EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016064 (Gene tree)
Gene ID: 102444816
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 30244 bases
Position: chrJH207158.1:1411552-1441795
Accession: 102444816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018119	PRP4	PF08799.11	1.5e-13	1	1
ENSPSIP00000018119	Prp18	PF02840.15	1.9e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018204	-	2159	XM_006117114	ENSPSIP00000018119	342 (aa)	XP_006117176	K7GCV8

Gene Model

Click here to download ENSPSIG00000016064's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016064	-	100	92.982	ENSG00000165630	PRPF18	100	92.982	Homo_sapiens
ENSPSIG00000016064	-	100	85.088	ENSAPOG00000024177	prpf18	100	85.088	Acanthochromis_polyacanthus
ENSPSIG00000016064	-	100	92.398	ENSAMEG00000013591	-	100	92.398	Ailuropoda_melanoleuca
ENSPSIG00000016064	-	100	84.503	ENSACIG00000001186	prpf18	100	84.503	Amphilophus_citrinellus
ENSPSIG00000016064	-	98	84.776	ENSAOCG00000006572	prpf18	94	82.749	Amphiprion_ocellaris
ENSPSIG00000016064	-	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSPSIG00000016064	-	100	83.041	ENSATEG00000000303	prpf18	100	83.041	Anabas_testudineus
ENSPSIG00000016064	-	99	93.529	ENSAPLG00000003387	-	99	93.529	Anas_platyrhynchos
ENSPSIG00000016064	-	100	92.151	ENSACAG00000000818	-	100	92.151	Anolis_carolinensis
ENSPSIG00000016064	-	100	92.690	ENSANAG00000037445	-	100	92.690	Aotus_nancymaae
ENSPSIG00000016064	-	100	83.918	ENSACLG00000026296	prpf18	100	83.918	Astatotilapia_calliptera
ENSPSIG00000016064	-	100	84.286	ENSAMXG00000012848	prpf18	100	84.286	Astyanax_mexicanus
ENSPSIG00000016064	-	100	92.105	ENSBTAG00000017244	PRPF18	100	92.105	Bos_taurus
ENSPSIG00000016064	-	98	38.506	WBGene00009320	F32B6.3	97	38.506	Caenorhabditis_elegans
ENSPSIG00000016064	-	100	92.690	ENSCJAG00000009432	-	100	92.690	Callithrix_jacchus
ENSPSIG00000016064	-	100	92.398	ENSCAFG00000004735	-	100	92.398	Canis_familiaris
ENSPSIG00000016064	-	100	92.398	ENSCAFG00020007712	-	100	92.398	Canis_lupus_dingo
ENSPSIG00000016064	-	100	92.105	ENSCHIG00000000499	-	100	92.105	Capra_hircus
ENSPSIG00000016064	-	100	92.105	ENSTSYG00000003517	-	100	92.105	Carlito_syrichta
ENSPSIG00000016064	-	100	92.982	ENSCPOG00000021069	-	100	92.982	Cavia_porcellus
ENSPSIG00000016064	-	100	92.690	ENSCCAG00000036822	-	100	92.690	Cebus_capucinus
ENSPSIG00000016064	-	100	82.164	ENSCATG00000016633	-	100	82.164	Cercocebus_atys
ENSPSIG00000016064	-	100	92.398	ENSCLAG00000011770	-	100	92.398	Chinchilla_lanigera
ENSPSIG00000016064	-	100	90.598	ENSCSAG00000013109	-	100	90.598	Chlorocebus_sabaeus
ENSPSIG00000016064	-	100	93.258	ENSCPBG00000003100	-	100	93.258	Chrysemys_picta_bellii
