EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016181 (Gene tree)
Gene ID: 102453388
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 45569 bases
Position: chrJH224678.1:3645451-3691019
Accession: 102453388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018199	zf-CCCH	PF00642.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018284	RC3H1-201	3663	XM_006139352	ENSPSIP00000018199	1127 (aa)	XP_006139414	K7GD38

Gene Model

Click here to download ENSPSIG00000016181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016181	RC3H1	98	51.029	ENSPSIG00000005393	RC3H2	94	50.815

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016181	RC3H1	100	89.762	ENSG00000135870	RC3H1	100	89.497	Homo_sapiens
ENSPSIG00000016181	RC3H1	100	89.035	ENSAMEG00000015657	RC3H1	100	88.860	Ailuropoda_melanoleuca
ENSPSIG00000016181	RC3H1	100	89.538	ENSAPLG00000005341	RC3H1	100	89.538	Anas_platyrhynchos
ENSPSIG00000016181	RC3H1	100	86.201	ENSACAG00000015271	RC3H1	100	86.114	Anolis_carolinensis
ENSPSIG00000016181	RC3H1	100	88.782	ENSANAG00000036716	RC3H1	100	88.606	Aotus_nancymaae
ENSPSIG00000016181	RC3H1	100	89.488	ENSBTAG00000052708	RC3H1	100	89.311	Bos_taurus
ENSPSIG00000016181	RC3H1	100	88.782	ENSCJAG00000009106	RC3H1	100	88.606	Callithrix_jacchus
ENSPSIG00000016181	RC3H1	100	88.947	ENSCAFG00000014434	RC3H1	100	88.772	Canis_familiaris
ENSPSIG00000016181	RC3H1	100	88.869	ENSCAFG00020017112	RC3H1	99	97.303	Canis_lupus_dingo
ENSPSIG00000016181	RC3H1	100	89.920	ENSCHIG00000002873	RC3H1	100	89.744	Capra_hircus
ENSPSIG00000016181	RC3H1	99	87.368	ENSTSYG00000003913	RC3H1	99	87.193	Carlito_syrichta
ENSPSIG00000016181	RC3H1	100	85.175	ENSCPOG00000004349	RC3H1	100	84.912	Cavia_porcellus
ENSPSIG00000016181	RC3H1	100	87.379	ENSCCAG00000025652	RC3H1	100	87.204	Cebus_capucinus
ENSPSIG00000016181	RC3H1	100	89.308	ENSCATG00000033497	RC3H1	100	89.045	Cercocebus_atys
ENSPSIG00000016181	RC3H1	100	87.456	ENSCLAG00000011267	RC3H1	100	87.193	Chinchilla_lanigera
ENSPSIG00000016181	RC3H1	96	89.397	ENSCSAG00000011823	RC3H1	85	89.122	Chlorocebus_sabaeus
ENSPSIG00000016181	RC3H1	100	93.591	ENSCPBG00000014670	RC3H1	100	96.739	Chrysemys_picta_bellii
ENSPSIG00000016181	RC3H1	100	89.317	ENSCANG00000032120	RC3H1	100	89.054	Colobus_angolensis_palliatus
ENSPSIG00000016181	RC3H1	100	88.070	ENSCGRG00001020812	Rc3h1	100	87.895	Cricetulus_griseus_chok1gshd
ENSPSIG00000016181	RC3H1	100	88.070	ENSCGRG00000011952	Rc3h1	100	87.895	Cricetulus_griseus_crigri
ENSPSIG00000016181	RC3H1	55	83.917	ENSDNOG00000011494	RC3H1	99	84.713	Dasypus_novemcinctus
ENSPSIG00000016181	RC3H1	100	88.070	ENSDORG00000004855	Rc3h1	100	87.807	Dipodomys_ordii
ENSPSIG00000016181	RC3H1	82	90.250	ENSETEG00000012064	RC3H1	87	90.369	Echinops_telfairi
ENSPSIG00000016181	RC3H1	100	88.948	ENSEASG00005017000	RC3H1	100	88.771	Equus_asinus_asinus
