EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPSIG00000016360 (Gene tree)
Gene ID: -
Gene Symbol: CPSF6
Alias: -
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 19943 bases
Position: chrJH208386.1:3153896-3173838
Accession: 102447076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018404	RRM_1	PF00076.22	4.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018490	CPSF6-201	1523	XM_006121598	ENSPSIP00000018404	473 (aa)	-	K7GDP3

Gene Model

Click here to download ENSPSIG00000016360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016360	CPSF6	91	43.527	ENSG00000149532	CPSF7	66	65.546	Homo_sapiens
ENSPSIG00000016360	CPSF6	76	94.512	ENSG00000111605	CPSF6	56	94.512	Homo_sapiens
ENSPSIG00000016360	CPSF6	76	93.902	ENSAMEG00000011781	CPSF6	56	93.902	Ailuropoda_melanoleuca
ENSPSIG00000016360	CPSF6	67	55.682	ENSAOCG00000012357	CPSF7	53	47.826	Amphiprion_ocellaris
ENSPSIG00000016360	CPSF6	73	48.718	ENSAPEG00000015375	CPSF7	53	47.826	Amphiprion_percula
ENSPSIG00000016360	CPSF6	76	94.512	ENSANAG00000019240	CPSF6	57	94.512	Aotus_nancymaae
ENSPSIG00000016360	CPSF6	70	81.343	ENSACLG00000026325	cpsf6	56	78.788	Astatotilapia_calliptera
ENSPSIG00000016360	CPSF6	76	94.512	ENSBTAG00000007323	CPSF6	56	94.512	Bos_taurus
ENSPSIG00000016360	CPSF6	91	43.527	ENSCJAG00000019282	CPSF7	56	65.833	Callithrix_jacchus
ENSPSIG00000016360	CPSF6	76	94.512	ENSCJAG00000001798	CPSF6	62	94.512	Callithrix_jacchus
ENSPSIG00000016360	CPSF6	76	94.512	ENSCAFG00000000424	CPSF6	58	94.512	Canis_familiaris
ENSPSIG00000016360	CPSF6	76	94.512	ENSCAFG00020016950	CPSF6	56	94.512	Canis_lupus_dingo
ENSPSIG00000016360	CPSF6	76	94.512	ENSCHIG00000010792	CPSF6	56	94.512	Capra_hircus
ENSPSIG00000016360	CPSF6	76	94.512	ENSTSYG00000008591	CPSF6	63	94.410	Carlito_syrichta
ENSPSIG00000016360	CPSF6	76	94.512	ENSCPOG00000015201	CPSF6	56	94.512	Cavia_porcellus
ENSPSIG00000016360	CPSF6	76	94.512	ENSCCAG00000028149	CPSF6	62	94.512	Cebus_capucinus
ENSPSIG00000016360	CPSF6	84	94.512	ENSCATG00000039288	CPSF6	60	94.512	Cercocebus_atys
ENSPSIG00000016360	CPSF6	76	94.512	ENSCLAG00000010149	CPSF6	58	94.512	Chinchilla_lanigera
ENSPSIG00000016360	CPSF6	76	94.512	ENSCSAG00000004232	CPSF6	56	94.512	Chlorocebus_sabaeus
ENSPSIG00000016360	CPSF6	100	88.868	ENSCPBG00000013322	CPSF6	91	86.415	Chrysemys_picta_bellii
ENSPSIG00000016360	CPSF6	76	94.512	ENSCANG00000037294	CPSF6	58	94.512	Colobus_angolensis_palliatus
ENSPSIG00000016360	CPSF6	76	94.512	ENSCGRG00001018082	Cpsf6	56	94.512	Cricetulus_griseus_chok1gshd
ENSPSIG00000016360	CPSF6	76	94.512	ENSCGRG00000016909	Cpsf6	58	94.512	Cricetulus_griseus_crigri
ENSPSIG00000016360	CPSF6	80	36.111	ENSCSEG00000001956	CPSF7	79	43.299	Cynoglossus_semilaevis
ENSPSIG00000016360	CPSF6	96	31.185	ENSCVAG00000007392	CPSF7	61	42.727	Cyprinodon_variegatus
ENSPSIG00000016360	CPSF6	91	43.750	ENSDNOG00000018517	CPSF7	56	66.667	Dasypus_novemcinctus
ENSPSIG00000016360	CPSF6	76	94.512	ENSDORG00000002950	Cpsf6	58	94.512	Dipodomys_ordii
ENSPSIG00000016360	CPSF6	68	100.000	ENSETEG00000002097	CPSF6	62	97.468	Echinops_telfairi
