EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPSIG00000016395 (Gene tree)
Gene ID: 102456826
Gene Symbol: SNAI2
Alias: -
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Pelodiscus_sinensis
Status: putative
Strand: Minus strand
Length: 3409 bases
Position: chrJH205572.1:934473-937881
Accession: 102456826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPSIP00000018448	zf-C2H2	PF00096.26	1.1e-27	1	5
ENSPSIP00000018448	zf-C2H2	PF00096.26	1.1e-27	2	5
ENSPSIP00000018448	zf-C2H2	PF00096.26	1.1e-27	3	5
ENSPSIP00000018448	zf-C2H2	PF00096.26	1.1e-27	4	5
ENSPSIP00000018448	zf-C2H2	PF00096.26	1.1e-27	5	5
ENSPSIP00000018448	zf-met	PF12874.7	2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPSIT00000018534	SNAI2-201	1936	XM_006112169	ENSPSIP00000018448	268 (aa)	XP_006112231	K7GDT7

Gene Model

Click here to download ENSPSIG00000016395's gene model file

Pathways

Pathway ID	Pathway Name	Source
pss04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPSIG00000016395's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPSIG00000016395	SNAI2	54	35.075	ENSPSIG00000004303	ZNF319	87	35.075
ENSPSIG00000016395	SNAI2	58	39.080	ENSPSIG00000005128	-	99	42.353
ENSPSIG00000016395	SNAI2	99	68.889	ENSPSIG00000003607	SNAI1	98	68.030
ENSPSIG00000016395	SNAI2	90	32.979	ENSPSIG00000016553	-	54	35.172
ENSPSIG00000016395	SNAI2	93	35.766	ENSPSIG00000009270	-	66	39.623
ENSPSIG00000016395	SNAI2	52	38.144	ENSPSIG00000001026	-	90	38.144
ENSPSIG00000016395	SNAI2	50	40.698	ENSPSIG00000006790	-	91	40.698
ENSPSIG00000016395	SNAI2	67	33.099	ENSPSIG00000011562	-	57	35.172
ENSPSIG00000016395	SNAI2	51	45.902	ENSPSIG00000012865	-	69	45.902
ENSPSIG00000016395	SNAI2	86	57.872	ENSPSIG00000004262	SNAI3	56	80.986
ENSPSIG00000016395	SNAI2	52	43.284	ENSPSIG00000010248	-	63	43.284
ENSPSIG00000016395	SNAI2	59	39.241	ENSPSIG00000008588	-	100	39.241
ENSPSIG00000016395	SNAI2	67	41.606	ENSPSIG00000015459	-	69	41.606
ENSPSIG00000016395	SNAI2	55	42.056	ENSPSIG00000009603	-	96	42.056
ENSPSIG00000016395	SNAI2	53	42.857	ENSPSIG00000016380	-	67	42.857
ENSPSIG00000016395	SNAI2	73	41.379	ENSPSIG00000000075	-	71	41.379
ENSPSIG00000016395	SNAI2	53	42.202	ENSPSIG00000006586	-	99	42.202
ENSPSIG00000016395	SNAI2	61	41.558	ENSPSIG00000003152	-	76	41.558
ENSPSIG00000016395	SNAI2	56	38.060	ENSPSIG00000005603	-	59	38.060
ENSPSIG00000016395	SNAI2	59	35.714	ENSPSIG00000005522	ZNF646	98	35.577
ENSPSIG00000016395	SNAI2	53	42.361	ENSPSIG00000005672	-	63	42.361
ENSPSIG00000016395	SNAI2	56	38.889	ENSPSIG00000009650	-	66	38.889
ENSPSIG00000016395	SNAI2	85	44.595	ENSPSIG00000010328	-	66	44.595
ENSPSIG00000016395	SNAI2	51	43.421	ENSPSIG00000004502	-	51	43.421
ENSPSIG00000016395	SNAI2	50	37.313	ENSPSIG00000009893	-	59	37.313