ENSPSIG00000016181	RC3H1	100	88.771	ENSECAG00000021208	RC3H1	100	88.594	Equus_caballus
ENSPSIG00000016181	RC3H1	89	81.262	ENSEEUG00000014861	RC3H1	93	81.262	Erinaceus_europaeus
ENSPSIG00000016181	RC3H1	100	89.045	ENSFCAG00000014924	RC3H1	100	88.869	Felis_catus
ENSPSIG00000016181	RC3H1	100	88.646	ENSFALG00000002947	RC3H1	100	88.646	Ficedula_albicollis
ENSPSIG00000016181	RC3H1	100	88.070	ENSFDAG00000013303	RC3H1	100	87.807	Fukomys_damarensis
ENSPSIG00000016181	RC3H1	100	89.920	ENSGALG00000004587	RC3H1	100	89.832	Gallus_gallus
ENSPSIG00000016181	RC3H1	100	93.363	ENSGAGG00000018194	RC3H1	100	96.957	Gopherus_agassizii
ENSPSIG00000016181	RC3H1	100	83.231	ENSGGOG00000005735	RC3H1	100	82.969	Gorilla_gorilla
ENSPSIG00000016181	RC3H1	88	83.176	ENSHGLG00000004183	-	100	83.176	Heterocephalus_glaber_female
ENSPSIG00000016181	RC3H1	100	87.368	ENSHGLG00100008577	RC3H1	100	87.105	Heterocephalus_glaber_male
ENSPSIG00000016181	RC3H1	100	88.344	ENSSTOG00000016033	RC3H1	100	88.431	Ictidomys_tridecemlineatus
ENSPSIG00000016181	RC3H1	100	87.884	ENSJJAG00000018915	Rc3h1	100	87.709	Jaculus_jaculus
ENSPSIG00000016181	RC3H1	100	75.391	ENSLACG00000016186	RC3H1	100	79.245	Latimeria_chalumnae
ENSPSIG00000016181	RC3H1	97	89.050	ENSLAFG00000004367	RC3H1	100	89.140	Loxodonta_africana
ENSPSIG00000016181	RC3H1	100	89.220	ENSMFAG00000033725	RC3H1	100	88.957	Macaca_fascicularis
ENSPSIG00000016181	RC3H1	100	89.850	ENSMMUG00000000630	RC3H1	100	89.585	Macaca_mulatta
ENSPSIG00000016181	RC3H1	100	89.308	ENSMNEG00000035968	RC3H1	100	89.045	Macaca_nemestrina
ENSPSIG00000016181	RC3H1	100	89.308	ENSMLEG00000037455	RC3H1	100	89.045	Mandrillus_leucophaeus
ENSPSIG00000016181	RC3H1	100	81.344	ENSMAUG00000020864	Rc3h1	100	80.813	Mesocricetus_auratus
ENSPSIG00000016181	RC3H1	100	89.035	ENSMICG00000003000	RC3H1	100	88.860	Microcebus_murinus
ENSPSIG00000016181	RC3H1	93	86.265	ENSMOCG00000016587	Rc3h1	98	86.359	Microtus_ochrogaster
ENSPSIG00000016181	RC3H1	100	87.905	ENSMODG00000004289	RC3H1	100	87.818	Monodelphis_domestica
ENSPSIG00000016181	RC3H1	100	87.182	MGP_CAROLIEiJ_G0014756	Rc3h1	100	87.105	Mus_caroli
ENSPSIG00000016181	RC3H1	100	87.975	ENSMUSG00000040423	Rc3h1	100	87.710	Mus_musculus
ENSPSIG00000016181	RC3H1	100	87.632	MGP_PahariEiJ_G0027992	Rc3h1	100	87.368	Mus_pahari
ENSPSIG00000016181	RC3H1	100	87.975	MGP_SPRETEiJ_G0015563	Rc3h1	100	87.710	Mus_spretus
ENSPSIG00000016181	RC3H1	100	88.947	ENSMPUG00000004747	RC3H1	100	88.860	Mustela_putorius_furo
ENSPSIG00000016181	RC3H1	100	87.982	ENSMLUG00000011127	RC3H1	100	87.895	Myotis_lucifugus
ENSPSIG00000016181	RC3H1	100	88.684	ENSNGAG00000011135	Rc3h1	100	88.772	Nannospalax_galili
ENSPSIG00000016181	RC3H1	100	89.395	ENSNLEG00000015327	RC3H1	100	89.132	Nomascus_leucogenys
ENSPSIG00000016181	RC3H1	99	76.626	ENSOPRG00000013068	RC3H1	99	76.186	Ochotona_princeps
ENSPSIG00000016181	RC3H1	100	87.544	ENSODEG00000014185	RC3H1	100	87.281	Octodon_degus
ENSPSIG00000016181	RC3H1	100	88.184	ENSOANG00000000924	RC3H1	100	88.097	Ornithorhynchus_anatinus
ENSPSIG00000016181	RC3H1	99	88.612	ENSOCUG00000004930	RC3H1	98	88.523	Oryctolagus_cuniculus
ENSPSIG00000016181	RC3H1	100	82.137	ENSOGAG00000004044	RC3H1	100	82.049	Otolemur_garnettii
ENSPSIG00000016181	RC3H1	100	88.763	ENSOARG00000013011	RC3H1	100	88.589	Ovis_aries
ENSPSIG00000016181	RC3H1	100	89.142	ENSPPAG00000039253	RC3H1	100	88.879	Pan_paniscus
ENSPSIG00000016181	RC3H1	100	89.920	ENSPPRG00000009007	RC3H1	100	89.744	Panthera_pardus
ENSPSIG00000016181	RC3H1	100	88.472	ENSPTIG00000015326	RC3H1	100	88.559	Panthera_tigris_altaica
ENSPSIG00000016181	RC3H1	100	89.142	ENSPTRG00000001702	RC3H1	100	88.879	Pan_troglodytes
ENSPSIG00000016181	RC3H1	100	89.220	ENSPANG00000008886	RC3H1	100	88.957	Papio_anubis
ENSPSIG00000016181	RC3H1	100	87.632	ENSPEMG00000011966	Rc3h1	100	87.719	Peromyscus_maniculatus_bairdii
ENSPSIG00000016181	RC3H1	70	90.704	ENSPCIG00000002058	RC3H1	95	97.982	Phascolarctos_cinereus
ENSPSIG00000016181	RC3H1	100	86.328	ENSPPYG00000000490	RC3H1	98	89.962	Pongo_abelii
ENSPSIG00000016181	RC3H1	80	97.368	ENSPCAG00000010775	RC3H1	87	97.368	Procavia_capensis
ENSPSIG00000016181	RC3H1	83	86.744	ENSPCOG00000021795	RC3H1	96	86.850	Propithecus_coquereli
ENSPSIG00000016181	RC3H1	100	80.685	ENSPVAG00000007593	RC3H1	100	81.212	Pteropus_vampyrus
ENSPSIG00000016181	RC3H1	97	61.205	ENSPNAG00000023439	rc3h1a	95	91.216	Pygocentrus_nattereri
ENSPSIG00000016181	RC3H1	100	89.229	ENSRBIG00000037743	RC3H1	100	88.967	Rhinopithecus_bieti
ENSPSIG00000016181	RC3H1	100	89.132	ENSRROG00000036546	RC3H1	100	88.869	Rhinopithecus_roxellana
ENSPSIG00000016181	RC3H1	93	84.645	ENSSBOG00000010664	RC3H1	100	84.360	Saimiri_boliviensis_boliviensis
ENSPSIG00000016181	RC3H1	100	87.040	ENSSHAG00000007589	RC3H1	100	86.865	Sarcophilus_harrisii
ENSPSIG00000016181	RC3H1	87	86.036	ENSSARG00000004660	RC3H1	86	86.036	Sorex_araneus
ENSPSIG00000016181	RC3H1	100	86.140	ENSSPUG00000018472	RC3H1	100	86.053	Sphenodon_punctatus
ENSPSIG00000016181	RC3H1	100	90.274	ENSSSCG00000015498	RC3H1	100	90.363	Sus_scrofa
ENSPSIG00000016181	RC3H1	100	88.938	ENSTGUG00000004090	RC3H1	100	88.938	Taeniopygia_guttata
ENSPSIG00000016181	RC3H1	89	91.498	ENSTBEG00000005015	RC3H1	88	91.633	Tupaia_belangeri
ENSPSIG00000016181	RC3H1	100	88.801	ENSTTRG00000008572	RC3H1	100	88.626	Tursiops_truncatus
ENSPSIG00000016181	RC3H1	100	88.421	ENSUAMG00000019525	RC3H1	100	88.246	Ursus_americanus
ENSPSIG00000016181	RC3H1	100	88.957	ENSUMAG00000020087	RC3H1	100	88.782	Ursus_maritimus
ENSPSIG00000016181	RC3H1	92	97.748	ENSVPAG00000002591	RC3H1	92	97.748	Vicugna_pacos
ENSPSIG00000016181	RC3H1	100	88.724	ENSVVUG00000014201	RC3H1	93	96.018	Vulpes_vulpes
ENSPSIG00000016181	RC3H1	100	79.025	ENSXETG00000020030	rc3h1	100	78.329	Xenopus_tropicalis