EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Plus strand
Length: 21578 bases
Position: chrJH207523.1:73320-94897
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	1	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	2	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	3	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	4	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	5	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	6	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	7	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	8	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	9	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	10	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	11	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	12	13
ENSPSIP00000018451	zf-C2H2	PF00096.26	6.7e-77	13	13
ENSPSIP00000018451	zf-met	PF12874.7	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018537	-	1625	-	ENSPSIP00000018451	540 (aa)	-	K7GDU0

Gene Model

Click here to download ENSPSIG00000016380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016380	-	68	45.614	ENSPSIG00000009270	-	72	45.614
ENSPSIG00000016380	-	69	48.347	ENSPSIG00000000672	-	85	48.347
ENSPSIG00000016380	-	100	49.383	ENSPSIG00000004502	-	94	49.383
ENSPSIG00000016380	-	77	39.623	ENSPSIG00000004303	ZNF319	93	39.155
ENSPSIG00000016380	-	98	56.272	ENSPSIG00000004614	-	99	56.272
ENSPSIG00000016380	-	66	35.211	ENSPSIG00000011722	GTF3A	69	35.211
ENSPSIG00000016380	-	98	52.652	ENSPSIG00000005672	-	99	52.652
ENSPSIG00000016380	-	76	42.628	ENSPSIG00000006586	-	99	42.025
ENSPSIG00000016380	-	84	30.000	ENSPSIG00000016553	-	60	30.000
ENSPSIG00000016380	-	95	52.506	ENSPSIG00000009893	-	97	52.506
ENSPSIG00000016380	-	72	56.250	ENSPSIG00000006790	-	88	56.250
ENSPSIG00000016380	-	74	38.117	ENSPSIG00000004682	ZNF652	66	38.426
ENSPSIG00000016380	-	71	42.478	ENSPSIG00000011896	ZIC3	57	42.478
ENSPSIG00000016380	-	71	44.156	ENSPSIG00000014208	-	65	44.156
ENSPSIG00000016380	-	97	55.639	ENSPSIG00000010328	-	97	56.972
ENSPSIG00000016380	-	72	55.163	ENSPSIG00000010405	-	99	55.163
ENSPSIG00000016380	-	89	50.135	ENSPSIG00000012650	-	96	50.135
ENSPSIG00000016380	-	98	50.847	ENSPSIG00000005603	-	97	50.847
ENSPSIG00000016380	-	73	58.309	ENSPSIG00000001026	-	89	58.309
ENSPSIG00000016380	-	67	42.857	ENSPSIG00000016395	SNAI2	53	42.857
ENSPSIG00000016380	-	99	53.333	ENSPSIG00000002565	-	92	53.333
ENSPSIG00000016380	-	79	50.575	ENSPSIG00000003152	-	79	50.575
ENSPSIG00000016380	-	78	34.426	ENSPSIG00000012859	ZBTB41	53	34.426
ENSPSIG00000016380	-	72	47.312	ENSPSIG00000000075	-	77	47.312
ENSPSIG00000016380	-	78	44.030	ENSPSIG00000000760	-	94	44.030
ENSPSIG00000016380	-	73	39.103	ENSPSIG00000013505	PRDM5	90	39.103
ENSPSIG00000016380	-	69	39.560	ENSPSIG00000002913	OVOL1	58	39.560