ENSPSIG00000016395	SNAI2	50	39.450	ENSPSIG00000000522	-	76	39.450
ENSPSIG00000016395	SNAI2	52	38.462	ENSPSIG00000016247	-	52	38.462
ENSPSIG00000016395	SNAI2	50	41.667	ENSPSIG00000000672	-	85	35.556
ENSPSIG00000016395	SNAI2	51	45.522	ENSPSIG00000013021	-	73	45.522
ENSPSIG00000016395	SNAI2	64	35.398	ENSPSIG00000015465	-	70	36.893
ENSPSIG00000016395	SNAI2	52	41.606	ENSPSIG00000013505	PRDM5	57	41.606
ENSPSIG00000016395	SNAI2	56	32.667	ENSPSIG00000004682	ZNF652	60	32.026
ENSPSIG00000016395	SNAI2	84	36.567	ENSPSIG00000000760	-	80	36.567
ENSPSIG00000016395	SNAI2	54	35.593	ENSPSIG00000008734	GFI1	50	35.593
ENSPSIG00000016395	SNAI2	50	41.045	ENSPSIG00000010405	-	99	41.045
ENSPSIG00000016395	SNAI2	51	41.748	ENSPSIG00000015216	-	70	41.748
ENSPSIG00000016395	SNAI2	61	34.337	ENSPSIG00000001739	-	99	34.337
ENSPSIG00000016395	SNAI2	54	40.506	ENSPSIG00000002569	-	90	40.506
ENSPSIG00000016395	SNAI2	56	35.294	ENSPSIG00000004614	-	87	35.294
ENSPSIG00000016395	SNAI2	51	42.727	ENSPSIG00000000333	-	68	42.727
ENSPSIG00000016395	SNAI2	52	40.426	ENSPSIG00000012650	-	68	40.426
ENSPSIG00000016395	SNAI2	57	37.179	ENSPSIG00000012859	ZBTB41	50	31.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPSIG00000016395	SNAI2	99	49.320	ENSG00000185669	SNAI3	99	46.823	Homo_sapiens
ENSPSIG00000016395	SNAI2	100	93.284	ENSG00000019549	SNAI2	100	93.284	Homo_sapiens
ENSPSIG00000016395	SNAI2	100	94.776	ENSAMEG00000009606	SNAI2	100	94.776	Ailuropoda_melanoleuca
ENSPSIG00000016395	SNAI2	99	50.000	ENSANAG00000032748	SNAI3	99	44.951	Aotus_nancymaae
ENSPSIG00000016395	SNAI2	100	92.537	ENSANAG00000021163	SNAI2	100	92.537	Aotus_nancymaae
ENSPSIG00000016395	SNAI2	99	45.763	ENSBTAG00000017528	SNAI3	99	48.000	Bos_taurus
ENSPSIG00000016395	SNAI2	100	89.925	ENSBTAG00000013227	SNAI2	100	89.925	Bos_taurus
ENSPSIG00000016395	SNAI2	100	93.284	ENSCJAG00000013499	SNAI2	100	93.284	Callithrix_jacchus
ENSPSIG00000016395	SNAI2	99	47.766	ENSCAFG00000029458	SNAI3	99	47.260	Canis_familiaris
ENSPSIG00000016395	SNAI2	100	94.030	ENSCAFG00000006638	SNAI2	100	94.030	Canis_familiaris
ENSPSIG00000016395	SNAI2	100	94.030	ENSCAFG00020015384	SNAI2	100	94.030	Canis_lupus_dingo
ENSPSIG00000016395	SNAI2	99	48.110	ENSCAFG00020004719	SNAI3	99	47.603	Canis_lupus_dingo
ENSPSIG00000016395	SNAI2	100	89.552	ENSCHIG00000024410	SNAI2	100	89.552	Capra_hircus
ENSPSIG00000016395	SNAI2	99	45.902	ENSCHIG00000018087	SNAI3	99	46.284	Capra_hircus
ENSPSIG00000016395	SNAI2	90	93.361	ENSTSYG00000030892	SNAI2	90	93.361	Carlito_syrichta
ENSPSIG00000016395	SNAI2	53	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSPSIG00000016395	SNAI2	83	92.825	ENSCAPG00000013078	SNAI2	100	92.825	Cavia_aperea
ENSPSIG00000016395	SNAI2	100	93.284	ENSCCAG00000024100	SNAI2	100	93.284	Cebus_capucinus
ENSPSIG00000016395	SNAI2	99	49.320	ENSCATG00000031714	SNAI3	99	47.231	Cercocebus_atys
ENSPSIG00000016395	SNAI2	100	93.284	ENSCATG00000028656	SNAI2	100	93.284	Cercocebus_atys
ENSPSIG00000016395	SNAI2	100	93.284	ENSCLAG00000011797	SNAI2	100	93.284	Chinchilla_lanigera
ENSPSIG00000016395	SNAI2	100	93.284	ENSCSAG00000014787	SNAI2	100	93.284	Chlorocebus_sabaeus
ENSPSIG00000016395	SNAI2	100	99.627	ENSCPBG00000020255	SNAI2	100	99.627	Chrysemys_picta_bellii
ENSPSIG00000016395	SNAI2	99	52.703	ENSCPBG00000023474	SNAI3	99	52.703	Chrysemys_picta_bellii
ENSPSIG00000016395	SNAI2	50	65.672	ENSCSAVG00000009819	-	81	57.962	Ciona_savignyi
ENSPSIG00000016395	SNAI2	100	93.284	ENSCANG00000029656	SNAI2	100	93.284	Colobus_angolensis_palliatus
ENSPSIG00000016395	SNAI2	99	46.713	ENSCGRG00001011389	Snai3	99	46.713	Cricetulus_griseus_chok1gshd
ENSPSIG00000016395	SNAI2	100	92.164	ENSCGRG00001013674	Snai2	100	92.164	Cricetulus_griseus_chok1gshd
ENSPSIG00000016395	SNAI2	100	92.164	ENSCGRG00000012119	Snai2	100	92.164	Cricetulus_griseus_crigri
ENSPSIG00000016395	SNAI2	99	46.713	ENSCGRG00000014932	Snai3	99	46.713	Cricetulus_griseus_crigri
ENSPSIG00000016395	SNAI2	78	35.088	ENSDNOG00000035204	-	100	35.268	Dasypus_novemcinctus
ENSPSIG00000016395	SNAI2	100	91.045	ENSDORG00000029620	Snai2	100	91.045	Dipodomys_ordii
ENSPSIG00000016395	SNAI2	99	48.454	ENSECAG00000012131	SNAI3	99	47.213	Equus_caballus
ENSPSIG00000016395	SNAI2	100	82.836	ENSELUG00000021795	SNAI2	79	81.716	Esox_lucius
ENSPSIG00000016395	SNAI2	99	55.517	ENSELUG00000018742	-	99	55.017	Esox_lucius
ENSPSIG00000016395	SNAI2	99	45.620	ENSFCAG00000043885	SNAI3	99	45.848	Felis_catus
ENSPSIG00000016395	SNAI2	89	63.025	ENSFALG00000012974	-	98	65.546	Ficedula_albicollis
ENSPSIG00000016395	SNAI2	100	94.030	ENSFDAG00000016958	SNAI2	100	94.030	Fukomys_damarensis
ENSPSIG00000016395	SNAI2	100	99.627	ENSGAGG00000000426	SNAI2	100	99.627	Gopherus_agassizii
ENSPSIG00000016395	SNAI2	99	52.397	ENSGAGG00000023571	SNAI3	99	52.397	Gopherus_agassizii
ENSPSIG00000016395	SNAI2	100	93.284	ENSGGOG00000000959	SNAI2	100	93.284	Gorilla_gorilla
ENSPSIG00000016395	SNAI2	100	72.491	ENSHCOG00000019435	SNAI2	100	74.349	Hippocampus_comes
ENSPSIG00000016395	SNAI2	100	70.522	ENSIPUG00000000131	snai2	100	70.149	Ictalurus_punctatus
ENSPSIG00000016395	SNAI2	100	94.403	ENSSTOG00000028743	SNAI2	100	94.403	Ictidomys_tridecemlineatus
ENSPSIG00000016395	SNAI2	99	47.440	ENSJJAG00000019934	Snai3	99	46.622	Jaculus_jaculus
ENSPSIG00000016395	SNAI2	100	88.806	ENSLOCG00000005992	SNAI2	100	88.806	Lepisosteus_oculatus
ENSPSIG00000016395	SNAI2	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSPSIG00000016395	SNAI2	99	57.565	ENSLAFG00000005117	SNAI3	99	57.565	Loxodonta_africana
