EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016311 (Gene tree)
Gene ID: 102444007
Gene Symbol: SRRT
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 20397 bases
Position: chrJH211388.1:9628-30024
Accession: 102444007
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018453	ARS2	PF04959.13	5.4e-89	1	1
ENSPSIP00000018478	ARS2	PF04959.13	7.2e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018539	SRRT-201	4270	XM_006132645	ENSPSIP00000018453	863 (aa)	XP_006132707	K7GDU2
ENSPSIT00000018564	SRRT-202	2634	-	ENSPSIP00000018478	877 (aa)	-	K7GDW7

Gene Model

Click here to download ENSPSIG00000016311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016311's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016311	SRRT	96	80.902	ENSG00000087087	SRRT	98	91.304	Homo_sapiens
ENSPSIG00000016311	SRRT	95	62.941	ENSAPOG00000002304	srrt	95	65.525	Acanthochromis_polyacanthus
ENSPSIG00000016311	SRRT	96	78.306	ENSAMEG00000014506	SRRT	95	78.706	Ailuropoda_melanoleuca
ENSPSIG00000016311	SRRT	86	76.211	ENSACIG00000015795	srrt	84	76.211	Amphilophus_citrinellus
ENSPSIG00000016311	SRRT	93	55.072	ENSAOCG00000009189	-	52	65.011	Amphiprion_ocellaris
ENSPSIG00000016311	SRRT	52	76.211	ENSAOCG00000009693	srrt	95	65.680	Amphiprion_ocellaris
ENSPSIG00000016311	SRRT	93	54.643	ENSAPEG00000020016	-	52	65.011	Amphiprion_percula
ENSPSIG00000016311	SRRT	84	75.877	ENSAPEG00000003646	srrt	89	75.877	Amphiprion_percula
ENSPSIG00000016311	SRRT	61	57.993	ENSATEG00000003652	-	85	63.675	Anabas_testudineus
ENSPSIG00000016311	SRRT	95	64.656	ENSATEG00000014425	srrt	95	66.706	Anabas_testudineus
ENSPSIG00000016311	SRRT	95	85.835	ENSACAG00000001014	SRRT	95	85.490	Anolis_carolinensis
ENSPSIG00000016311	SRRT	96	80.874	ENSANAG00000031718	SRRT	95	80.664	Aotus_nancymaae
ENSPSIG00000016311	SRRT	52	75.771	ENSACLG00000013156	srrt	50	75.771	Astatotilapia_calliptera
ENSPSIG00000016311	SRRT	51	74.944	ENSAMXG00000016671	srrt	92	64.976	Astyanax_mexicanus
ENSPSIG00000016311	SRRT	96	80.165	ENSBTAG00000001134	SRRT	95	78.648	Bos_taurus
ENSPSIG00000016311	SRRT	66	45.497	WBGene00017085	E01A2.2	85	44.561	Caenorhabditis_elegans
ENSPSIG00000016311	SRRT	96	80.756	ENSCJAG00000014917	SRRT	95	80.546	Callithrix_jacchus
ENSPSIG00000016311	SRRT	96	80.874	ENSCAFG00000023538	SRRT	95	79.241	Canis_familiaris
ENSPSIG00000016311	SRRT	96	80.902	ENSCAFG00020013358	SRRT	99	76.329	Canis_lupus_dingo
ENSPSIG00000016311	SRRT	98	78.356	ENSCHIG00000010495	SRRT	95	78.665	Capra_hircus
ENSPSIG00000016311	SRRT	96	77.251	ENSTSYG00000036426	SRRT	99	76.162	Carlito_syrichta
ENSPSIG00000016311	SRRT	95	80.288	ENSCAPG00000013586	SRRT	100	79.567	Cavia_aperea
ENSPSIG00000016311	SRRT	96	80.565	ENSCPOG00000001739	SRRT	95	79.053	Cavia_porcellus
ENSPSIG00000016311	SRRT	96	80.992	ENSCCAG00000015877	SRRT	95	80.783	Cebus_capucinus
ENSPSIG00000016311	SRRT	96	80.783	ENSCATG00000036306	SRRT	97	78.613	Cercocebus_atys