ENSPSIG00000016064	-	99	56.012	ENSCING00000020481	-	97	54.335	Ciona_intestinalis
ENSPSIG00000016064	-	99	55.942	ENSCSAVG00000010546	-	99	55.780	Ciona_savignyi
ENSPSIG00000016064	-	100	92.690	ENSCANG00000034900	-	100	92.690	Colobus_angolensis_palliatus
ENSPSIG00000016064	-	100	92.982	ENSCGRG00001023665	Prpf18	100	92.982	Cricetulus_griseus_chok1gshd
ENSPSIG00000016064	-	100	92.982	ENSCGRG00000014690	Prpf18	100	92.982	Cricetulus_griseus_crigri
ENSPSIG00000016064	-	100	82.456	ENSCSEG00000005536	prpf18	99	82.456	Cynoglossus_semilaevis
ENSPSIG00000016064	-	100	83.626	ENSCVAG00000012401	prpf18	100	83.626	Cyprinodon_variegatus
ENSPSIG00000016064	-	100	85.380	ENSDARG00000058306	prpf18	100	85.380	Danio_rerio
ENSPSIG00000016064	-	100	92.690	ENSDNOG00000035607	-	100	92.690	Dasypus_novemcinctus
ENSPSIG00000016064	-	100	92.105	ENSDORG00000000858	Prpf18	100	92.105	Dipodomys_ordii
ENSPSIG00000016064	-	99	51.032	FBgn0027784	Prp18	98	51.032	Drosophila_melanogaster
ENSPSIG00000016064	-	100	82.749	ENSETEG00000015060	-	100	82.749	Echinops_telfairi
ENSPSIG00000016064	-	100	67.435	ENSEBUG00000016502	prpf18	99	66.571	Eptatretus_burgeri
ENSPSIG00000016064	-	100	92.690	ENSEASG00005019373	-	100	92.690	Equus_asinus_asinus
ENSPSIG00000016064	-	100	92.690	ENSECAG00000006997	PRPF18	100	92.690	Equus_caballus
ENSPSIG00000016064	-	92	58.228	ENSEEUG00000001171	-	100	58.228	Erinaceus_europaeus
ENSPSIG00000016064	-	100	81.633	ENSELUG00000022190	prpf18	100	81.633	Esox_lucius
ENSPSIG00000016064	-	100	92.398	ENSFCAG00000004436	-	100	92.398	Felis_catus
ENSPSIG00000016064	-	92	91.692	ENSFALG00000001912	-	97	91.692	Ficedula_albicollis
ENSPSIG00000016064	-	99	60.580	ENSFDAG00000010713	-	97	60.580	Fukomys_damarensis
ENSPSIG00000016064	-	93	94.984	ENSFDAG00000014026	-	99	94.984	Fukomys_damarensis
ENSPSIG00000016064	-	80	87.912	ENSFHEG00000020125	prpf18	98	88.015	Fundulus_heteroclitus
ENSPSIG00000016064	-	99	79.472	ENSGMOG00000012210	prpf18	99	79.472	Gadus_morhua
ENSPSIG00000016064	-	100	94.444	ENSGALG00000043593	-	100	94.444	Gallus_gallus
ENSPSIG00000016064	-	100	82.749	ENSGAFG00000006034	prpf18	100	82.749	Gambusia_affinis
ENSPSIG00000016064	-	100	80.409	ENSGACG00000012232	prpf18	100	80.409	Gasterosteus_aculeatus
ENSPSIG00000016064	-	100	96.491	ENSGAGG00000016878	-	100	96.491	Gopherus_agassizii
ENSPSIG00000016064	-	92	92.405	ENSGGOG00000025188	-	96	92.405	Gorilla_gorilla
ENSPSIG00000016064	-	100	83.918	ENSHBUG00000010264	prpf18	100	83.918	Haplochromis_burtoni
ENSPSIG00000016064	-	100	92.398	ENSHGLG00000018534	PRPF18	100	92.398	Heterocephalus_glaber_female