ENSPSIG00000016395	SNAI2	100	95.522	ENSLAFG00000009299	SNAI2	100	95.522	Loxodonta_africana
ENSPSIG00000016395	SNAI2	99	49.660	ENSMFAG00000032064	SNAI3	99	49.660	Macaca_fascicularis
ENSPSIG00000016395	SNAI2	100	93.284	ENSMFAG00000046061	SNAI2	100	93.284	Macaca_fascicularis
ENSPSIG00000016395	SNAI2	99	49.660	ENSMMUG00000008716	SNAI3	99	49.660	Macaca_mulatta
ENSPSIG00000016395	SNAI2	100	93.284	ENSMMUG00000016195	SNAI2	100	93.284	Macaca_mulatta
ENSPSIG00000016395	SNAI2	99	49.660	ENSMNEG00000045515	SNAI3	99	49.660	Macaca_nemestrina
ENSPSIG00000016395	SNAI2	100	93.284	ENSMNEG00000034216	SNAI2	100	93.284	Macaca_nemestrina
ENSPSIG00000016395	SNAI2	100	93.284	ENSMLEG00000034407	SNAI2	100	93.284	Mandrillus_leucophaeus
ENSPSIG00000016395	SNAI2	99	46.575	ENSMAUG00000001685	Snai3	99	46.154	Mesocricetus_auratus
ENSPSIG00000016395	SNAI2	100	91.791	ENSMAUG00000008119	Snai2	100	91.791	Mesocricetus_auratus
ENSPSIG00000016395	SNAI2	100	92.164	ENSMOCG00000006622	Snai2	100	92.164	Microtus_ochrogaster
ENSPSIG00000016395	SNAI2	100	95.896	ENSMODG00000010173	SNAI2	100	95.896	Monodelphis_domestica
ENSPSIG00000016395	SNAI2	100	91.450	MGP_CAROLIEiJ_G0020483	Snai2	100	91.450	Mus_caroli
ENSPSIG00000016395	SNAI2	100	91.450	ENSMUSG00000022676	Snai2	100	91.450	Mus_musculus
ENSPSIG00000016395	SNAI2	100	91.450	MGP_PahariEiJ_G0016188	Snai2	100	91.450	Mus_pahari
ENSPSIG00000016395	SNAI2	100	91.822	MGP_SPRETEiJ_G0021379	Snai2	100	91.822	Mus_spretus
ENSPSIG00000016395	SNAI2	100	94.776	ENSMPUG00000010793	SNAI2	100	94.776	Mustela_putorius_furo
ENSPSIG00000016395	SNAI2	99	48.611	ENSMPUG00000008104	SNAI3	99	48.611	Mustela_putorius_furo
ENSPSIG00000016395	SNAI2	100	92.537	ENSMLUG00000001086	SNAI2	100	92.537	Myotis_lucifugus
ENSPSIG00000016395	SNAI2	99	46.128	ENSNGAG00000023039	Snai3	99	48.148	Nannospalax_galili
ENSPSIG00000016395	SNAI2	99	49.320	ENSNLEG00000000595	SNAI3	99	50.000	Nomascus_leucogenys
ENSPSIG00000016395	SNAI2	100	93.284	ENSNLEG00000013421	SNAI2	100	93.284	Nomascus_leucogenys
ENSPSIG00000016395	SNAI2	97	96.169	ENSMEUG00000009510	SNAI2	100	96.169	Notamacropus_eugenii
ENSPSIG00000016395	SNAI2	100	95.522	ENSOANG00000007267	SNAI2	100	95.522	Ornithorhynchus_anatinus
ENSPSIG00000016395	SNAI2	99	49.477	ENSOGAG00000000419	SNAI3	99	48.475	Otolemur_garnettii
ENSPSIG00000016395	SNAI2	100	89.552	ENSOARG00000013030	SNAI2	100	89.552	Ovis_aries
ENSPSIG00000016395	SNAI2	99	48.299	ENSPPAG00000043301	SNAI3	99	46.488	Pan_paniscus
ENSPSIG00000016395	SNAI2	100	93.284	ENSPPAG00000015662	SNAI2	100	93.284	Pan_paniscus
ENSPSIG00000016395	SNAI2	99	46.520	ENSPPRG00000008511	SNAI3	99	46.209	Panthera_pardus
ENSPSIG00000016395	SNAI2	100	94.403	ENSPPRG00000012562	-	100	94.403	Panthera_pardus
ENSPSIG00000016395	SNAI2	90	94.628	ENSPTIG00000007593	SNAI2	77	94.628	Panthera_tigris_altaica
ENSPSIG00000016395	SNAI2	100	93.284	ENSPTRG00000020235	SNAI2	100	93.284	Pan_troglodytes
ENSPSIG00000016395	SNAI2	100	93.284	ENSPANG00000017540	SNAI2	100	93.284	Papio_anubis
ENSPSIG00000016395	SNAI2	99	49.660	ENSPANG00000000509	SNAI3	99	47.557	Papio_anubis
ENSPSIG00000016395	SNAI2	100	86.567	ENSPKIG00000002254	SNAI2	100	86.567	Paramormyrops_kingsleyae
ENSPSIG00000016395	SNAI2	99	54.325	ENSPKIG00000007872	SNAI3	99	54.671	Paramormyrops_kingsleyae
ENSPSIG00000016395	SNAI2	100	79.478	ENSPMGG00000013179	SNAI2	100	77.985	Periophthalmus_magnuspinnatus
ENSPSIG00000016395	SNAI2	100	91.791	ENSPEMG00000011739	Snai2	100	91.791	Peromyscus_maniculatus_bairdii
ENSPSIG00000016395	SNAI2	100	96.269	ENSPCIG00000025156	SNAI2	100	96.269	Phascolarctos_cinereus
ENSPSIG00000016395	SNAI2	90	80.579	ENSPREG00000008528	SNAI2	86	78.926	Poecilia_reticulata
ENSPSIG00000016395	SNAI2	100	93.284	ENSPPYG00000018578	SNAI2	100	93.284	Pongo_abelii
ENSPSIG00000016395	SNAI2	99	48.860	ENSPPYG00000007643	SNAI3	99	47.458	Pongo_abelii
ENSPSIG00000016395	SNAI2	100	94.776	ENSPCOG00000015656	SNAI2	100	94.776	Propithecus_coquereli
ENSPSIG00000016395	SNAI2	100	94.403	ENSPVAG00000009457	SNAI2	100	94.403	Pteropus_vampyrus
ENSPSIG00000016395	SNAI2	99	45.890	ENSRNOG00000013586	Snai3	99	47.797	Rattus_norvegicus
ENSPSIG00000016395	SNAI2	99	49.320	ENSRBIG00000025770	SNAI3	99	47.557	Rhinopithecus_bieti
ENSPSIG00000016395	SNAI2	100	93.284	ENSRBIG00000041133	SNAI2	100	93.284	Rhinopithecus_bieti
ENSPSIG00000016395	SNAI2	100	93.284	ENSRROG00000032273	SNAI2	100	93.284	Rhinopithecus_roxellana
ENSPSIG00000016395	SNAI2	99	47.231	ENSRROG00000032757	SNAI3	99	46.906	Rhinopithecus_roxellana
ENSPSIG00000016395	SNAI2	100	93.284	ENSSBOG00000035774	SNAI2	100	93.284	Saimiri_boliviensis_boliviensis
ENSPSIG00000016395	SNAI2	100	96.269	ENSSHAG00000004205	SNAI2	100	96.269	Sarcophilus_harrisii
ENSPSIG00000016395	SNAI2	99	50.825	ENSSFOG00015016115	snai3	93	50.662	Scleropages_formosus
ENSPSIG00000016395	SNAI2	100	85.556	ENSSFOG00015018025	SNAI2	100	85.556	Scleropages_formosus
ENSPSIG00000016395	SNAI2	100	97.761	ENSSPUG00000005427	-	100	97.761	Sphenodon_punctatus
ENSPSIG00000016395	SNAI2	100	91.045	ENSSSCG00000039568	SNAI2	100	91.045	Sus_scrofa
ENSPSIG00000016395	SNAI2	99	50.865	ENSUAMG00000020030	SNAI3	99	49.502	Ursus_americanus
ENSPSIG00000016395	SNAI2	86	94.783	ENSUAMG00000014942	SNAI2	100	94.783	Ursus_americanus
ENSPSIG00000016395	SNAI2	98	94.297	ENSUMAG00000006525	SNAI2	100	94.297	Ursus_maritimus
ENSPSIG00000016395	SNAI2	100	94.403	ENSVVUG00000017625	SNAI2	100	94.403	Vulpes_vulpes
ENSPSIG00000016395	SNAI2	99	48.797	ENSVVUG00000003233	SNAI3	99	48.454	Vulpes_vulpes
ENSPSIG00000016395	SNAI2	100	90.299	ENSXETG00000024006	snai2	100	90.299	Xenopus_tropicalis