ENSPSIG00000016311	SRRT	96	80.756	ENSCLAG00000007568	SRRT	100	78.368	Chinchilla_lanigera
ENSPSIG00000016311	SRRT	96	80.756	ENSCSAG00000017996	SRRT	95	79.241	Chlorocebus_sabaeus
ENSPSIG00000016311	SRRT	56	81.329	ENSCHOG00000007815	SRRT	68	80.938	Choloepus_hoffmanni
ENSPSIG00000016311	SRRT	74	95.331	ENSCPBG00000011553	SRRT	83	95.349	Chrysemys_picta_bellii
ENSPSIG00000016311	SRRT	100	41.685	ENSCING00000003506	-	54	51.915	Ciona_intestinalis
ENSPSIG00000016311	SRRT	100	41.222	ENSCSAVG00000008394	-	89	55.172	Ciona_savignyi
ENSPSIG00000016311	SRRT	96	80.664	ENSCANG00000034556	SRRT	95	79.142	Colobus_angolensis_palliatus
ENSPSIG00000016311	SRRT	96	79.929	ENSCGRG00001001594	Srrt	95	79.457	Cricetulus_griseus_chok1gshd
ENSPSIG00000016311	SRRT	96	73.498	ENSCGRG00000007292	Srrt	100	78.154	Cricetulus_griseus_crigri
ENSPSIG00000016311	SRRT	98	60.161	ENSCSEG00000017878	srrt	50	67.615	Cynoglossus_semilaevis
ENSPSIG00000016311	SRRT	76	59.044	ENSCSEG00000005233	-	54	62.635	Cynoglossus_semilaevis
ENSPSIG00000016311	SRRT	90	53.964	ENSCVAG00000017344	-	51	62.413	Cyprinodon_variegatus
ENSPSIG00000016311	SRRT	95	65.047	ENSCVAG00000019848	srrt	54	76.600	Cyprinodon_variegatus
ENSPSIG00000016311	SRRT	95	67.870	ENSDARG00000017762	srrt	51	76.623	Danio_rerio
ENSPSIG00000016311	SRRT	96	80.992	ENSDNOG00000003851	SRRT	95	79.478	Dasypus_novemcinctus
ENSPSIG00000016311	SRRT	96	80.166	ENSDORG00000005584	Srrt	100	79.119	Dipodomys_ordii
ENSPSIG00000016311	SRRT	87	79.592	ENSETEG00000016175	SRRT	77	83.226	Echinops_telfairi
ENSPSIG00000016311	SRRT	64	62.069	ENSEBUG00000008517	-	76	64.384	Eptatretus_burgeri
ENSPSIG00000016311	SRRT	96	80.874	ENSEASG00005016956	SRRT	95	79.122	Equus_asinus_asinus
ENSPSIG00000016311	SRRT	96	80.874	ENSECAG00000012292	SRRT	95	79.122	Equus_caballus
ENSPSIG00000016311	SRRT	81	86.458	ENSEEUG00000009117	SRRT	88	84.146	Erinaceus_europaeus
ENSPSIG00000016311	SRRT	93	56.954	ENSELUG00000021216	-	94	55.673	Esox_lucius
ENSPSIG00000016311	SRRT	96	80.992	ENSFCAG00000006855	SRRT	95	79.359	Felis_catus
ENSPSIG00000016311	SRRT	58	51.923	ENSFALG00000007524	-	70	40.757	Ficedula_albicollis
ENSPSIG00000016311	SRRT	96	78.872	ENSFDAG00000021347	SRRT	100	76.517	Fukomys_damarensis
ENSPSIG00000016311	SRRT	73	74.877	ENSFHEG00000002756	srrt	85	75.109	Fundulus_heteroclitus
ENSPSIG00000016311	SRRT	52	55.556	ENSFHEG00000004105	-	93	55.556	Fundulus_heteroclitus
ENSPSIG00000016311	SRRT	65	63.575	ENSGMOG00000018694	-	79	63.697	Gadus_morhua
ENSPSIG00000016311	SRRT	96	60.910	ENSGMOG00000018619	srrt	51	71.965	Gadus_morhua
ENSPSIG00000016311	SRRT	52	76.159	ENSGAFG00000005423	srrt	51	76.159	Gambusia_affinis
ENSPSIG00000016311	SRRT	93	51.665	ENSGAFG00000020383	-	55	58.761	Gambusia_affinis
ENSPSIG00000016311	SRRT	95	64.912	ENSGACG00000020387	srrt	51	75.604	Gasterosteus_aculeatus
ENSPSIG00000016311	SRRT	93	51.196	ENSGACG00000001100	-	53	60.944	Gasterosteus_aculeatus
ENSPSIG00000016311	SRRT	96	80.874	ENSGGOG00000001508	SRRT	96	79.380	Gorilla_gorilla
ENSPSIG00000016311	SRRT	52	75.991	ENSHBUG00000002942	srrt	50	75.991	Haplochromis_burtoni
ENSPSIG00000016311	SRRT	96	80.471	ENSHGLG00000008344	Srrt	100	78.977	Heterocephalus_glaber_female
ENSPSIG00000016311	SRRT	96	80.924	ENSHGLG00100018857	Srrt	100	80.268	Heterocephalus_glaber_male
ENSPSIG00000016311	SRRT	93	51.870	ENSHCOG00000008904	-	55	60.486	Hippocampus_comes
ENSPSIG00000016311	SRRT	98	64.261	ENSHCOG00000005403	srrt	95	63.690	Hippocampus_comes
ENSPSIG00000016311	SRRT	53	76.139	ENSIPUG00000021150	srrt	95	64.982	Ictalurus_punctatus
ENSPSIG00000016311	SRRT	96	81.020	ENSSTOG00000013776	SRRT	95	79.499	Ictidomys_tridecemlineatus
ENSPSIG00000016311	SRRT	96	80.144	ENSJJAG00000010446	Srrt	100	78.887	Jaculus_jaculus
ENSPSIG00000016311	SRRT	52	61.895	ENSKMAG00000008468	-	53	62.105	Kryptolebias_marmoratus
ENSPSIG00000016311	SRRT	95	64.501	ENSKMAG00000013599	srrt	95	63.905	Kryptolebias_marmoratus
ENSPSIG00000016311	SRRT	95	65.542	ENSLACG00000001089	SRRT	95	65.625	Latimeria_chalumnae
ENSPSIG00000016311	SRRT	52	67.033	ENSLOCG00000013658	srrt	80	70.136	Lepisosteus_oculatus
ENSPSIG00000016311	SRRT	96	80.283	ENSLAFG00000007725	SRRT	95	79.597	Loxodonta_africana
ENSPSIG00000016311	SRRT	96	80.783	ENSMFAG00000033745	SRRT	99	78.613	Macaca_fascicularis
ENSPSIG00000016311	SRRT	96	80.756	ENSMMUG00000021255	SRRT	95	79.241	Macaca_mulatta
ENSPSIG00000016311	SRRT	96	80.756	ENSMNEG00000041864	SRRT	97	78.613	Macaca_nemestrina
ENSPSIG00000016311	SRRT	96	80.783	ENSMLEG00000029479	SRRT	98	78.613	Mandrillus_leucophaeus
ENSPSIG00000016311	SRRT	52	75.000	ENSMAMG00000014311	srrt	95	65.995	Mastacembelus_armatus
ENSPSIG00000016311	SRRT	93	55.085	ENSMAMG00000010681	-	96	54.098	Mastacembelus_armatus
ENSPSIG00000016311	SRRT	52	75.771	ENSMZEG00005016135	srrt	50	75.771	Maylandia_zebra
ENSPSIG00000016311	SRRT	96	78.867	ENSMAUG00000011386	Srrt	100	78.857	Mesocricetus_auratus
ENSPSIG00000016311	SRRT	96	80.756	ENSMICG00000009471	SRRT	98	78.613	Microcebus_murinus
ENSPSIG00000016311	SRRT	96	79.339	ENSMOCG00000001971	Srrt	100	79.429	Microtus_ochrogaster
ENSPSIG00000016311	SRRT	95	65.108	ENSMMOG00000016399	srrt	54	74.172	Mola_mola
ENSPSIG00000016311	SRRT	89	52.393	ENSMMOG00000011137	-	80	64.348	Mola_mola
ENSPSIG00000016311	SRRT	53	82.526	ENSMODG00000004862	SRRT	90	83.299	Monodelphis_domestica
ENSPSIG00000016311	SRRT	57	49.395	ENSMALG00000005567	-	84	51.762	Monopterus_albus
ENSPSIG00000016311	SRRT	90	62.829	ENSMALG00000018604	srrt	53	71.903	Monopterus_albus
ENSPSIG00000016311	SRRT	96	79.785	MGP_CAROLIEiJ_G0027870	Srrt	99	85.019	Mus_caroli
ENSPSIG00000016311	SRRT	96	79.785	ENSMUSG00000037364	Srrt	99	85.019	Mus_musculus
ENSPSIG00000016311	SRRT	96	79.785	MGP_PahariEiJ_G0024456	Srrt	99	84.644	Mus_pahari
ENSPSIG00000016311	SRRT	96	79.785	MGP_SPRETEiJ_G0028875	Srrt	99	85.019	Mus_spretus
ENSPSIG00000016311	SRRT	96	80.638	ENSMPUG00000015839	SRRT	95	79.004	Mustela_putorius_furo
ENSPSIG00000016311	SRRT	96	79.457	ENSMLUG00000009975	SRRT	95	78.648	Myotis_lucifugus
ENSPSIG00000016311	SRRT	96	79.196	ENSNGAG00000023715	Srrt	100	78.338	Nannospalax_galili
ENSPSIG00000016311	SRRT	52	74.558	ENSNBRG00000019100	srrt	52	74.558	Neolamprologus_brichardi
ENSPSIG00000016311	SRRT	95	73.861	ENSNLEG00000011987	SRRT	99	73.576	Nomascus_leucogenys
ENSPSIG00000016311	SRRT	96	65.366	ENSMEUG00000011941	SRRT	94	63.158	Notamacropus_eugenii
ENSPSIG00000016311	SRRT	62	87.121	ENSOPRG00000002502	-	67	87.121	Ochotona_princeps
ENSPSIG00000016311	SRRT	96	80.861	ENSODEG00000016856	SRRT	100	79.463	Octodon_degus
ENSPSIG00000016311	SRRT	93	55.090	ENSONIG00000016080	-	52	64.147	Oreochromis_niloticus
ENSPSIG00000016311	SRRT	98	63.532	ENSORLG00000008120	srrt	52	74.505	Oryzias_latipes
ENSPSIG00000016311	SRRT	98	64.843	ENSORLG00020003058	srrt	52	74.286	Oryzias_latipes_hni
ENSPSIG00000016311	SRRT	98	64.726	ENSORLG00015008062	srrt	52	74.286	Oryzias_latipes_hsok
ENSPSIG00000016311	SRRT	93	54.589	ENSOMEG00000006963	-	53	64.270	Oryzias_melastigma
ENSPSIG00000016311	SRRT	98	65.358	ENSOMEG00000003155	srrt	56	74.725	Oryzias_melastigma
ENSPSIG00000016311	SRRT	96	80.992	ENSOGAG00000017242	SRRT	95	79.478	Otolemur_garnettii
ENSPSIG00000016311	SRRT	96	80.190	ENSOARG00000015645	SRRT	95	78.665	Ovis_aries
ENSPSIG00000016311	SRRT	96	81.020	ENSPPAG00000041090	SRRT	95	80.810	Pan_paniscus
ENSPSIG00000016311	SRRT	96	80.546	ENSPPRG00000009557	SRRT	95	78.903	Panthera_pardus
ENSPSIG00000016311	SRRT	96	81.110	ENSPTIG00000014355	SRRT	95	79.478	Panthera_tigris_altaica
ENSPSIG00000016311	SRRT	96	81.020	ENSPTRG00000019511	SRRT	99	78.162	Pan_troglodytes
ENSPSIG00000016311	SRRT	95	79.788	ENSPANG00000020763	SRRT	97	78.613	Papio_anubis
ENSPSIG00000016311	SRRT	98	67.285	ENSPKIG00000005434	srrt	54	77.489	Paramormyrops_kingsleyae
ENSPSIG00000016311	SRRT	94	66.382	ENSPKIG00000022212	-	52	75.610	Paramormyrops_kingsleyae
ENSPSIG00000016311	SRRT	98	64.953	ENSPMGG00000002841	srrt	56	73.434	Periophthalmus_magnuspinnatus
ENSPSIG00000016311	SRRT	96	80.144	ENSPEMG00000010834	Srrt	100	78.695	Peromyscus_maniculatus_bairdii
ENSPSIG00000016311	SRRT	96	56.655	ENSPMAG00000009614	-	56	65.474	Petromyzon_marinus
ENSPSIG00000016311	SRRT	96	79.906	ENSPCIG00000000816	SRRT	95	78.436	Phascolarctos_cinereus
ENSPSIG00000016311	SRRT	93	52.281	ENSPFOG00000016554	-	55	59.275	Poecilia_formosa
ENSPSIG00000016311	SRRT	52	76.211	ENSPFOG00000005704	srrt	51	76.211	Poecilia_formosa
ENSPSIG00000016311	SRRT	93	52.340	ENSPLAG00000004526	-	56	58.936	Poecilia_latipinna
ENSPSIG00000016311	SRRT	95	65.135	ENSPLAG00000021992	srrt	51	75.717	Poecilia_latipinna
ENSPSIG00000016311	SRRT	89	51.279	ENSPMEG00000001520	-	52	59.629	Poecilia_mexicana
ENSPSIG00000016311	SRRT	85	75.546	ENSPMEG00000001182	srrt	95	66.429	Poecilia_mexicana
ENSPSIG00000016311	SRRT	95	65.182	ENSPREG00000022308	srrt	51	75.991	Poecilia_reticulata