ENSPSIG00000016064	-	93	94.984	ENSHGLG00100012161	-	98	94.984	Heterocephalus_glaber_male
ENSPSIG00000016064	-	100	83.333	ENSHCOG00000015987	prpf18	100	83.333	Hippocampus_comes
ENSPSIG00000016064	-	100	81.586	ENSIPUG00000007432	prpf18	100	83.569	Ictalurus_punctatus
ENSPSIG00000016064	-	100	92.398	ENSSTOG00000008735	-	100	92.398	Ictidomys_tridecemlineatus
ENSPSIG00000016064	-	100	92.982	ENSJJAG00000024041	-	100	92.982	Jaculus_jaculus
ENSPSIG00000016064	-	100	67.638	ENSJJAG00000015191	-	100	67.638	Jaculus_jaculus
ENSPSIG00000016064	-	100	82.456	ENSKMAG00000012124	prpf18	100	82.456	Kryptolebias_marmoratus
ENSPSIG00000016064	-	97	81.845	ENSLBEG00000028466	prpf18	99	81.845	Labrus_bergylta
ENSPSIG00000016064	-	100	87.427	ENSLACG00000009885	prpf18	100	87.427	Latimeria_chalumnae
ENSPSIG00000016064	-	100	90.936	ENSLOCG00000016736	prpf18	100	90.936	Lepisosteus_oculatus
ENSPSIG00000016064	-	100	92.982	ENSLAFG00000007753	-	100	92.982	Loxodonta_africana
ENSPSIG00000016064	-	100	92.982	ENSMFAG00000000540	-	100	92.982	Macaca_fascicularis
ENSPSIG00000016064	-	100	92.982	ENSMMUG00000015071	PRPF18	100	92.982	Macaca_mulatta
ENSPSIG00000016064	-	100	92.982	ENSMNEG00000024679	-	100	92.982	Macaca_nemestrina
ENSPSIG00000016064	-	100	77.778	ENSMLEG00000031715	-	100	77.778	Mandrillus_leucophaeus
ENSPSIG00000016064	-	100	83.626	ENSMAMG00000006610	prpf18	100	83.626	Mastacembelus_armatus
ENSPSIG00000016064	-	100	83.918	ENSMZEG00005019392	prpf18	100	83.918	Maylandia_zebra
ENSPSIG00000016064	-	100	94.444	ENSMGAG00000005023	-	100	94.444	Meleagris_gallopavo
ENSPSIG00000016064	-	100	92.690	ENSMICG00000006572	-	100	92.690	Microcebus_murinus
ENSPSIG00000016064	-	100	92.982	ENSMOCG00000021468	Prpf18	100	92.982	Microtus_ochrogaster
ENSPSIG00000016064	-	100	83.918	ENSMMOG00000013012	prpf18	100	83.918	Mola_mola
ENSPSIG00000016064	-	96	87.870	ENSMODG00000016902	-	92	87.870	Monodelphis_domestica
ENSPSIG00000016064	-	100	81.579	ENSMODG00000024043	-	100	81.579	Monodelphis_domestica
ENSPSIG00000016064	-	100	77.259	ENSMALG00000005486	prpf18	100	77.551	Monopterus_albus
ENSPSIG00000016064	-	100	92.982	MGP_CAROLIEiJ_G0023143	Prpf18	100	98.630	Mus_caroli
ENSPSIG00000016064	-	100	92.690	ENSMUSG00000039449	Prpf18	100	98.630	Mus_musculus
ENSPSIG00000016064	-	100	93.275	MGP_PahariEiJ_G0019203	Prpf18	100	98.630	Mus_pahari
ENSPSIG00000016064	-	100	92.398	MGP_SPRETEiJ_G0024061	Prpf18	100	98.630	Mus_spretus
ENSPSIG00000016064	-	100	92.690	ENSMPUG00000000938	-	100	92.690	Mustela_putorius_furo
ENSPSIG00000016064	-	100	92.690	ENSMLUG00000009200	-	100	92.690	Myotis_lucifugus
ENSPSIG00000016064	-	67	90.000	ENSNGAG00000023550	-	82	90.000	Nannospalax_galili
