EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016295 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein Musashi homolog 1-like
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 11868 bases
Position: chrJH211953.1:3341-15208
Accession: 102447033
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018325	RRM_1	PF00076.22	1.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018411	-	3531	XM_006134163	ENSPSIP00000018325	123 (aa)	XP_006134225	K7GDG4

Gene Model

Click here to download ENSPSIG00000016295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016295	-	93	43.966	ENSPSIG00000004486	-	52	41.860
ENSPSIG00000016295	-	93	52.632	ENSPSIG00000016746	HNRNPDL	52	52.632
ENSPSIG00000016295	-	93	48.246	ENSPSIG00000010617	HNRNPAB	83	48.246
ENSPSIG00000016295	-	93	50.877	ENSPSIG00000017029	HNRNPD	64	50.877
ENSPSIG00000016295	-	93	42.241	ENSPSIG00000003011	HNRNPA3	57	42.241
ENSPSIG00000016295	-	93	43.966	ENSPSIG00000002659	HNRNPA2B1	50	43.966
ENSPSIG00000016295	-	95	40.336	ENSPSIG00000000035	-	64	41.228

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016295	-	93	93.939	ENSG00000135097	MSI1	52	93.939	Homo_sapiens
ENSPSIG00000016295	-	56	81.159	ENSACIG00000018210	zgc:110796	75	81.159	Amphilophus_citrinellus
ENSPSIG00000016295	-	95	83.761	ENSACIG00000017754	-	57	83.761	Amphilophus_citrinellus
ENSPSIG00000016295	-	95	84.615	ENSAOCG00000009031	-	51	84.615	Amphiprion_ocellaris
ENSPSIG00000016295	-	93	92.105	ENSANAG00000027901	-	52	92.105	Aotus_nancymaae
ENSPSIG00000016295	-	95	84.615	ENSACLG00000000117	-	51	85.965	Astatotilapia_calliptera
ENSPSIG00000016295	-	95	83.761	ENSACLG00000011230	MSI1	78	69.792	Astatotilapia_calliptera
ENSPSIG00000016295	-	93	93.860	ENSBTAG00000009800	MSI1	52	93.860	Bos_taurus
ENSPSIG00000016295	-	95	92.308	ENSCSAG00000002265	MSI1	58	92.308	Chlorocebus_sabaeus
ENSPSIG00000016295	-	95	84.615	ENSCSEG00000008352	-	51	85.965	Cynoglossus_semilaevis
ENSPSIG00000016295	-	92	81.416	ENSCSEG00000011032	MSI1	53	81.416	Cynoglossus_semilaevis
ENSPSIG00000016295	-	95	85.470	ENSCVAG00000009100	MSI1	51	86.842	Cyprinodon_variegatus
ENSPSIG00000016295	-	95	58.974	ENSCVAG00000017430	zgc:110796	82	58.974	Cyprinodon_variegatus
ENSPSIG00000016295	-	93	86.957	ENSDARG00000010710	msi1	52	83.168	Danio_rerio
ENSPSIG00000016295	-	56	82.609	ENSDARG00000041299	zgc:110796	73	82.609	Danio_rerio
ENSPSIG00000016295	-	95	84.615	ENSELUG00000023280	-	53	85.965	Esox_lucius
ENSPSIG00000016295	-	95	84.615	ENSFHEG00000003560	-	52	77.586	Fundulus_heteroclitus
ENSPSIG00000016295	-	95	84.615	ENSGAFG00000021522	MSI1	52	84.615	Gambusia_affinis
ENSPSIG00000016295	-	95	84.615	ENSGACG00000012679	MSI1	52	84.615	Gasterosteus_aculeatus
ENSPSIG00000016295	-	93	94.737	ENSGAGG00000016037	MSI1	51	94.737	Gopherus_agassizii
ENSPSIG00000016295	-	95	83.761	ENSHCOG00000012019	MSI1	55	85.088	Hippocampus_comes
ENSPSIG00000016295	-	95	82.857	ENSHCOG00000012067	-	77	82.857	Hippocampus_comes
ENSPSIG00000016295	-	95	82.906	ENSIPUG00000001976	msi1	52	80.952	Ictalurus_punctatus
ENSPSIG00000016295	-	93	91.228	ENSJJAG00000010643	-	51	91.228	Jaculus_jaculus
ENSPSIG00000016295	-	95	84.615	ENSKMAG00000019877	-	55	84.615	Kryptolebias_marmoratus