ENSPSIG00000016360	CPSF6	76	94.512	ENSEASG00005008066	CPSF6	56	94.512	Equus_asinus_asinus
ENSPSIG00000016360	CPSF6	63	62.205	ENSECAG00000018521	CPSF7	63	66.667	Equus_caballus
ENSPSIG00000016360	CPSF6	76	94.512	ENSECAG00000015988	CPSF6	56	94.512	Equus_caballus
ENSPSIG00000016360	CPSF6	77	92.982	ENSEEUG00000015039	CPSF6	59	92.982	Erinaceus_europaeus
ENSPSIG00000016360	CPSF6	76	94.512	ENSFCAG00000002855	CPSF6	56	94.512	Felis_catus
ENSPSIG00000016360	CPSF6	91	43.653	ENSFCAG00000013677	CPSF7	63	66.667	Felis_catus
ENSPSIG00000016360	CPSF6	90	39.468	ENSFALG00000011927	CPSF7	61	52.336	Ficedula_albicollis
ENSPSIG00000016360	CPSF6	76	94.512	ENSFDAG00000002281	CPSF6	56	94.512	Fukomys_damarensis
ENSPSIG00000016360	CPSF6	91	42.762	ENSGALG00000040962	CPSF7	50	52.778	Gallus_gallus
ENSPSIG00000016360	CPSF6	100	88.868	ENSGAGG00000010228	CPSF6	100	86.415	Gopherus_agassizii
ENSPSIG00000016360	CPSF6	76	94.512	ENSGGOG00000008211	CPSF6	62	94.512	Gorilla_gorilla
ENSPSIG00000016360	CPSF6	70	81.343	ENSHBUG00000005998	cpsf6	56	78.788	Haplochromis_burtoni
ENSPSIG00000016360	CPSF6	76	94.512	ENSHGLG00000000792	CPSF6	56	94.512	Heterocephalus_glaber_female
ENSPSIG00000016360	CPSF6	76	94.512	ENSHGLG00100013861	CPSF6	58	94.512	Heterocephalus_glaber_male
ENSPSIG00000016360	CPSF6	76	94.512	ENSSTOG00000014133	CPSF6	53	94.512	Ictidomys_tridecemlineatus
ENSPSIG00000016360	CPSF6	76	94.512	ENSJJAG00000014647	Cpsf6	58	94.512	Jaculus_jaculus
ENSPSIG00000016360	CPSF6	72	86.207	ENSLOCG00000016190	cpsf6	57	83.636	Lepisosteus_oculatus
ENSPSIG00000016360	CPSF6	76	94.512	ENSMFAG00000045318	CPSF6	62	94.512	Macaca_fascicularis
ENSPSIG00000016360	CPSF6	76	94.512	ENSMMUG00000002921	CPSF6	62	94.512	Macaca_mulatta
ENSPSIG00000016360	CPSF6	76	94.512	ENSMNEG00000036311	CPSF6	62	94.512	Macaca_nemestrina
ENSPSIG00000016360	CPSF6	76	94.512	ENSMLEG00000003957	CPSF6	58	94.512	Mandrillus_leucophaeus
ENSPSIG00000016360	CPSF6	70	81.343	ENSMZEG00005007975	cpsf6	56	78.788	Maylandia_zebra
ENSPSIG00000016360	CPSF6	76	94.512	ENSMAUG00000013240	Cpsf6	56	94.512	Mesocricetus_auratus
ENSPSIG00000016360	CPSF6	76	94.512	ENSMICG00000007385	-	56	94.512	Microcebus_murinus
ENSPSIG00000016360	CPSF6	76	94.512	ENSMOCG00000013982	Cpsf6	56	94.512	Microtus_ochrogaster
ENSPSIG00000016360	CPSF6	68	51.852	ENSMODG00000020364	CPSF7	58	51.852	Monodelphis_domestica
ENSPSIG00000016360	CPSF6	82	78.916	ENSMALG00000014908	cpsf6	65	78.788	Monopterus_albus
ENSPSIG00000016360	CPSF6	76	94.512	MGP_CAROLIEiJ_G0015834	Cpsf6	56	94.512	Mus_caroli
ENSPSIG00000016360	CPSF6	76	94.512	ENSMUSG00000055531	Cpsf6	56	94.512	Mus_musculus
ENSPSIG00000016360	CPSF6	76	94.512	MGP_PahariEiJ_G0031253	Cpsf6	54	94.512	Mus_pahari
ENSPSIG00000016360	CPSF6	76	94.512	MGP_SPRETEiJ_G0016657	Cpsf6	56	94.512	Mus_spretus
ENSPSIG00000016360	CPSF6	95	67.857	ENSMLUG00000028728	-	80	90.854	Myotis_lucifugus
ENSPSIG00000016360	CPSF6	76	94.512	ENSNGAG00000015901	Cpsf6	56	94.512	Nannospalax_galili
ENSPSIG00000016360	CPSF6	76	94.512	ENSNLEG00000003798	CPSF6	62	94.512	Nomascus_leucogenys
ENSPSIG00000016360	CPSF6	76	95.122	ENSMEUG00000015041	CPSF6	56	95.122	Notamacropus_eugenii