ENSPSIG00000016064	-	100	92.398	ENSNGAG00000012500	-	100	92.398	Nannospalax_galili
ENSPSIG00000016064	-	100	83.918	ENSNBRG00000001778	prpf18	100	83.918	Neolamprologus_brichardi
ENSPSIG00000016064	-	100	92.982	ENSNLEG00000012186	-	100	92.982	Nomascus_leucogenys
ENSPSIG00000016064	-	100	64.912	ENSMEUG00000005032	-	100	64.912	Notamacropus_eugenii
ENSPSIG00000016064	-	77	73.962	ENSOPRG00000002153	-	100	73.962	Ochotona_princeps
ENSPSIG00000016064	-	100	92.105	ENSODEG00000003770	-	100	92.105	Octodon_degus
ENSPSIG00000016064	-	98	83.284	ENSONIG00000014854	prpf18	96	83.284	Oreochromis_niloticus
ENSPSIG00000016064	-	100	92.105	ENSOANG00000015404	-	100	92.105	Ornithorhynchus_anatinus
ENSPSIG00000016064	-	100	92.690	ENSOCUG00000027756	-	93	95.298	Oryctolagus_cuniculus
ENSPSIG00000016064	-	100	81.714	ENSORLG00000010293	prpf18	100	81.714	Oryzias_latipes
ENSPSIG00000016064	-	100	83.333	ENSORLG00020001530	prpf18	100	83.333	Oryzias_latipes_hni
ENSPSIG00000016064	-	100	83.041	ENSORLG00015013705	prpf18	100	83.041	Oryzias_latipes_hsok
ENSPSIG00000016064	-	100	84.795	ENSOMEG00000009167	prpf18	100	84.795	Oryzias_melastigma
ENSPSIG00000016064	-	100	92.105	ENSOGAG00000007294	-	100	92.105	Otolemur_garnettii
ENSPSIG00000016064	-	100	89.744	ENSOARG00000006243	-	100	89.744	Ovis_aries
ENSPSIG00000016064	-	100	92.982	ENSPPAG00000041959	-	100	92.982	Pan_paniscus
ENSPSIG00000016064	-	100	92.398	ENSPPRG00000000107	-	100	92.398	Panthera_pardus
ENSPSIG00000016064	-	100	92.690	ENSPTIG00000021094	-	100	92.690	Panthera_tigris_altaica
ENSPSIG00000016064	-	100	92.982	ENSPTRG00000002306	PRPF18	100	92.982	Pan_troglodytes
ENSPSIG00000016064	-	100	92.690	ENSPANG00000023346	-	100	92.690	Papio_anubis
ENSPSIG00000016064	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.906	Paramormyrops_kingsleyae
ENSPSIG00000016064	-	100	78.655	ENSPMGG00000016486	prpf18	100	78.655	Periophthalmus_magnuspinnatus
ENSPSIG00000016064	-	100	92.690	ENSPEMG00000013704	Prpf18	100	92.690	Peromyscus_maniculatus_bairdii
ENSPSIG00000016064	-	100	74.566	ENSPMAG00000000204	prpf18	100	74.566	Petromyzon_marinus
ENSPSIG00000016064	-	92	93.354	ENSPCIG00000012963	-	99	93.354	Phascolarctos_cinereus
ENSPSIG00000016064	-	100	81.143	ENSPFOG00000017611	prpf18	100	81.143	Poecilia_formosa
ENSPSIG00000016064	-	100	82.749	ENSPLAG00000000369	prpf18	100	82.749	Poecilia_latipinna
ENSPSIG00000016064	-	100	82.749	ENSPMEG00000005183	prpf18	100	82.749	Poecilia_mexicana
ENSPSIG00000016064	-	100	82.164	ENSPREG00000015232	prpf18	100	82.164	Poecilia_reticulata
ENSPSIG00000016064	-	100	92.982	ENSPPYG00000002101	PRPF18	100	92.982	Pongo_abelii
ENSPSIG00000016064	-	100	75.146	ENSPCAG00000010833	-	100	75.146	Procavia_capensis