ENSPSIG00000016311	SRRT	96	71.192	ENSPPYG00000017432	SRRT	95	71.056	Pongo_abelii
ENSPSIG00000016311	SRRT	96	77.518	ENSPCAG00000001621	SRRT	95	77.294	Procavia_capensis
ENSPSIG00000016311	SRRT	96	80.756	ENSPCOG00000025751	SRRT	95	79.241	Propithecus_coquereli
ENSPSIG00000016311	SRRT	78	72.489	ENSPVAG00000000834	SRRT	100	70.742	Pteropus_vampyrus
ENSPSIG00000016311	SRRT	52	75.771	ENSPNYG00000018710	srrt	52	75.771	Pundamilia_nyererei
ENSPSIG00000016311	SRRT	76	70.405	ENSPNAG00000010629	srrt	76	62.963	Pygocentrus_nattereri
ENSPSIG00000016311	SRRT	53	75.541	ENSRNOG00000048277	AABR07035787.1	94	76.395	Rattus_norvegicus
ENSPSIG00000016311	SRRT	96	80.756	ENSRBIG00000035718	SRRT	97	78.613	Rhinopithecus_bieti
ENSPSIG00000016311	SRRT	96	80.756	ENSRROG00000030622	SRRT	98	78.613	Rhinopithecus_roxellana
ENSPSIG00000016311	SRRT	96	80.992	ENSSBOG00000033570	SRRT	96	80.788	Saimiri_boliviensis_boliviensis
ENSPSIG00000016311	SRRT	72	76.899	ENSSHAG00000007349	-	100	75.469	Sarcophilus_harrisii
ENSPSIG00000016311	SRRT	94	69.121	ENSSFOG00015017293	srrt	50	79.470	Scleropages_formosus
ENSPSIG00000016311	SRRT	95	66.071	ENSSMAG00000015342	srrt	95	65.680	Scophthalmus_maximus
ENSPSIG00000016311	SRRT	53	59.916	ENSSMAG00000018195	-	81	62.069	Scophthalmus_maximus
ENSPSIG00000016311	SRRT	95	65.546	ENSSDUG00000012049	srrt	95	66.386	Seriola_dumerili
ENSPSIG00000016311	SRRT	52	54.230	ENSSDUG00000002051	-	93	54.348	Seriola_dumerili
ENSPSIG00000016311	SRRT	83	75.938	ENSSLDG00000017477	srrt	85	75.938	Seriola_lalandi_dorsalis
ENSPSIG00000016311	SRRT	52	75.492	ENSSPAG00000005665	srrt	94	65.684	Stegastes_partitus
ENSPSIG00000016311	SRRT	86	52.652	ENSSPAG00000018943	-	93	55.965	Stegastes_partitus
ENSPSIG00000016311	SRRT	95	78.204	ENSSSCG00000024789	SRRT	99	76.179	Sus_scrofa
ENSPSIG00000016311	SRRT	90	52.284	ENSTRUG00000000023	-	51	59.633	Takifugu_rubripes
ENSPSIG00000016311	SRRT	52	73.218	ENSTRUG00000016075	srrt	52	73.218	Takifugu_rubripes
ENSPSIG00000016311	SRRT	74	60.426	ENSTNIG00000011779	srrt	72	72.708	Tetraodon_nigroviridis
ENSPSIG00000016311	SRRT	93	50.000	ENSTNIG00000003111	-	53	61.638	Tetraodon_nigroviridis
ENSPSIG00000016311	SRRT	61	87.879	ENSTBEG00000005212	SRRT	60	86.523	Tupaia_belangeri
ENSPSIG00000016311	SRRT	100	80.430	ENSTTRG00000011104	SRRT	95	79.122	Tursiops_truncatus
ENSPSIG00000016311	SRRT	96	81.043	ENSUAMG00000027997	SRRT	98	79.478	Ursus_americanus
ENSPSIG00000016311	SRRT	96	81.110	ENSUMAG00000011295	SRRT	95	79.478	Ursus_maritimus
ENSPSIG00000016311	SRRT	96	80.874	ENSVVUG00000023572	SRRT	95	79.241	Vulpes_vulpes
ENSPSIG00000016311	SRRT	81	81.461	ENSXETG00000025124	srrt	71	81.013	Xenopus_tropicalis
ENSPSIG00000016311	SRRT	55	47.899	ENSXCOG00000013105	-	93	48.485	Xiphophorus_couchianus
ENSPSIG00000016311	SRRT	98	65.585	ENSXMAG00000007627	srrt	85	75.492	Xiphophorus_maculatus
ENSPSIG00000016311	SRRT	93	51.792	ENSXMAG00000002090	-	55	59.743	Xiphophorus_maculatus