EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 12497 bases
Position: chrJH211365.1:341712-354208
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	1	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	2	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	3	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	4	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	5	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	6	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	7	8
ENSPSIP00000018280	zf-C2H2	PF00096.26	1.2e-55	8	8
ENSPSIP00000018280	zf-met	PF12874.7	1.6e-12	1	2
ENSPSIP00000018280	zf-met	PF12874.7	1.6e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018366	-	1386	-	ENSPSIP00000018280	462 (aa)	-	K7GDB9

Gene Model

Click here to download ENSPSIG00000016247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016247	-	53	37.209	ENSPSIG00000002538	ZNF521	59	36.283
ENSPSIG00000016247	-	53	51.452	ENSPSIG00000009270	-	77	51.452
ENSPSIG00000016247	-	56	50.000	ENSPSIG00000003152	-	80	50.000
ENSPSIG00000016247	-	83	47.845	ENSPSIG00000004502	-	78	47.845
ENSPSIG00000016247	-	52	60.000	ENSPSIG00000006790	-	88	60.000
ENSPSIG00000016247	-	53	56.075	ENSPSIG00000015465	-	74	56.075
ENSPSIG00000016247	-	57	51.073	ENSPSIG00000008588	-	100	51.073
ENSPSIG00000016247	-	60	57.083	ENSPSIG00000010405	-	99	57.083
ENSPSIG00000016247	-	52	33.582	ENSPSIG00000011722	GTF3A	65	33.582
ENSPSIG00000016247	-	60	59.833	ENSPSIG00000004614	-	87	59.833
ENSPSIG00000016247	-	53	59.556	ENSPSIG00000009893	-	66	59.556
ENSPSIG00000016247	-	53	56.291	ENSPSIG00000000522	-	81	56.291
ENSPSIG00000016247	-	53	58.874	ENSPSIG00000015216	-	77	58.874
ENSPSIG00000016247	-	64	54.733	ENSPSIG00000009650	-	77	55.462
ENSPSIG00000016247	-	51	38.961	ENSPSIG00000006768	OVOL2	57	38.961
ENSPSIG00000016247	-	64	46.606	ENSPSIG00000000672	-	85	46.606
ENSPSIG00000016247	-	53	55.508	ENSPSIG00000015459	-	92	55.508
ENSPSIG00000016247	-	52	38.462	ENSPSIG00000016395	SNAI2	52	38.462
ENSPSIG00000016247	-	53	61.317	ENSPSIG00000012650	-	86	58.025
ENSPSIG00000016247	-	58	38.750	ENSPSIG00000016553	-	59	38.750
ENSPSIG00000016247	-	53	40.329	ENSPSIG00000004303	ZNF319	93	41.553
ENSPSIG00000016247	-	52	37.398	ENSPSIG00000003607	SNAI1	62	37.398
ENSPSIG00000016247	-	53	38.710	ENSPSIG00000004682	ZNF652	63	38.710
ENSPSIG00000016247	-	53	51.029	ENSPSIG00000010248	-	65	51.029
ENSPSIG00000016247	-	56	53.535	ENSPSIG00000001739	-	99	53.535
ENSPSIG00000016247	-	53	60.996	ENSPSIG00000012865	-	69	60.996
ENSPSIG00000016247	-	52	59.633	ENSPSIG00000002569	-	73	59.633
ENSPSIG00000016247	-	60	49.580	ENSPSIG00000005128	-	100	49.580
ENSPSIG00000016247	-	71	44.813	ENSPSIG00000000075	-	88	44.813
ENSPSIG00000016247	-	52	55.814	ENSPSIG00000001026	-	88	55.814
ENSPSIG00000016247	-	52	50.000	ENSPSIG00000005672	-	67	50.000
ENSPSIG00000016247	-	53	53.608	ENSPSIG00000006586	-	99	53.608
ENSPSIG00000016247	-	97	61.538	ENSPSIG00000016033	-	99	61.538
ENSPSIG00000016247	-	53	35.119	ENSPSIG00000011562	-	91	33.511
ENSPSIG00000016247	-	53	43.548	ENSPSIG00000011896	ZIC3	74	43.548
ENSPSIG00000016247	-	52	43.662	ENSPSIG00000000943	ZNF770	57	43.662
ENSPSIG00000016247	-	53	57.202	ENSPSIG00000016380	-	70	57.202
ENSPSIG00000016247	-	56	52.137	ENSPSIG00000000760	-	94	52.137
ENSPSIG00000016247	-	53	51.770	ENSPSIG00000005603	-	62	51.770
ENSPSIG00000016247	-	63	46.948	ENSPSIG00000000333	-	85	46.948
ENSPSIG00000016247	-	52	47.208	ENSPSIG00000004647	-	50	47.208
ENSPSIG00000016247	-	50	43.478	ENSPSIG00000005522	ZNF646	97	43.478
ENSPSIG00000016247	-	59	39.091	ENSPSIG00000002913	OVOL1	75	39.091
ENSPSIG00000016247	-	53	53.138	ENSPSIG00000009603	-	98	53.138
ENSPSIG00000016247	-	60	38.956	ENSPSIG00000013505	PRDM5	73	39.904
ENSPSIG00000016247	-	60	48.454	ENSPSIG00000010328	-	71	49.798
ENSPSIG00000016247	-	61	53.086	ENSPSIG00000013021	-	82	53.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016247	-	53	55.833	ENSAPLG00000012660	-	81	55.833	Anas_platyrhynchos
ENSPSIG00000016247	-	53	57.991	ENSAMXG00000038453	-	82	57.991	Astyanax_mexicanus
ENSPSIG00000016247	-	61	48.951	ENSAMXG00000033124	-	78	48.951	Astyanax_mexicanus
ENSPSIG00000016247	-	53	53.704	ENSAMXG00000043978	-	88	53.704	Astyanax_mexicanus
ENSPSIG00000016247	-	57	59.052	ENSAMXG00000011804	-	87	59.052	Astyanax_mexicanus
ENSPSIG00000016247	-	55	56.379	ENSAMXG00000041725	-	92	56.379	Astyanax_mexicanus
ENSPSIG00000016247	-	53	55.230	ENSAMXG00000039752	-	90	55.230	Astyanax_mexicanus
ENSPSIG00000016247	-	52	54.622	ENSAMXG00000004610	-	98	55.340	Astyanax_mexicanus
ENSPSIG00000016247	-	53	54.783	ENSAMXG00000003002	-	96	54.783	Astyanax_mexicanus
ENSPSIG00000016247	-	53	53.061	ENSAMXG00000019489	-	93	53.061	Astyanax_mexicanus
ENSPSIG00000016247	-	53	53.506	ENSAMXG00000031489	-	92	54.338	Astyanax_mexicanus
ENSPSIG00000016247	-	53	56.855	ENSAMXG00000037703	-	85	56.855	Astyanax_mexicanus
ENSPSIG00000016247	-	60	58.152	ENSAMXG00000040212	-	92	58.152	Astyanax_mexicanus
ENSPSIG00000016247	-	53	56.596	ENSAMXG00000026144	-	92	56.596	Astyanax_mexicanus
ENSPSIG00000016247	-	53	56.790	ENSAMXG00000001626	-	92	56.790	Astyanax_mexicanus
ENSPSIG00000016247	-	77	57.627	ENSAMXG00000026142	-	98	57.627	Astyanax_mexicanus
ENSPSIG00000016247	-	55	59.615	ENSAMXG00000029878	-	96	59.615	Astyanax_mexicanus
ENSPSIG00000016247	-	52	60.465	ENSAMXG00000025455	-	99	60.465	Astyanax_mexicanus
ENSPSIG00000016247	-	52	58.577	ENSAMXG00000035690	-	78	58.577	Astyanax_mexicanus
ENSPSIG00000016247	-	52	53.070	ENSAMXG00000037326	-	89	53.070	Astyanax_mexicanus
ENSPSIG00000016247	-	53	53.960	ENSAMXG00000032619	-	97	53.909	Astyanax_mexicanus
ENSPSIG00000016247	-	63	51.452	ENSAMXG00000037143	-	96	51.452	Astyanax_mexicanus
ENSPSIG00000016247	-	80	77.931	ENSCPBG00000002014	-	70	77.931	Chrysemys_picta_bellii
ENSPSIG00000016247	-	60	61.506	ENSEASG00005020341	-	99	61.506	Equus_asinus_asinus
ENSPSIG00000016247	-	55	59.072	ENSECAG00000039445	-	94	59.072	Equus_caballus
ENSPSIG00000016247	-	60	61.506	ENSECAG00000017293	-	97	61.506	Equus_caballus
ENSPSIG00000016247	-	56	60.251	ENSGAGG00000017986	-	90	58.798	Gopherus_agassizii
ENSPSIG00000016247	-	61	60.181	ENSGAGG00000015451	-	92	60.181	Gopherus_agassizii
ENSPSIG00000016247	-	53	64.881	ENSGAGG00000006683	-	84	64.881	Gopherus_agassizii
ENSPSIG00000016247	-	56	60.996	ENSGAGG00000006960	-	78	60.996	Gopherus_agassizii
ENSPSIG00000016247	-	72	57.806	ENSGAGG00000008773	-	83	62.241	Gopherus_agassizii
ENSPSIG00000016247	-	65	58.577	ENSGAGG00000019349	-	76	58.577	Gopherus_agassizii
ENSPSIG00000016247	-	58	58.120	ENSGAGG00000011574	-	79	58.120	Gopherus_agassizii
ENSPSIG00000016247	-	53	59.829	ENSGAGG00000009739	-	99	59.829	Gopherus_agassizii
ENSPSIG00000016247	-	58	63.636	ENSGAGG00000004740	-	86	60.251	Gopherus_agassizii
ENSPSIG00000016247	-	53	59.471	ENSGAGG00000000971	-	86	59.471	Gopherus_agassizii
ENSPSIG00000016247	-	53	56.838	ENSIPUG00000015177	-	66	56.838	Ictalurus_punctatus
ENSPSIG00000016247	-	53	64.634	ENSIPUG00000015400	-	99	64.634	Ictalurus_punctatus
ENSPSIG00000016247	-	53	54.393	ENSMPUG00000008437	-	87	54.393	Mustela_putorius_furo
ENSPSIG00000016247	-	53	60.606	ENSPTIG00000009259	-	99	60.606	Panthera_tigris_altaica
ENSPSIG00000016247	-	59	61.506	ENSPNAG00000005914	-	80	61.506	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	54.825	ENSPNAG00000021942	-	91	54.825	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	49.438	ENSPNAG00000029386	-	83	50.413	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	54.393	ENSPNAG00000012366	-	96	54.393	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	68.116	ENSPNAG00000018471	-	80	68.116	Pygocentrus_nattereri
ENSPSIG00000016247	-	64	58.685	ENSPNAG00000016025	-	90	58.685	Pygocentrus_nattereri
ENSPSIG00000016247	-	57	61.411	ENSPNAG00000003526	-	87	61.411	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	56.838	ENSPNAG00000012138	-	91	56.838	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	57.895	ENSPNAG00000003919	-	93	57.895	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	56.250	ENSPNAG00000002287	-	84	56.250	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	58.140	ENSPNAG00000007072	-	90	58.140	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	58.190	ENSPNAG00000008653	-	95	58.190	Pygocentrus_nattereri
ENSPSIG00000016247	-	62	60.294	ENSPNAG00000017479	-	85	60.294	Pygocentrus_nattereri
ENSPSIG00000016247	-	60	60.811	ENSPNAG00000016045	-	77	60.811	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	57.522	ENSPNAG00000028765	-	83	57.522	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	56.463	ENSPNAG00000000783	-	91	56.463	Pygocentrus_nattereri
ENSPSIG00000016247	-	53	54.955	ENSPNAG00000017455	-	78	54.955	Pygocentrus_nattereri
ENSPSIG00000016247	-	61	60.465	ENSPNAG00000018437	-	84	60.465	Pygocentrus_nattereri
ENSPSIG00000016247	-	58	54.106	ENSPNAG00000024704	-	96	54.106	Pygocentrus_nattereri
ENSPSIG00000016247	-	52	54.891	ENSUAMG00000027415	-	82	54.891	Ursus_americanus
ENSPSIG00000016247	-	63	56.904	ENSUAMG00000027384	-	87	56.485	Ursus_americanus
ENSPSIG00000016247	-	53	59.583	ENSVPAG00000002698	-	100	59.583	Vicugna_pacos