ENSPSIG00000016064	-	100	86.842	ENSPCOG00000013057	-	100	86.842	Propithecus_coquereli
ENSPSIG00000016064	-	100	56.140	ENSPVAG00000002947	-	100	56.140	Pteropus_vampyrus
ENSPSIG00000016064	-	100	83.626	ENSPNYG00000003554	prpf18	100	83.626	Pundamilia_nyererei
ENSPSIG00000016064	-	100	84.615	ENSPNAG00000023151	prpf18	100	84.615	Pygocentrus_nattereri
ENSPSIG00000016064	-	100	92.398	ENSRNOG00000018396	Prpf18	100	92.398	Rattus_norvegicus
ENSPSIG00000016064	-	100	92.398	ENSRBIG00000028028	-	100	92.398	Rhinopithecus_bieti
ENSPSIG00000016064	-	100	92.690	ENSRROG00000040695	-	100	92.690	Rhinopithecus_roxellana
ENSPSIG00000016064	-	100	92.690	ENSSBOG00000034482	-	100	92.690	Saimiri_boliviensis_boliviensis
ENSPSIG00000016064	-	100	93.567	ENSSHAG00000016463	-	100	93.567	Sarcophilus_harrisii
ENSPSIG00000016064	-	100	75.731	ENSSHAG00000009669	-	100	75.731	Sarcophilus_harrisii
ENSPSIG00000016064	-	77	43.019	ENSSFOG00015021154	-	89	48.069	Scleropages_formosus
ENSPSIG00000016064	-	98	82.609	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSPSIG00000016064	-	100	81.579	ENSSMAG00000005308	prpf18	100	81.579	Scophthalmus_maximus
ENSPSIG00000016064	-	100	83.918	ENSSDUG00000015428	prpf18	100	83.918	Seriola_dumerili
ENSPSIG00000016064	-	100	83.918	ENSSLDG00000023989	prpf18	100	83.918	Seriola_lalandi_dorsalis
ENSPSIG00000016064	-	100	62.281	ENSSARG00000005307	-	100	62.281	Sorex_araneus
ENSPSIG00000016064	-	100	94.444	ENSSPUG00000002619	-	100	94.444	Sphenodon_punctatus
ENSPSIG00000016064	-	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSPSIG00000016064	-	100	92.398	ENSSSCG00000026354	-	100	92.398	Sus_scrofa
ENSPSIG00000016064	-	100	94.737	ENSTGUG00000002286	-	100	94.737	Taeniopygia_guttata
ENSPSIG00000016064	-	100	81.579	ENSTRUG00000011278	prpf18	100	81.579	Takifugu_rubripes
ENSPSIG00000016064	-	100	83.918	ENSTNIG00000000911	prpf18	100	83.918	Tetraodon_nigroviridis
ENSPSIG00000016064	-	79	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSPSIG00000016064	-	100	93.275	ENSTTRG00000011117	PRPF18	100	93.275	Tursiops_truncatus
ENSPSIG00000016064	-	91	95.177	ENSUAMG00000001815	-	93	95.177	Ursus_americanus
ENSPSIG00000016064	-	100	88.012	ENSUMAG00000012329	-	100	88.012	Ursus_maritimus
ENSPSIG00000016064	-	100	86.842	ENSVPAG00000011486	-	100	86.842	Vicugna_pacos
ENSPSIG00000016064	-	100	92.398	ENSVVUG00000005453	-	100	92.398	Vulpes_vulpes
ENSPSIG00000016064	-	100	81.159	ENSXETG00000024057	prpf18	100	81.159	Xenopus_tropicalis
ENSPSIG00000016064	-	100	82.267	ENSXCOG00000020414	prpf18	100	82.267	Xiphophorus_couchianus
ENSPSIG00000016064	-	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus