EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016084 (Gene tree)
Gene ID: 102456551
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 27
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 46708 bases
Position: chrJH210279.1:3857418-3904125
Accession: 102456551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018087	zf-CCCH	PF00642.24	0.00018	1	1
ENSPSIP00000018087	RRM_1	PF00076.22	4.7e-10	1	1
ENSPSIP00000018087	PWI	PF01480.17	6.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018172	-	3322	XM_006128556	ENSPSIP00000018087	1011 (aa)	XP_006128618	K7GCS6

Gene Model

Click here to download ENSPSIG00000016084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016084	-	66	67.667	ENSG00000091009	RBM27	100	72.527	Homo_sapiens
ENSPSIG00000016084	-	91	70.796	ENSAPOG00000000301	rbm27	86	50.146	Acanthochromis_polyacanthus
ENSPSIG00000016084	-	66	67.804	ENSAMEG00000017593	-	100	73.077	Ailuropoda_melanoleuca
ENSPSIG00000016084	-	56	55.932	ENSACIG00000014111	rbm27	55	55.085	Amphilophus_citrinellus
ENSPSIG00000016084	-	62	46.345	ENSAOCG00000009289	rbm26	56	46.833	Amphiprion_ocellaris
ENSPSIG00000016084	-	80	49.380	ENSAOCG00000016767	rbm27	54	54.300	Amphiprion_ocellaris
ENSPSIG00000016084	-	69	78.218	ENSAPEG00000017681	rbm27	57	54.017	Amphiprion_percula
ENSPSIG00000016084	-	62	46.130	ENSAPEG00000023027	rbm26	57	46.129	Amphiprion_percula
ENSPSIG00000016084	-	89	82.105	ENSATEG00000010385	rbm27	91	55.214	Anabas_testudineus
ENSPSIG00000016084	-	98	77.746	ENSAPLG00000009309	-	57	77.759	Anas_platyrhynchos
ENSPSIG00000016084	-	100	75.302	ENSACAG00000014177	-	100	74.373	Anolis_carolinensis
ENSPSIG00000016084	-	99	71.125	ENSANAG00000034039	-	100	76.278	Aotus_nancymaae
ENSPSIG00000016084	-	80	49.716	ENSACLG00000010782	rbm27	55	55.574	Astatotilapia_calliptera
ENSPSIG00000016084	-	87	45.927	ENSAMXG00000012398	rbm26	92	53.012	Astyanax_mexicanus
ENSPSIG00000016084	-	80	50.523	ENSAMXG00000029605	rbm27	53	55.846	Astyanax_mexicanus
ENSPSIG00000016084	-	100	76.522	ENSBTAG00000011642	RBM27	100	76.908	Bos_taurus
ENSPSIG00000016084	-	99	71.548	ENSCJAG00000021308	-	100	76.131	Callithrix_jacchus
ENSPSIG00000016084	-	66	67.804	ENSCAFG00000006456	-	100	72.985	Canis_familiaris
ENSPSIG00000016084	-	66	67.804	ENSCAFG00020024931	-	99	72.761	Canis_lupus_dingo
ENSPSIG00000016084	-	100	72.110	ENSCHIG00000009045	-	100	73.211	Capra_hircus
ENSPSIG00000016084	-	66	67.720	ENSTSYG00000004303	-	100	72.370	Carlito_syrichta
ENSPSIG00000016084	-	85	81.538	ENSCAPG00000007138	-	89	87.692	Cavia_aperea
ENSPSIG00000016084	-	87	81.538	ENSCPOG00000002498	-	97	87.692	Cavia_porcellus
ENSPSIG00000016084	-	98	72.139	ENSCCAG00000015866	-	100	72.263	Cebus_capucinus
ENSPSIG00000016084	-	98	71.764	ENSCATG00000035545	-	100	72.344	Cercocebus_atys
ENSPSIG00000016084	-	100	75.603	ENSCLAG00000016106	-	100	75.988	Chinchilla_lanigera
ENSPSIG00000016084	-	66	67.394	ENSCSAG00000012270	-	100	72.253	Chlorocebus_sabaeus
ENSPSIG00000016084	-	72	44.931	ENSCHOG00000000529	RBM26	74	45.970	Choloepus_hoffmanni
ENSPSIG00000016084	-	75	90.323	ENSCHOG00000002831	-	82	90.323	Choloepus_hoffmanni
ENSPSIG00000016084	-	100	96.640	ENSCPBG00000008390	-	100	96.640	Chrysemys_picta_bellii
ENSPSIG00000016084	-	99	70.199	ENSCANG00000040932	-	57	73.727	Colobus_angolensis_palliatus
ENSPSIG00000016084	-	98	86.120	ENSCGRG00001018200	Rbm27	71	86.120	Cricetulus_griseus_chok1gshd
ENSPSIG00000016084	-	66	72.328	ENSCGRG00000006403	Rbm27	100	75.221	Cricetulus_griseus_crigri
ENSPSIG00000016084	-	74	61.475	ENSCSEG00000016514	rbm26	65	51.852	Cynoglossus_semilaevis
ENSPSIG00000016084	-	85	80.000	ENSCVAG00000014585	rbm27	64	67.407	Cyprinodon_variegatus
ENSPSIG00000016084	-	71	64.912	ENSCVAG00000015295	rbm26	61	48.897	Cyprinodon_variegatus
ENSPSIG00000016084	-	56	58.219	ENSDARG00000060521	rbm27	53	58.204	Danio_rerio
ENSPSIG00000016084	-	66	68.076	ENSDNOG00000019753	-	100	73.260	Dasypus_novemcinctus
ENSPSIG00000016084	-	66	66.125	ENSDORG00000013392	Rbm27	100	74.792	Dipodomys_ordii
ENSPSIG00000016084	-	55	57.692	FBgn0002044	swm	55	57.692	Drosophila_melanogaster
ENSPSIG00000016084	-	58	44.286	ENSEBUG00000003376	rbm26	82	53.571	Eptatretus_burgeri
ENSPSIG00000016084	-	66	68.895	ENSEASG00005020588	-	100	71.481	Equus_asinus_asinus
ENSPSIG00000016084	-	100	69.659	ENSECAG00000000883	-	100	86.154	Equus_caballus
ENSPSIG00000016084	-	66	65.484	ENSEEUG00000010335	-	100	71.612	Erinaceus_europaeus
ENSPSIG00000016084	-	87	50.595	ENSEEUG00000012342	RBM26	93	43.932	Erinaceus_europaeus
ENSPSIG00000016084	-	88	77.108	ENSELUG00000003110	rbm26	87	46.512	Esox_lucius
ENSPSIG00000016084	-	59	55.397	ENSELUG00000023148	rbm27	96	51.591	Esox_lucius
ENSPSIG00000016084	-	100	76.425	ENSFCAG00000005792	-	100	76.812	Felis_catus
ENSPSIG00000016084	-	93	79.933	ENSFALG00000003228	-	98	69.317	Ficedula_albicollis
ENSPSIG00000016084	-	66	72.076	ENSFDAG00000017029	-	100	75.145	Fukomys_damarensis
ENSPSIG00000016084	-	66	78.218	ENSFHEG00000010494	rbm27	57	52.094	Fundulus_heteroclitus
ENSPSIG00000016084	-	57	48.034	ENSFHEG00000005102	rbm26	54	45.470	Fundulus_heteroclitus
ENSPSIG00000016084	-	86	71.698	ENSGMOG00000013610	rbm27	58	62.069	Gadus_morhua
ENSPSIG00000016084	-	52	54.545	ENSGMOG00000008594	rbm26	89	43.631	Gadus_morhua
ENSPSIG00000016084	-	100	85.756	ENSGALG00000007516	-	100	84.298	Gallus_gallus
ENSPSIG00000016084	-	94	46.809	ENSGACG00000015254	rbm26	95	44.433	Gasterosteus_aculeatus
ENSPSIG00000016084	-	98	89.625	ENSGAGG00000002126	-	99	88.780	Gopherus_agassizii
ENSPSIG00000016084	-	100	71.179	ENSGGOG00000013312	-	100	72.436	Gorilla_gorilla
ENSPSIG00000016084	-	69	78.218	ENSHBUG00000003077	rbm27	57	55.556	Haplochromis_burtoni
ENSPSIG00000016084	-	66	72.515	ENSHGLG00000004076	RBM27	100	75.676	Heterocephalus_glaber_female
ENSPSIG00000016084	-	66	72.515	ENSHGLG00100003022	-	100	75.492	Heterocephalus_glaber_male
ENSPSIG00000016084	-	67	92.208	ENSHCOG00000003684	rbm27	56	52.539	Hippocampus_comes
ENSPSIG00000016084	-	62	42.401	ENSHCOG00000000066	rbm26	58	41.812	Hippocampus_comes
ENSPSIG00000016084	-	60	57.282	ENSIPUG00000012280	rbm27	57	56.918	Ictalurus_punctatus
ENSPSIG00000016084	-	55	46.141	ENSIPUG00000004579	rbm26	54	45.533	Ictalurus_punctatus
ENSPSIG00000016084	-	66	73.599	ENSSTOG00000002378	-	100	76.374	Ictidomys_tridecemlineatus
ENSPSIG00000016084	-	100	68.161	ENSJJAG00000010911	Rbm27	100	69.118	Jaculus_jaculus
ENSPSIG00000016084	-	82	81.818	ENSKMAG00000009801	rbm27	87	52.203	Kryptolebias_marmoratus
ENSPSIG00000016084	-	90	80.198	ENSLBEG00000025151	rbm27	86	54.441	Labrus_bergylta
ENSPSIG00000016084	-	100	58.727	ENSLACG00000008729	rbm27	100	58.878	Latimeria_chalumnae
ENSPSIG00000016084	-	100	57.736	ENSLOCG00000010426	rbm27	99	57.844	Lepisosteus_oculatus
ENSPSIG00000016084	-	58	47.587	ENSLOCG00000004557	rbm26	57	45.827	Lepisosteus_oculatus
ENSPSIG00000016084	-	100	72.702	ENSLAFG00000022447	-	100	73.562	Loxodonta_africana
ENSPSIG00000016084	-	100	77.375	ENSMFAG00000042337	-	100	77.571	Macaca_fascicularis
ENSPSIG00000016084	-	100	72.007	ENSMMUG00000004476	RBM27	100	72.652	Macaca_mulatta
ENSPSIG00000016084	-	100	63.069	ENSMNEG00000037798	-	99	71.958	Macaca_nemestrina
ENSPSIG00000016084	-	99	69.432	ENSMLEG00000032857	-	100	72.344	Mandrillus_leucophaeus
ENSPSIG00000016084	-	80	49.488	ENSMAMG00000021382	rbm27	54	54.484	Mastacembelus_armatus
ENSPSIG00000016084	-	69	78.218	ENSMZEG00005002635	rbm27	57	55.726	Maylandia_zebra
ENSPSIG00000016084	-	99	80.820	ENSMGAG00000009467	-	96	82.566	Meleagris_gallopavo
ENSPSIG00000016084	-	68	77.049	ENSMGAG00000014927	RBM26	84	47.826	Meleagris_gallopavo
