENSPEMG00000014034	-	94	73.762	Peromyscus_maniculatus_bairdii
ENSPSIG00000015690	POP4	90	54.040	ENSPMAG00000006265	pop4	100	54.040	Petromyzon_marinus
ENSPSIG00000015690	POP4	99	79.397	ENSPCIG00000024738	POP4	94	76.037	Phascolarctos_cinereus
ENSPSIG00000015690	POP4	100	60.591	ENSPFOG00000000925	pop4	98	58.065	Poecilia_formosa
ENSPSIG00000015690	POP4	100	60.591	ENSPLAG00000003161	pop4	98	58.525	Poecilia_latipinna
ENSPSIG00000015690	POP4	100	60.591	ENSPMEG00000002475	pop4	98	58.065	Poecilia_mexicana
ENSPSIG00000015690	POP4	98	59.799	ENSPREG00000022403	pop4	92	57.143	Poecilia_reticulata
ENSPSIG00000015690	POP4	100	79.208	ENSPPYG00000009805	POP4	100	75.909	Pongo_abelii
ENSPSIG00000015690	POP4	99	73.134	ENSPCAG00000007737	POP4	99	69.725	Procavia_capensis
ENSPSIG00000015690	POP4	100	74.752	ENSPCOG00000018055	POP4	100	70.909	Propithecus_coquereli
ENSPSIG00000015690	POP4	98	75.758	ENSPVAG00000006069	POP4	100	71.818	Pteropus_vampyrus
ENSPSIG00000015690	POP4	100	63.235	ENSPNYG00000020038	pop4	99	57.339	Pundamilia_nyererei
ENSPSIG00000015690	POP4	98	64.975	ENSPNAG00000005591	pop4	99	61.751	Pygocentrus_nattereri
ENSPSIG00000015690	POP4	98	74.372	ENSRNOG00000027646	Pop4	100	70.136	Rattus_norvegicus
ENSPSIG00000015690	POP4	79	74.843	ENSRBIG00000044769	POP4	89	78.261	Rhinopithecus_bieti
ENSPSIG00000015690	POP4	100	78.218	ENSRROG00000028903	POP4	100	75.455	Rhinopithecus_roxellana
ENSPSIG00000015690	POP4	62	32.374	YBR257W	-	50	32.374	Saccharomyces_cerevisiae
ENSPSIG00000015690	POP4	100	78.218	ENSSBOG00000032445	POP4	100	75.455	Saimiri_boliviensis_boliviensis
ENSPSIG00000015690	POP4	100	78.713	ENSSHAG00000016888	POP4	99	76.606	Sarcophilus_harrisii
ENSPSIG00000015690	POP4	100	65.347	ENSSFOG00015014556	pop4	97	63.134	Scleropages_formosus
ENSPSIG00000015690	POP4	99	63.184	ENSSMAG00000016611	pop4	98	60.550	Scophthalmus_maximus
ENSPSIG00000015690	POP4	100	60.294	ENSSDUG00000019865	pop4	93	54.741	Seriola_dumerili
ENSPSIG00000015690	POP4	100	60.294	ENSSLDG00000001763	pop4	98	56.818	Seriola_lalandi_dorsalis
ENSPSIG00000015690	POP4	98	79.293	ENSSARG00000004748	POP4	100	75.576	Sorex_araneus
ENSPSIG00000015690	POP4	100	64.216	ENSSPAG00000014364	pop4	98	59.545	Stegastes_partitus
ENSPSIG00000015690	POP4	98	78.788	ENSSSCG00000002854	POP4	100	74.091	Sus_scrofa
ENSPSIG00000015690	POP4	99	84.500	ENSTGUG00000008953	POP4	100	84.500	Taeniopygia_guttata
ENSPSIG00000015690	POP4	100	59.606	ENSTNIG00000006401	pop4	100	60.099	Tetraodon_nigroviridis
ENSPSIG00000015690	POP4	98	77.387	ENSTBEG00000002194	POP4	100	72.398	Tupaia_belangeri
ENSPSIG00000015690	POP4	98	80.808	ENSTTRG00000005882	POP4	100	76.364	Tursiops_truncatus
ENSPSIG00000015690	POP4	100	75.743	ENSUAMG00000003049	-	100	71.364	Ursus_americanus
ENSPSIG00000015690	POP4	100	75.743	ENSUMAG00000007522	-	100	71.364	Ursus_maritimus
ENSPSIG00000015690	POP4	98	76.263	ENSVVUG00000016876	-	73	74.038	Vulpes_vulpes
ENSPSIG00000015690	POP4	100	73.762	ENSXETG00000017598	pop4	98	71.759	Xenopus_tropicalis
ENSPSIG00000015690	POP4	98	60.199	ENSXCOG00000017695	pop4	99	55.085	Xiphophorus_couchianus
ENSPSIG00000015690	POP4	98	60.199	ENSXMAG00000013862	pop4	99	55.085	Xiphophorus_maculatus