ENSPSIG00000016360	CPSF6	76	93.902	ENSOPRG00000005199	CPSF6	58	93.902	Ochotona_princeps
ENSPSIG00000016360	CPSF6	69	81.203	ENSONIG00000011702	cpsf6	56	78.788	Oreochromis_niloticus
ENSPSIG00000016360	CPSF6	76	94.512	ENSOCUG00000013505	CPSF6	56	94.512	Oryctolagus_cuniculus
ENSPSIG00000016360	CPSF6	71	43.333	ENSORLG00020012657	CPSF7	52	42.391	Oryzias_latipes_hni
ENSPSIG00000016360	CPSF6	91	39.034	ENSOARG00000012937	CPSF7	52	52.336	Ovis_aries
ENSPSIG00000016360	CPSF6	76	94.512	ENSOARG00000020532	CPSF6	64	94.512	Ovis_aries
ENSPSIG00000016360	CPSF6	76	94.512	ENSPPAG00000005301	CPSF6	64	94.512	Pan_paniscus
ENSPSIG00000016360	CPSF6	91	43.556	ENSPPRG00000008538	CPSF7	57	51.852	Panthera_pardus
ENSPSIG00000016360	CPSF6	76	94.512	ENSPPRG00000021620	CPSF6	56	94.512	Panthera_pardus
ENSPSIG00000016360	CPSF6	76	94.512	ENSPTIG00000004079	CPSF6	61	94.512	Panthera_tigris_altaica
ENSPSIG00000016360	CPSF6	76	94.512	ENSPTRG00000005205	CPSF6	62	94.512	Pan_troglodytes
ENSPSIG00000016360	CPSF6	76	94.512	ENSPANG00000011641	CPSF6	62	94.410	Papio_anubis
ENSPSIG00000016360	CPSF6	51	54.135	ENSPKIG00000018054	CPSF7	55	55.285	Paramormyrops_kingsleyae
ENSPSIG00000016360	CPSF6	76	94.512	ENSPEMG00000007973	Cpsf6	58	94.512	Peromyscus_maniculatus_bairdii
ENSPSIG00000016360	CPSF6	76	95.122	ENSPCIG00000019063	CPSF6	56	95.122	Phascolarctos_cinereus
ENSPSIG00000016360	CPSF6	68	51.852	ENSPCIG00000002551	CPSF7	54	69.492	Phascolarctos_cinereus
ENSPSIG00000016360	CPSF6	76	94.512	ENSPCAG00000011574	CPSF6	56	94.512	Procavia_capensis
ENSPSIG00000016360	CPSF6	76	94.512	ENSPCOG00000024384	CPSF6	62	94.512	Propithecus_coquereli
ENSPSIG00000016360	CPSF6	76	94.512	ENSPVAG00000015753	CPSF6	56	94.512	Pteropus_vampyrus
ENSPSIG00000016360	CPSF6	70	81.343	ENSPNYG00000020315	cpsf6	56	78.788	Pundamilia_nyererei
ENSPSIG00000016360	CPSF6	62	45.455	ENSPNAG00000015073	CPSF7	69	41.837	Pygocentrus_nattereri
ENSPSIG00000016360	CPSF6	76	94.512	ENSRBIG00000042827	CPSF6	62	94.512	Rhinopithecus_bieti
ENSPSIG00000016360	CPSF6	91	43.527	ENSRBIG00000031429	CPSF7	63	65.833	Rhinopithecus_bieti
ENSPSIG00000016360	CPSF6	76	94.512	ENSRROG00000042758	CPSF6	56	94.512	Rhinopithecus_roxellana
ENSPSIG00000016360	CPSF6	76	94.512	ENSSBOG00000010652	CPSF6	63	94.512	Saimiri_boliviensis_boliviensis
ENSPSIG00000016360	CPSF6	88	35.897	ENSSFOG00015010288	cpsf7	64	44.898	Scleropages_formosus
ENSPSIG00000016360	CPSF6	76	94.512	ENSSARG00000006743	CPSF6	56	94.512	Sorex_araneus
ENSPSIG00000016360	CPSF6	91	44.018	ENSSPUG00000019344	CPSF7	58	51.852	Sphenodon_punctatus
ENSPSIG00000016360	CPSF6	91	43.750	ENSSSCG00000013083	CPSF7	56	66.667	Sus_scrofa
ENSPSIG00000016360	CPSF6	76	94.512	ENSSSCG00000038031	CPSF6	61	94.512	Sus_scrofa
ENSPSIG00000016360	CPSF6	76	94.512	ENSUMAG00000020779	CPSF6	61	94.512	Ursus_maritimus
ENSPSIG00000016360	CPSF6	76	94.512	ENSVPAG00000008469	CPSF6	58	94.512	Vicugna_pacos
ENSPSIG00000016360	CPSF6	91	43.653	ENSVVUG00000004939	CPSF7	56	66.667	Vulpes_vulpes
ENSPSIG00000016360	CPSF6	76	94.512	ENSVVUG00000010156	-	61	94.512	Vulpes_vulpes