ENSPSIG00000016084	-	66	72.328	ENSMAUG00000007657	Rbm27	100	75.217	Mesocricetus_auratus
ENSPSIG00000016084	-	66	67.582	ENSMICG00000003262	-	100	72.844	Microcebus_murinus
ENSPSIG00000016084	-	100	74.615	ENSMOCG00000019479	Rbm27	100	75.072	Microtus_ochrogaster
ENSPSIG00000016084	-	91	52.707	ENSMMOG00000013809	rbm27	59	57.299	Mola_mola
ENSPSIG00000016084	-	94	48.943	ENSMMOG00000018170	rbm26	87	50.151	Mola_mola
ENSPSIG00000016084	-	66	71.351	ENSMODG00000010182	-	56	77.922	Monodelphis_domestica
ENSPSIG00000016084	-	87	72.727	ENSMALG00000018514	rbm27	87	52.951	Monopterus_albus
ENSPSIG00000016084	-	100	70.506	MGP_CAROLIEiJ_G0022226	Rbm27	100	74.374	Mus_caroli
ENSPSIG00000016084	-	100	70.841	ENSMUSG00000024491	Rbm27	100	74.374	Mus_musculus
ENSPSIG00000016084	-	100	71.308	MGP_PahariEiJ_G0018959	Rbm27	100	74.855	Mus_pahari
ENSPSIG00000016084	-	100	70.336	MGP_SPRETEiJ_G0023136	Rbm27	100	74.470	Mus_spretus
ENSPSIG00000016084	-	66	67.394	ENSMPUG00000007832	-	100	72.711	Mustela_putorius_furo
ENSPSIG00000016084	-	66	68.088	ENSMLUG00000000643	-	100	72.335	Myotis_lucifugus
ENSPSIG00000016084	-	66	72.353	ENSNGAG00000016316	Rbm27	100	74.470	Nannospalax_galili
ENSPSIG00000016084	-	77	50.786	ENSNBRG00000005739	rbm27	55	55.405	Neolamprologus_brichardi
ENSPSIG00000016084	-	99	71.628	ENSNLEG00000009886	-	100	72.619	Nomascus_leucogenys
ENSPSIG00000016084	-	76	88.636	ENSMEUG00000004031	-	73	88.095	Notamacropus_eugenii
ENSPSIG00000016084	-	91	69.079	ENSOPRG00000005424	-	81	72.552	Ochotona_princeps
ENSPSIG00000016084	-	100	70.994	ENSODEG00000005515	-	100	73.961	Octodon_degus
ENSPSIG00000016084	-	80	50.169	ENSONIG00000008506	rbm27	54	56.419	Oreochromis_niloticus
ENSPSIG00000016084	-	98	75.937	ENSOANG00000012563	-	100	77.098	Ornithorhynchus_anatinus
ENSPSIG00000016084	-	66	66.397	ENSOCUG00000000186	-	100	72.477	Oryctolagus_cuniculus
ENSPSIG00000016084	-	58	44.073	ENSORLG00000004434	rbm26	54	43.573	Oryzias_latipes
ENSPSIG00000016084	-	88	87.952	ENSORLG00000001645	rbm27	85	51.014	Oryzias_latipes
ENSPSIG00000016084	-	68	61.261	ENSORLG00020017599	rbm26	88	50.453	Oryzias_latipes_hni
ENSPSIG00000016084	-	88	87.952	ENSORLG00015003753	rbm27	85	50.725	Oryzias_latipes_hsok
ENSPSIG00000016084	-	74	60.000	ENSORLG00015015643	rbm26	88	50.453	Oryzias_latipes_hsok
ENSPSIG00000016084	-	80	48.373	ENSOMEG00000005785	rbm27	54	53.547	Oryzias_melastigma
ENSPSIG00000016084	-	66	66.985	ENSOGAG00000008758	-	100	72.253	Otolemur_garnettii
ENSPSIG00000016084	-	62	47.738	ENSOARG00000000372	RBM26	55	46.932	Ovis_aries