ENSPSIG00000016295	-	95	84.615	ENSLBEG00000008789	MSI1	51	85.965	Labrus_bergylta
ENSPSIG00000016295	-	72	70.787	ENSLOCG00000008618	zgc:110796	57	70.787	Lepisosteus_oculatus
ENSPSIG00000016295	-	95	83.761	ENSMAMG00000018426	-	52	83.761	Mastacembelus_armatus
ENSPSIG00000016295	-	95	84.615	ENSMZEG00005000340	-	51	85.965	Maylandia_zebra
ENSPSIG00000016295	-	95	91.045	ENSMGAG00000016518	-	70	91.045	Meleagris_gallopavo
ENSPSIG00000016295	-	95	92.308	ENSMAUG00000016820	Msi1	69	92.308	Mesocricetus_auratus
ENSPSIG00000016295	-	95	76.106	ENSMMOG00000012265	-	53	77.273	Mola_mola
ENSPSIG00000016295	-	95	84.615	ENSMMOG00000010492	MSI1	54	84.615	Mola_mola
ENSPSIG00000016295	-	95	83.761	ENSMALG00000001426	-	55	83.761	Monopterus_albus
ENSPSIG00000016295	-	95	84.615	ENSMALG00000017889	MSI1	50	84.615	Monopterus_albus
ENSPSIG00000016295	-	93	92.982	MGP_CAROLIEiJ_G0027626	Msi1	58	90.476	Mus_caroli
ENSPSIG00000016295	-	93	92.982	ENSMUSG00000054256	Msi1	58	90.476	Mus_musculus
ENSPSIG00000016295	-	93	92.982	MGP_PahariEiJ_G0024206	Msi1	58	90.476	Mus_pahari
ENSPSIG00000016295	-	93	92.982	MGP_SPRETEiJ_G0028624	Msi1	58	90.476	Mus_spretus
ENSPSIG00000016295	-	56	82.609	ENSNBRG00000018002	zgc:110796	73	82.609	Neolamprologus_brichardi
ENSPSIG00000016295	-	95	84.615	ENSNBRG00000000841	-	51	85.965	Neolamprologus_brichardi
ENSPSIG00000016295	-	95	83.761	ENSORLG00000029593	MSI1	52	83.761	Oryzias_latipes
ENSPSIG00000016295	-	95	83.761	ENSORLG00020008266	MSI1	53	83.761	Oryzias_latipes_hni
ENSPSIG00000016295	-	95	83.761	ENSORLG00015003916	MSI1	53	83.761	Oryzias_latipes_hsok
ENSPSIG00000016295	-	95	85.470	ENSOMEG00000017536	MSI1	52	85.470	Oryzias_melastigma
ENSPSIG00000016295	-	95	84.615	ENSOMEG00000002272	-	54	84.615	Oryzias_melastigma
ENSPSIG00000016295	-	95	85.470	ENSPKIG00000016497	MSI1	51	86.842	Paramormyrops_kingsleyae
ENSPSIG00000016295	-	95	85.470	ENSPMGG00000000514	MSI1	55	86.842	Periophthalmus_magnuspinnatus
ENSPSIG00000016295	-	95	85.470	ENSPLAG00000014025	-	54	85.470	Poecilia_latipinna
ENSPSIG00000016295	-	95	85.470	ENSPMEG00000012796	MSI1	51	86.842	Poecilia_mexicana
ENSPSIG00000016295	-	95	84.615	ENSPMEG00000007025	-	50	84.615	Poecilia_mexicana
ENSPSIG00000016295	-	59	71.233	ENSPREG00000020265	zgc:110796	63	71.233	Poecilia_reticulata
ENSPSIG00000016295	-	95	82.857	ENSPREG00000021416	-	51	78.070	Poecilia_reticulata
ENSPSIG00000016295	-	95	83.761	ENSPNAG00000019337	msi1	50	76.991	Pygocentrus_nattereri
ENSPSIG00000016295	-	95	85.470	ENSSFOG00015005350	MSI1	54	86.842	Scleropages_formosus
ENSPSIG00000016295	-	95	81.132	ENSSMAG00000018824	MSI1	51	82.524	Scophthalmus_maximus
ENSPSIG00000016295	-	95	84.615	ENSSLDG00000016832	MSI1	51	85.965	Seriola_lalandi_dorsalis
ENSPSIG00000016295	-	87	81.308	ENSSPAG00000015573	zgc:110796	55	81.308	Stegastes_partitus
ENSPSIG00000016295	-	95	83.761	ENSSPAG00000013098	-	51	85.088	Stegastes_partitus
ENSPSIG00000016295	-	62	78.947	ENSTRUG00000021586	-	78	78.947	Takifugu_rubripes
ENSPSIG00000016295	-	93	82.906	ENSTNIG00000011469	MSI1	50	82.906	Tetraodon_nigroviridis
ENSPSIG00000016295	-	95	68.376	ENSTNIG00000019814	-	55	69.298	Tetraodon_nigroviridis
ENSPSIG00000016295	-	93	94.048	ENSUAMG00000015514	MSI1	62	93.860	Ursus_americanus