ENSPSIG00000016380	-	79	42.963	ENSPSIG00000004262	SNAI3	77	42.963
ENSPSIG00000016380	-	88	48.718	ENSPSIG00000004647	-	73	48.718
ENSPSIG00000016380	-	74	62.109	ENSPSIG00000002569	-	78	61.303
ENSPSIG00000016380	-	100	52.381	ENSPSIG00000010248	-	95	52.381
ENSPSIG00000016380	-	97	56.846	ENSPSIG00000015465	-	98	56.846
ENSPSIG00000016380	-	98	52.956	ENSPSIG00000013021	-	99	53.351
ENSPSIG00000016380	-	68	40.000	ENSPSIG00000005522	ZNF646	99	40.000
ENSPSIG00000016380	-	77	47.765	ENSPSIG00000008588	-	100	47.765
ENSPSIG00000016380	-	79	44.295	ENSPSIG00000012112	GFI1B	79	44.295
ENSPSIG00000016380	-	74	56.371	ENSPSIG00000015216	-	82	56.371
ENSPSIG00000016380	-	73	52.174	ENSPSIG00000000333	-	82	49.621
ENSPSIG00000016380	-	72	53.604	ENSPSIG00000000522	-	86	53.604
ENSPSIG00000016380	-	70	57.202	ENSPSIG00000016247	-	53	57.202
ENSPSIG00000016380	-	68	34.857	ENSPSIG00000011562	-	87	31.707
ENSPSIG00000016380	-	99	52.011	ENSPSIG00000015459	-	99	52.011
ENSPSIG00000016380	-	97	56.929	ENSPSIG00000012865	-	98	57.105
ENSPSIG00000016380	-	71	55.245	ENSPSIG00000009650	-	69	55.245
ENSPSIG00000016380	-	72	54.756	ENSPSIG00000009603	-	99	54.756
ENSPSIG00000016380	-	71	51.099	ENSPSIG00000001739	-	100	51.099
ENSPSIG00000016380	-	76	30.396	ENSPSIG00000002538	ZNF521	92	30.396
ENSPSIG00000016380	-	72	49.686	ENSPSIG00000005128	-	100	48.397
ENSPSIG00000016380	-	67	40.000	ENSPSIG00000003607	SNAI1	52	40.260

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016380	-	74	56.777	ENSACAG00000008664	-	63	56.777	Anolis_carolinensis
ENSPSIG00000016380	-	72	47.407	ENSACAG00000024898	-	98	47.407	Anolis_carolinensis
ENSPSIG00000016380	-	91	42.802	ENSACAG00000024956	-	99	42.802	Anolis_carolinensis
ENSPSIG00000016380	-	74	58.582	ENSAMXG00000036233	-	80	58.582	Astyanax_mexicanus
ENSPSIG00000016380	-	71	53.982	ENSAMXG00000042784	-	95	53.982	Astyanax_mexicanus
ENSPSIG00000016380	-	72	55.795	ENSAMXG00000025452	-	96	55.795	Astyanax_mexicanus
ENSPSIG00000016380	-	69	55.723	ENSAMXG00000038536	-	86	52.367	Astyanax_mexicanus
ENSPSIG00000016380	-	72	53.145	ENSAMXG00000038325	-	94	53.769	Astyanax_mexicanus
ENSPSIG00000016380	-	76	43.716	ENSAMXG00000035246	-	77	43.716	Astyanax_mexicanus
ENSPSIG00000016380	-	71	55.228	ENSAMXG00000010805	-	94	55.228	Astyanax_mexicanus
ENSPSIG00000016380	-	74	55.385	ENSAMXG00000032841	-	83	55.385	Astyanax_mexicanus
ENSPSIG00000016380	-	76	54.756	ENSAMXG00000034847	-	87	54.756	Astyanax_mexicanus
ENSPSIG00000016380	-	72	53.333	ENSAMXG00000034344	-	79	53.333	Astyanax_mexicanus
ENSPSIG00000016380	-	69	54.683	ENSAMXG00000042746	-	86	52.663	Astyanax_mexicanus
ENSPSIG00000016380	-	78	57.672	ENSAMXG00000038636	-	99	57.672	Astyanax_mexicanus
ENSPSIG00000016380	-	71	43.974	ENSBTAG00000038322	-	92	43.974	Bos_taurus
ENSPSIG00000016380	-	72	48.582	ENSCPBG00000001526	-	92	48.582	Chrysemys_picta_bellii
ENSPSIG00000016380	-	69	60.504	ENSCPBG00000026433	-	56	60.504	Chrysemys_picta_bellii
ENSPSIG00000016380	-	73	42.279	ENSCPBG00000013652	-	73	42.279	Chrysemys_picta_bellii
ENSPSIG00000016380	-	91	41.528	ENSCPBG00000008580	-	100	43.902	Chrysemys_picta_bellii
ENSPSIG00000016380	-	74	47.532	ENSCSAVG00000010960	-	99	47.532	Ciona_savignyi
ENSPSIG00000016380	-	75	45.307	ENSDNOG00000047495	-	79	45.307	Dasypus_novemcinctus
ENSPSIG00000016380	-	73	49.457	ENSEBUG00000002075	-	78	49.457	Eptatretus_burgeri
ENSPSIG00000016380	-	69	47.838	ENSEBUG00000005264	-	79	47.838	Eptatretus_burgeri
ENSPSIG00000016380	-	75	48.515	ENSEBUG00000008306	-	79	49.239	Eptatretus_burgeri
ENSPSIG00000016380	-	73	39.323	ENSEBUG00000014717	-	75	39.323	Eptatretus_burgeri
ENSPSIG00000016380	-	69	40.712	ENSEBUG00000013875	-	86	40.712	Eptatretus_burgeri
ENSPSIG00000016380	-	77	48.947	ENSEBUG00000011694	-	95	48.947	Eptatretus_burgeri
ENSPSIG00000016380	-	96	49.239	ENSEBUG00000011435	-	97	49.239	Eptatretus_burgeri
ENSPSIG00000016380	-	95	51.751	ENSEBUG00000012919	-	91	51.751	Eptatretus_burgeri
ENSPSIG00000016380	-	99	46.358	ENSEBUG00000015837	-	96	48.069	Eptatretus_burgeri
ENSPSIG00000016380	-	75	43.871	ENSEASG00005004469	-	72	43.871	Equus_asinus_asinus
ENSPSIG00000016380	-	100	46.992	ENSFHEG00000004382	-	67	46.992	Fundulus_heteroclitus
ENSPSIG00000016380	-	72	37.500	ENSGMOG00000018506	-	100	44.737	Gadus_morhua
ENSPSIG00000016380	-	76	55.754	ENSGALG00000054325	-	97	55.754	Gallus_gallus
ENSPSIG00000016380	-	72	53.623	ENSGALG00000046336	-	98	53.623	Gallus_gallus
ENSPSIG00000016380	-	98	51.273	ENSGALG00000044069	-	94	51.822	Gallus_gallus
ENSPSIG00000016380	-	78	52.299	ENSGALG00000053507	-	91	52.299	Gallus_gallus
ENSPSIG00000016380	-	81	45.833	ENSGALG00000049609	-	65	45.833	Gallus_gallus
ENSPSIG00000016380	-	74	53.538	ENSGALG00000055127	-	79	53.538	Gallus_gallus
ENSPSIG00000016380	-	68	45.045	ENSGACG00000006283	-	95	46.617	Gasterosteus_aculeatus
ENSPSIG00000016380	-	89	52.333	ENSGAGG00000018885	-	81	52.333	Gopherus_agassizii
ENSPSIG00000016380	-	75	53.086	ENSGAGG00000011366	-	94	53.086	Gopherus_agassizii
ENSPSIG00000016380	-	72	55.600	ENSGAGG00000011399	-	84	55.600	Gopherus_agassizii
ENSPSIG00000016380	-	73	48.207	ENSHCOG00000018201	-	83	48.207	Hippocampus_comes
ENSPSIG00000016380	-	77	52.817	ENSIPUG00000015468	-	88	52.817	Ictalurus_punctatus
ENSPSIG00000016380	-	75	39.752	ENSIPUG00000012109	ZN12	51	39.385	Ictalurus_punctatus
ENSPSIG00000016380	-	76	55.764	ENSIPUG00000021515	-	88	55.764	Ictalurus_punctatus
ENSPSIG00000016380	-	69	51.556	ENSJJAG00000023633	Zfp672	89	46.026	Jaculus_jaculus
ENSPSIG00000016380	-	71	40.370	ENSLACG00000009005	-	100	40.370	Latimeria_chalumnae
ENSPSIG00000016380	-	96	41.276	ENSLACG00000022211	-	98	41.276	Latimeria_chalumnae
ENSPSIG00000016380	-	69	41.304	ENSLACG00000005264	-	99	41.667	Latimeria_chalumnae
ENSPSIG00000016380	-	71	44.371	ENSLOCG00000017864	-	99	44.371	Lepisosteus_oculatus
ENSPSIG00000016380	-	75	43.860	ENSLOCG00000014210	-	55	42.487	Lepisosteus_oculatus
ENSPSIG00000016380	-	72	55.132	ENSMGAG00000013362	-	100	55.132	Meleagris_gallopavo
ENSPSIG00000016380	-	72	49.474	ENSMAUG00000009945	Zfp672	89	44.479	Mesocricetus_auratus
ENSPSIG00000016380	-	74	44.203	ENSMMOG00000003923	-	83	44.203	Mola_mola
ENSPSIG00000016380	-	98	46.114	ENSMODG00000010532	-	99	46.392	Monodelphis_domestica
ENSPSIG00000016380	-	96	46.842	ENSMODG00000001880	-	99	46.842	Monodelphis_domestica
ENSPSIG00000016380	-	99	48.617	MGP_CAROLIEiJ_G0030502	-	96	48.617	Mus_caroli
ENSPSIG00000016380	-	70	50.420	MGP_CAROLIEiJ_G0016391	Zfp672	95	60.714	Mus_caroli
ENSPSIG00000016380	-	96	48.400	ENSMUSG00000030823	9130019O22Rik	90	47.500	Mus_musculus
ENSPSIG00000016380	-	70	50.420	MGP_SPRETEiJ_G0017233	Zfp672	95	51.220	Mus_spretus
ENSPSIG00000016380	-	68	51.429	MGP_SPRETEiJ_G0031613	-	84	49.187	Mus_spretus
ENSPSIG00000016380	-	97	42.475	ENSNGAG00000015777	Zim1	95	42.475	Nannospalax_galili
ENSPSIG00000016380	-	71	49.593	ENSNBRG00000007276	-	53	49.593	Neolamprologus_brichardi
ENSPSIG00000016380	-	71	41.582	ENSNBRG00000000708	-	90	41.582	Neolamprologus_brichardi
ENSPSIG00000016380	-	68	46.667	ENSORLG00020001922	-	75	41.447	Oryzias_latipes_hni
ENSPSIG00000016380	-	69	50.538	ENSOMEG00000001598	-	68	50.538	Oryzias_melastigma
ENSPSIG00000016380	-	71	48.031	ENSPREG00000002642	-	91	48.031	Poecilia_reticulata
ENSPSIG00000016380	-	71	55.000	ENSPNYG00000015486	-	51	55.000	Pundamilia_nyererei
ENSPSIG00000016380	-	75	56.621	ENSPNAG00000018395	-	74	56.140	Pygocentrus_nattereri
ENSPSIG00000016380	-	76	56.633	ENSPNAG00000000088	-	87	56.633	Pygocentrus_nattereri
ENSPSIG00000016380	-	87	46.442	ENSRNOG00000002713	Zfp672	90	47.213	Rattus_norvegicus
ENSPSIG00000016380	-	96	45.385	ENSSHAG00000018106	-	99	45.385	Sarcophilus_harrisii
ENSPSIG00000016380	-	74	51.081	ENSSFOG00015019818	-	75	47.883	Scleropages_formosus
ENSPSIG00000016380	-	90	43.243	ENSSMAG00000004252	-	92	43.243	Scophthalmus_maximus
ENSPSIG00000016380	-	74	60.317	ENSSPUG00000004366	-	59	60.317	Sphenodon_punctatus
ENSPSIG00000016380	-	74	54.422	ENSSPUG00000010016	-	94	57.721	Sphenodon_punctatus
ENSPSIG00000016380	-	73	51.163	ENSSPAG00000021653	-	91	51.163	Stegastes_partitus
ENSPSIG00000016380	-	71	60.000	ENSTGUG00000018351	-	99	60.000	Taeniopygia_guttata
ENSPSIG00000016380	-	69	56.032	ENSTGUG00000015210	-	100	56.032	Taeniopygia_guttata
ENSPSIG00000016380	-	79	42.211	ENSTRUG00000022066	-	88	42.211	Takifugu_rubripes
ENSPSIG00000016380	-	71	45.013	ENSXETG00000031192	-	100	45.013	Xenopus_tropicalis
ENSPSIG00000016380	-	72	50.763	ENSXCOG00000006553	-	86	50.763	Xiphophorus_couchianus
ENSPSIG00000016380	-	71	43.396	ENSXMAG00000026680	-	83	43.396	Xiphophorus_maculatus