ENSPSIG00000016084	-	100	73.023	ENSOARG00000002840	-	100	74.326	Ovis_aries
ENSPSIG00000016084	-	62	46.512	ENSPPAG00000027293	RBM26	97	48.137	Pan_paniscus
ENSPSIG00000016084	-	100	71.179	ENSPPAG00000039646	-	100	76.278	Pan_paniscus
ENSPSIG00000016084	-	100	71.927	ENSPPRG00000021227	-	100	73.028	Panthera_pardus
ENSPSIG00000016084	-	100	71.927	ENSPTIG00000013051	-	100	73.028	Panthera_tigris_altaica
ENSPSIG00000016084	-	100	71.179	ENSPTRG00000017373	-	100	76.278	Pan_troglodytes
ENSPSIG00000016084	-	98	71.603	ENSPANG00000015776	-	99	72.259	Papio_anubis
ENSPSIG00000016084	-	100	45.308	ENSPKIG00000019670	rbm26	54	47.723	Paramormyrops_kingsleyae
ENSPSIG00000016084	-	100	43.605	ENSPKIG00000024548	-	53	55.985	Paramormyrops_kingsleyae
ENSPSIG00000016084	-	62	59.248	ENSPKIG00000006776	-	55	59.930	Paramormyrops_kingsleyae
ENSPSIG00000016084	-	54	51.730	ENSPMGG00000019541	rbm27	56	52.273	Periophthalmus_magnuspinnatus
ENSPSIG00000016084	-	66	70.571	ENSPEMG00000014312	Rbm27	100	74.446	Peromyscus_maniculatus_bairdii
ENSPSIG00000016084	-	58	45.455	ENSPCIG00000014681	RBM26	97	47.748	Phascolarctos_cinereus
ENSPSIG00000016084	-	86	84.091	ENSPCIG00000025797	-	99	77.851	Phascolarctos_cinereus
ENSPSIG00000016084	-	66	75.248	ENSPLAG00000000373	rbm27	57	53.767	Poecilia_latipinna
ENSPSIG00000016084	-	74	63.025	ENSPLAG00000022377	rbm26	87	47.447	Poecilia_latipinna
ENSPSIG00000016084	-	64	89.744	ENSPMEG00000018569	rbm27	57	54.110	Poecilia_mexicana
ENSPSIG00000016084	-	77	49.645	ENSPREG00000005827	rbm27	65	53.220	Poecilia_reticulata
ENSPSIG00000016084	-	91	63.025	ENSPREG00000021003	rbm26	87	47.447	Poecilia_reticulata
ENSPSIG00000016084	-	66	67.667	ENSPPYG00000015909	-	100	72.527	Pongo_abelii
ENSPSIG00000016084	-	78	76.190	ENSPCAG00000014786	-	73	77.656	Procavia_capensis
ENSPSIG00000016084	-	56	72.308	ENSPCOG00000022256	-	100	74.359	Propithecus_coquereli
ENSPSIG00000016084	-	61	48.673	ENSPVAG00000011666	RBM26	80	47.170	Pteropus_vampyrus
ENSPSIG00000016084	-	66	66.437	ENSPVAG00000005218	-	100	71.823	Pteropus_vampyrus
ENSPSIG00000016084	-	77	51.511	ENSPNYG00000015348	rbm27	55	55.405	Pundamilia_nyererei
ENSPSIG00000016084	-	56	56.042	ENSPNAG00000027218	rbm27	96	52.860	Pygocentrus_nattereri
ENSPSIG00000016084	-	94	48.378	ENSPNAG00000003024	rbm26	62	51.601	Pygocentrus_nattereri
ENSPSIG00000016084	-	66	65.223	ENSRNOG00000027250	Rbm27	100	70.906	Rattus_norvegicus
ENSPSIG00000016084	-	52	72.436	ENSRBIG00000036925	-	98	72.152	Rhinopithecus_bieti
ENSPSIG00000016084	-	99	70.849	ENSRROG00000043836	-	100	74.792	Rhinopithecus_roxellana
ENSPSIG00000016084	-	98	71.951	ENSSBOG00000034172	-	100	75.889	Saimiri_boliviensis_boliviensis
ENSPSIG00000016084	-	58	42.833	ENSSBOG00000031813	RBM26	98	45.197	Saimiri_boliviensis_boliviensis
ENSPSIG00000016084	-	66	66.938	ENSSHAG00000006988	-	60	72.638	Sarcophilus_harrisii
ENSPSIG00000016084	-	96	44.326	ENSSFOG00015003102	RBM26	58	45.514	Scleropages_formosus
ENSPSIG00000016084	-	98	40.077	ENSSFOG00015005311	rbm26	88	47.563	Scleropages_formosus
ENSPSIG00000016084	-	83	77.228	ENSSMAG00000004138	rbm27	57	54.252	Scophthalmus_maximus
ENSPSIG00000016084	-	66	48.974	ENSSMAG00000011760	rbm26	96	45.816	Scophthalmus_maximus
ENSPSIG00000016084	-	68	66.165	ENSSDUG00000021085	rbm27	57	54.181	Seriola_dumerili
ENSPSIG00000016084	-	65	77.228	ENSSLDG00000006922	rbm27	85	55.119	Seriola_lalandi_dorsalis
ENSPSIG00000016084	-	66	67.940	ENSSARG00000000313	-	100	70.019	Sorex_araneus
ENSPSIG00000016084	-	99	77.299	ENSSPUG00000013753	-	99	76.820	Sphenodon_punctatus
ENSPSIG00000016084	-	87	48.348	ENSSPAG00000004632	rbm26	88	47.590	Stegastes_partitus
ENSPSIG00000016084	-	88	80.233	ENSSPAG00000012000	rbm27	85	52.623	Stegastes_partitus
ENSPSIG00000016084	-	98	79.133	ENSTGUG00000000085	-	100	78.852	Taeniopygia_guttata
ENSPSIG00000016084	-	88	45.345	ENSTRUG00000017189	rbm26	88	49.118	Takifugu_rubripes
ENSPSIG00000016084	-	76	52.727	ENSTRUG00000004518	rbm27	59	51.587	Takifugu_rubripes
ENSPSIG00000016084	-	62	46.071	ENSTNIG00000009468	rbm26	54	45.394	Tetraodon_nigroviridis
ENSPSIG00000016084	-	77	47.425	ENSTNIG00000018215	rbm27	56	48.562	Tetraodon_nigroviridis
ENSPSIG00000016084	-	64	54.902	ENSTBEG00000003854	RBM26	61	54.902	Tupaia_belangeri
ENSPSIG00000016084	-	66	67.121	ENSTTRG00000016713	-	100	72.477	Tursiops_truncatus
ENSPSIG00000016084	-	88	70.722	ENSUAMG00000019864	-	93	71.224	Ursus_americanus
ENSPSIG00000016084	-	95	74.873	ENSUMAG00000010569	-	98	75.202	Ursus_maritimus
ENSPSIG00000016084	-	86	86.260	ENSVPAG00000000558	-	85	86.260	Vicugna_pacos
ENSPSIG00000016084	-	65	48.139	ENSVPAG00000009821	RBM26	66	49.351	Vicugna_pacos
ENSPSIG00000016084	-	100	76.374	ENSVVUG00000021131	-	100	76.760	Vulpes_vulpes
ENSPSIG00000016084	-	100	65.082	ENSXETG00000002322	rbm27	99	64.985	Xenopus_tropicalis
ENSPSIG00000016084	-	61	46.719	ENSXETG00000017810	rbm26	96	46.591	Xenopus_tropicalis
ENSPSIG00000016084	-	72	67.347	ENSXCOG00000001827	rbm26	68	78.481	Xiphophorus_couchianus
ENSPSIG00000016084	-	66	53.042	ENSXCOG00000005859	rbm27	55	78.788	Xiphophorus_couchianus